chr4 : 180,674,718 180,675,552
834 bp 113 TFs 0 linked genes
This 834 bp open chromatin element has no linked target genes and is bound by 113 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:180,669,718 – 180,680,552
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
113 transcription factors
Source
Cell type
ASCL1 5 datasets
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 116 bp overlap
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 136 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 109 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 144 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 129 bp overlap
Ascl2 1 dataset
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
BACH2 2 datasets
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 427 bp overlap
ChIP OCI-Ly7 GSE44420.BACH2.OCI-Ly7 178 bp overlap
BCL6 1 dataset
ChIP OCI-Ly7 GSE44420.BCL6.OCI-Ly7 304 bp overlap
BRD4 10 datasets
ChIP MM1-S GSE43743.BRD4.MM1-S 706 bp overlap
ChIP MM1-S GSE45984.BRD4.MM1-S 540 bp overlap
ChIP MM1-S_DMSO GSE42161.BRD4.MM1-S_DMSO 834 bp overlap
ChIP MM1-S_JQ1_150NM GSE49224.BRD4.MM1-S_JQ1_150NM 787 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.BRD4.MM1-S_JQ1_500NM 708 bp overlap
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 797 bp overlap
ChIP MM1-S_JQ1_5NM GSE42355.BRD4.MM1-S_JQ1_5NM 834 bp overlap
ChIP MM1-S_JQ1_5UM GSE42355.BRD4.MM1-S_JQ1_5UM 665 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 278 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 269 bp overlap
CASZ1 1 dataset
ChIP rhabdomyosarcoma_Trametinib GSE126143.CASZ1.rhabdomyosarcoma_Trametinib 173 bp overlap
CDK8 2 datasets
ChIP MM1-S GSE43743.CDK8.MM1-S 334 bp overlap
ChIP MM1-S GSE43743.CDK8.MM1-S 118 bp overlap
CDK9 2 datasets
ChIP MM1-S_JQ1_5000NM GSE49224.CDK9.MM1-S_JQ1_5000NM 585 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 245 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 168 bp overlap
CTCF 1 dataset
ChIP islet ERP004003.CTCF.islet 152 bp overlap
DUX4 3 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 834 bp overlap
EOMES 2 datasets
Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 274 bp overlap
ERF::FOXI1 2 datasets
Motif DE_12h DE_12h-ERFFOXI1_MA1935.2 10 bp overlap
Motif DE_36h DE_36h-ERFFOXI1_MA1935.2 10 bp overlap
ERF::FOXO1 2 datasets
Motif DE_12h DE_12h-ERFFOXO1_MA1936.2 12 bp overlap
Motif DE_36h DE_36h-ERFFOXO1_MA1936.2 12 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 159 bp overlap
ESR1 9 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 521 bp overlap
ChIP Ishikawa_C2-14 GSE147141.ESR1.Ishikawa_C2-14 253 bp overlap
ChIP Ishikawa_E2 GSE109891.ESR1.Ishikawa_E2 102 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 398 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 237 bp overlap
ChIP Ishikawa_M1-9-1 GSE147141.ESR1.Ishikawa_M1-9-1 326 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 320 bp overlap
ChIP Ishikawa_siETV4-96h GSE129803.ESR1.Ishikawa_siETV4-96h 218 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 378 bp overlap
ETV2 3 datasets
Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap
Motif DE_24h DE_24h-ETV2_MA0762.2 9 bp overlap
Motif DE_36h DE_36h-ETV2_MA0762.2 9 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FLI1 4 datasets
ChIP A-673 GSE99959.FLI1.A-673 235 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 341 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 249 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 219 bp overlap
FLI1::FOXI1 2 datasets
Motif DE_12h DE_12h-FLI1FOXI1_MA1950.2 11 bp overlap
Motif DE_36h DE_36h-FLI1FOXI1_MA1950.2 11 bp overlap
FOXA2 1 dataset
Motif DE_36h DE_36h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif DE_36h DE_36h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap
FOXC1 1 dataset
Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap
FOXC2 1 dataset
Motif DE_36h DE_36h-FOXC2_MA0846.2 11 bp overlap
FOXI1 1 dataset
Motif DE_36h DE_36h-FOXI1_MA0042.2 7 bp overlap
FOXJ2::ELF1 2 datasets
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
Motif DE_36h DE_36h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXN3 1 dataset
Motif DE_36h DE_36h-FOXN3_MA1489.1 8 bp overlap
FOXO1::ELK3 3 datasets
Motif DE_12h DE_12h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_24h DE_24h-FOXO1ELK3_MA1955.2 13 bp overlap
Motif DE_36h DE_36h-FOXO1ELK3_MA1955.2 13 bp overlap
FOXP1 2 datasets
Motif DE_36h DE_36h-FOXP1_MA0481.4 7 bp overlap
ChIP U2932 ERP010999.FOXP1.U2932 734 bp overlap
FOXP2 2 datasets
Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap
Motif DE_36h DE_36h-FOXP2_MA0593.2 9 bp overlap
FOXP4 1 dataset
Motif DE_36h DE_36h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif DE_36h DE_36h-FOXS1_MA2118.1 8 bp overlap
Foxj3 1 dataset
Motif DE_36h DE_36h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap
GATA3 1 dataset
ChIP Jurkat GSE76181.GATA3.Jurkat 178 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 722 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 740 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 326 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 787 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 710 bp overlap
GRHL1 3 datasets
Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap
Motif DE_24h DE_24h-GRHL1_MA0647.2 10 bp overlap
Motif DE_36h DE_36h-GRHL1_MA0647.2 10 bp overlap
HAND2 1 dataset
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 197 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 301 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 248 bp overlap
HOXB4 3 datasets
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap
Motif DE_36h DE_36h-HOXB4_MA1499.2 6 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 288 bp overlap
