chr4 : 40,176,514 – 40,176,932
418 bp 86 TFs 1 linked gene
This 418 bp open chromatin element is linked to ENSG00000260296 and is bound by 86 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000260296 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:40,171,514 – 40,181,932
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 268 bp overlap
ChIP K562 ENCFF938UXQ 320 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 59 bp overlap
ATF7 4 datasets
ChIP K-562 ENCSR972ZBV.ATF7.K-562 379 bp overlap
ChIP K562 ENCFF308SKS 403 bp overlap
ChIP K562 ENCFF308SKS 356 bp overlap
ChIP K562 ENCFF308SKS 156 bp overlap
Ahr::Arnt 1 dataset
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 192 bp overlap
BRD4 3 datasets
ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 203 bp overlap
ChIP OCI-Ly1_DMSO GSE53601.BRD4.OCI-Ly1_DMSO 109 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 319 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 265 bp overlap
ChIP K562 ENCFF739JDE 303 bp overlap
ChIP K562 ENCFF775HUO 351 bp overlap
ChIP K562 ENCFF775HUO 418 bp overlap
E2F4 2 datasets
ChIP Hep-G2 ENCSR924LSO.E2F4.Hep-G2 162 bp overlap
ChIP HepG2 ENCFF311TOD 332 bp overlap
E2F6 6 datasets
ChIP H1 ENCFF785DWK 183 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 287 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 141 bp overlap
ChIP K562 ENCFF136LTS 140 bp overlap
ChIP K562 ENCFF163WMT 271 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 245 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 369 bp overlap
EHF 1 dataset
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
ELF1 3 datasets
Motif DE_12h DE_12h-ELF1_MA0473.4 9 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 176 bp overlap
ChIP K562 ENCFF496AKI 239 bp overlap
ELF3 1 dataset
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
ETV1 1 dataset
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 319 bp overlap
Erg 1 dataset
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
FOXJ2::ELF1 1 dataset
Motif DE_12h DE_12h-FOXJ2ELF1_MA1952.2 11 bp overlap
FOXO1::ELF1 1 dataset
Motif DE_12h DE_12h-FOXO1ELF1_MA1953.2 13 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 251 bp overlap
FOXS1 1 dataset
Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap
GABPA 4 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
ChIP K-562 ENCSR290MUH.GABPA.K-562 224 bp overlap
ChIP K562 ENCFF139LXS 418 bp overlap
ChIP K562 ENCFF139LXS 266 bp overlap
GABPB1 2 datasets
ChIP K-562 ENCSR138YYY.GABPB1.K-562 277 bp overlap
ChIP K562 ENCFF015GDS 356 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 199 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 104 bp overlap
GATAD2B 1 dataset
ChIP K562 ENCFF696VMK 295 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 254 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 355 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 267 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 347 bp overlap
ChIP K562 ENCFF919OMP 418 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR563YDA.HDGF.K-562 96 bp overlap
HSF1 1 dataset
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 56 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 418 bp overlap
ChIP K562 ENCFF348IBL 418 bp overlap
ChIP K562 ENCFF771OHZ 272 bp overlap
IKZF2 1 dataset
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 87 bp overlap
Ikzf3 1 dataset
Motif DE_12h DE_12h-Ikzf3_MA1992.2 9 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 226 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 418 bp overlap
ChIP K562 ENCFF320EQC 184 bp overlap
LIN54 3 datasets
Motif DE_12h DE_12h-LIN54_MA0619.2 7 bp overlap
ChIP Hep-G2 ENCSR597MCV.LIN54.Hep-G2 381 bp overlap
ChIP HepG2 ENCFF662XDE 240 bp overlap
MAX 6 datasets
ChIP H1 ENCFF914VQY 116 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 406 bp overlap
ChIP K562 ENCFF398VJM 327 bp overlap
ChIP K562 ENCFF524IJO 193 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 186 bp overlap
ChIP WTC11 ENCFF223QFY 374 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 342 bp overlap
ChIP K562 ENCFF140CEX 213 bp overlap
MNT 1 dataset
ChIP K-562 ENCSR390VGH.MNT.K-562 189 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR914NEI.MTA3.K-562 223 bp overlap
ChIP K-562 ENCSR180NCY.MTA3.K-562 194 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 193 bp overlap
MYC 2 datasets
ChIP K-562 ENCSR000EGJ.MYC.K-562 418 bp overlap
ChIP K-562 ENCSR000EZU.MYC.K-562 225 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 290 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR798ILC.NCOR1.K-562 333 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 256 bp overlap
NELFE 2 datasets
ChIP K-562_HS GSE112379.NELFE.K-562_HS 178 bp overlap
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 155 bp overlap
NR1I2 1 dataset
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
NR1I3 1 dataset
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
NRF1 1 dataset
ChIP K562 ENCFF791UHF 313 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 181 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF137JSF 376 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 201 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 174 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 251 bp overlap
PRDM10 2 datasets
ChIP K-562 ENCSR120MPG.PRDM10.K-562 231 bp overlap
ChIP K562 ENCFF740YLK 123 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 170 bp overlap
RNF2 2 datasets
ChIP K562 ENCFF653BQJ 385 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 105 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 161 bp overlap
SKIL 1 dataset
ChIP K-562 ENCSR336DXE.SKIL.K-562 288 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 418 bp overlap
ChIP K562 ENCFF506JCB 418 bp overlap
ChIP K562 ENCFF506JCB 274 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 217 bp overlap
SMARCC2 1 dataset
ChIP K-562 ENCSR519WMW.SMARCC2.K-562 225 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 370 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 192 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
TBP 1 dataset
ChIP K-562 GSE55306.TBP.K-562 205 bp overlap
TFDP1 3 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
ChIP K-562 ENCSR017GBO.TFDP1.K-562 127 bp overlap
ChIP K562 ENCFF584VSB 322 bp overlap
TFDP2 1 dataset
ChIP Hep-G2 ENCSR069JKP.TFDP2.Hep-G2 109 bp overlap
VEZF1 2 datasets
ChIP K562 ENCFF053XDV 418 bp overlap
ChIP K562 ENCFF053XDV 242 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 310 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 367 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 322 bp overlap
ZEB2 1 dataset
ChIP K-562 ENCSR004GKA.ZEB2.K-562 241 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF143 1 dataset
ChIP K-562 GSE39263.ZNF143.K-562 215 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 290 bp overlap
ZNF232 1 dataset
ChIP WTC11 ENCFF901BGD 346 bp overlap
ZNF263 1 dataset
Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap
ZNF431 1 dataset
ChIP K562 ENCFF431VZH 398 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 395 bp overlap
ChIP K562 ENCFF547OSS 418 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 372 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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