HOXC4 3 datasets
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap
Motif DE_36h DE_36h-HOXC4_MA1504.2 6 bp overlap
HOXD4 3 datasets
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap
Motif DE_36h DE_36h-HOXD4_MA1507.2 6 bp overlap
IKZF1 5 datasets
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_12h DE_12h-IKZF1_MA1508.2 8 bp overlap
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
Motif DE_36h DE_36h-IKZF1_MA1508.2 8 bp overlap
JUN 3 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 630 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 248 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 593 bp overlap
MAFB 1 dataset
ChIP islet ERP004003.MAFB.islet 408 bp overlap
MAFK 2 datasets
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 505 bp overlap
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 215 bp overlap
MED1 7 datasets
ChIP MM1-S_JQ1 GSE42161.MED1.MM1-S_JQ1 834 bp overlap
ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 232 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 176 bp overlap
ChIP MM1-S_JQ1_500NM GSE42355.MED1.MM1-S_JQ1_500NM 298 bp overlap
ChIP MM1-S_JQ1_50NM GSE49224.MED1.MM1-S_JQ1_50NM 760 bp overlap
ChIP MM1-S_JQ1_5NM GSE49224.MED1.MM1-S_JQ1_5NM 834 bp overlap
ChIP RH4 GSE83726.MED1.RH4 397 bp overlap
MGA 1 dataset
Motif DE_36h DE_36h-MGA_MA0801.1 8 bp overlap
MSC 3 datasets
Motif DE_12h DE_12h-MSC_MA0665.1 10 bp overlap
Motif DE_24h DE_24h-MSC_MA0665.1 10 bp overlap
Motif DE_36h DE_36h-MSC_MA0665.1 10 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 307 bp overlap
MYB 1 dataset
ChIP Loucy GSE94000.MYB.Loucy 834 bp overlap
MYC 1 dataset
ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 175 bp overlap
MYOD1 5 datasets
ChIP RD GSE137168.MYOD1.RD 168 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 259 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 209 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 198 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 173 bp overlap
MYOG 3 datasets
ChIP RH4 GSE83726.MYOG.RH4 221 bp overlap
ChIP RH4_DMSO-6H GSE116344.MYOG.RH4_DMSO-6H 195 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 207 bp overlap
NCOR2 1 dataset
ChIP LS180 GSE39277.NCOR2.LS180 74 bp overlap
NFATC3 1 dataset
Motif DE_36h DE_36h-NFATC3_MA0625.3 6 bp overlap
NFATC4 1 dataset
Motif DE_36h DE_36h-NFATC4_MA1525.3 9 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 791 bp overlap
NOTCH1 3 datasets
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 106 bp overlap
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 140 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 827 bp overlap
NR2C1 1 dataset
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 574 bp overlap
Nfat5 1 dataset
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_36h DE_36h-Nfatc1_MA0624.3 6 bp overlap
Nfatc2 1 dataset
Motif DE_36h DE_36h-Nfatc2_MA0152.3 8 bp overlap
Nr1H2 1 dataset
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 1 dataset
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 1 dataset
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
PAX4 1 dataset
Motif DE_36h DE_36h-PAX4_MA0068.2 8 bp overlap
PDX1 1 dataset
ChIP islet ERP001456.PDX1.islet 247 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU3F1 2 datasets
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap
POU5F1 1 dataset
Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap
Ptf1A 1 dataset
Motif DE_36h DE_36h-Ptf1A_MA1620.2 8 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 123 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 404 bp overlap
RBPJ 1 dataset
ChIP MUTUL GSE75503.RBPJ.MUTUL 500 bp overlap
REL 1 dataset
ChIP Ramos GSE139810.REL.Ramos 272 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 834 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 794 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 666 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 799 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 761 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 564 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 267 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 603 bp overlap
SOX10 2 datasets
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
Motif DE_36h DE_36h-SOX10_MA0442.3 6 bp overlap
TBR1 1 dataset
Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_36h DE_36h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_36h DE_36h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_36h DE_36h-TBX18_MA1565.2 9 bp overlap
TBX2 2 datasets
Motif DE_36h DE_36h-TBX2_MA0688.2 9 bp overlap
ChIP Kelly GSE94822.TBX2.Kelly 141 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_36h DE_36h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap
TBX4 1 dataset
Motif DE_36h DE_36h-TBX4_MA0806.1 8 bp overlap
TBX5 1 dataset
Motif DE_36h DE_36h-TBX5_MA0807.1 8 bp overlap
TCF3 1 dataset
ChIP Ramos GSE139810.TCF3.Ramos 834 bp overlap
TCF4 2 datasets
ChIP CAL-1 GSE76147.TCF4.CAL-1 143 bp overlap
ChIP GEN2-2 GSE76147.TCF4.GEN2-2 130 bp overlap
TFCP2 3 datasets
Motif DE_12h DE_12h-TFCP2_MA1968.2 9 bp overlap
Motif DE_24h DE_24h-TFCP2_MA1968.2 9 bp overlap
Motif DE_36h DE_36h-TFCP2_MA1968.2 9 bp overlap
TP53 1 dataset
ChIP H9_mesoderm GSE142050.TP53.H9_mesoderm 379 bp overlap
Tbx6 1 dataset
Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap
YY1 3 datasets
ChIP ALL GSE145549.YY1.ALL 220 bp overlap
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 164 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 135 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF652 1 dataset
Motif DE_36h DE_36h-ZNF652_MA1657.2 9 bp overlap
ZNF680 1 dataset
Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap