chr3 : 39,443,612 39,443,834
222 bp 74 TFs 1 linked gene
This 222 bp open chromatin element is linked to ENSG00000286781 and is bound by 74 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000286781 4.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:39,438,612 – 39,448,834
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 222 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 160 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 211 bp overlap
ATF4 1 dataset
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 113 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 114 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 87 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 180 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 219 bp overlap
CEBPG 1 dataset
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 120 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 118 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 137 bp overlap
CTCF 324 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 222 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 222 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 222 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 221 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 222 bp overlap
ChIP A-549 ENCSR000BHW.CTCF.A-549 121 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 142 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 222 bp overlap
ChIP A549 ENCFF034FVO 222 bp overlap
ChIP A549 ENCFF182TCQ 123 bp overlap
ChIP A549 ENCFF434LUY 219 bp overlap
ChIP AG04450 ENCFF116DJL 214 bp overlap
ChIP BE2C ENCFF757SRF 222 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 216 bp overlap
ChIP BJ ENCSR000DQI.CTCF.BJ 153 bp overlap
ChIP COLO-829 GSE81945.CTCF.COLO-829 222 bp overlap
ChIP Caco-2 ENCFF934QYS 208 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 167 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 203 bp overlap
ChIP D721Med ENCFF513FYD 205 bp overlap
Motif DE_12h DE_12h-CTCF_MA1930.2 33 bp overlap
ChIP DND-41 ENCFF913MRA 222 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 181 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 219 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 165 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 222 bp overlap
ChIP GM12865 ENCFF067GFI 222 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 118 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 123 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 139 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 115 bp overlap
ChIP GM12878 ENCFF485TGR 222 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 122 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 108 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 222 bp overlap
ChIP GM23338 ENCFF531QOI 197 bp overlap
ChIP GM23338 ENCFF772DML 200 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 184 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 211 bp overlap
ChIP H1 ENCFF764RHO 189 bp overlap
ChIP H54 ENCFF255TVO 107 bp overlap
ChIP H9 ENCFF152GTF 222 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 222 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 169 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 203 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 206 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 222 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 222 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 222 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 222 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 221 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 222 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 216 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 222 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 222 bp overlap
ChIP HCT-116 ENCSR000BSE.CTCF.HCT-116 183 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 196 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 222 bp overlap
ChIP HCT116 ENCFF003KHP 222 bp overlap
ChIP HCT116 ENCFF209YMI 222 bp overlap
ChIP HCT116 ENCFF373YMA 222 bp overlap
ChIP HEK293 ENCFF498RMM 211 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 165 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 220 bp overlap
ChIP HFFc6 ENCFF005CJI 222 bp overlap
ChIP HFFc6 ENCFF005CJI 176 bp overlap
ChIP HL-60 ENCSR000DUP.CTCF.HL-60 133 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 133 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 222 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 222 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 222 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 221 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 221 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 169 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 174 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 202 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCFF626XQK 221 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 222 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 190 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 162 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 222 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 222 bp overlap
ChIP HeLa-S3_synchro GSE108173.CTCF.HeLa-S3_synchro 178 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 222 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 209 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 221 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 215 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 211 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 209 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 199 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 196 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 194 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF127KUP 214 bp overlap
ChIP HepG2 ENCFF194VBQ 97 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 163 bp overlap
ChIP ID00014 GSE76922.CTCF.ID00014 166 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 148 bp overlap
ChIP IMR-90 ENCSR000EFI.CTCF.IMR-90 204 bp overlap
ChIP IMR-90 GSE43070.CTCF.IMR-90 119 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 222 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 222 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 175 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 202 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 189 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 200 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 203 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 175 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 119 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 93 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 123 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 99 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 129 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 222 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 177 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 140 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 222 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 182 bp overlap
ChIP K562 ENCFF082GOI 81 bp overlap
ChIP K562 ENCFF111MGE 222 bp overlap
ChIP K562 ENCFF400DFR 222 bp overlap
ChIP K562 ENCFF430KTH 222 bp overlap
ChIP K562 ENCFF598YSU 219 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 167 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 166 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 222 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 221 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 222 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 122 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 188 bp overlap
ChIP Loucy ENCFF359TVQ 178 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 222 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 222 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 222 bp overlap
ChIP MCF-7 ENCFF139NQI 105 bp overlap
ChIP MCF-7 ENCFF162GNE 127 bp overlap
ChIP MCF-7 ENCFF198DQX 188 bp overlap
ChIP MCF-7 ENCFF210JUZ 207 bp overlap
ChIP MCF-7 ENCFF414SZG 179 bp overlap
ChIP MCF-7 ENCFF424NQR 200 bp overlap
ChIP MCF-7 ENCFF494VXA 188 bp overlap
ChIP MCF-7 ENCFF844STM 198 bp overlap
ChIP MCF-7 ENCFF954TUV 187 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 222 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 221 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 210 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 208 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 183 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 197 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 222 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 222 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 222 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 222 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 222 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 222 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 222 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.CTCF.MCF-7_E2_SHCTCF 120 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 222 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 222 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 219 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 160 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 222 bp overlap
ChIP MIA-PaCa-2 GSE88734.CTCF.MIA-PaCa-2 194 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 192 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 115 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 222 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 203 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 222 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 222 bp overlap
ChIP PC-3 ENCFF487TUI 222 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 222 bp overlap
ChIP Panc1 ENCFF056JQX 222 bp overlap
ChIP Panc1 ENCFF056JQX 222 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 172 bp overlap
ChIP RWPE2 ENCFF911IEE 222 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 109 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 149 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 142 bp overlap
ChIP SK-N-SH ENCFF731NJX 222 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 153 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 138 bp overlap
ChIP SUM159 GSE46055.CTCF.SUM159 128 bp overlap
ChIP SiHa GSE143026.CTCF.SiHa 175 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 222 bp overlap
ChIP T-47D ENCSR000BNO.CTCF.T-47D 160 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 176 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 222 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 222 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 222 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 172 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 222 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 222 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 204 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 213 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 222 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 222 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 159 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 222 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 222 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 177 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 222 bp overlap
ChIP VCaP ENCFF858YQT 222 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 171 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 168 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 222 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 202 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 214 bp overlap
ChIP WI38 ENCFF841AXJ 222 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 170 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 222 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 136 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 196 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 156 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 206 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 222 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 126 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 222 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 170 bp overlap
ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 219 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 222 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 172 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF235CPK 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF267VHH 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 222 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF812HQJ 208 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 222 bp overlap
ChIP endodermal cell ENCFF471YCZ 222 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 197 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 206 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 208 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 222 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 177 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 222 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 222 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 210 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 192 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 222 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 179 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 222 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 140 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 222 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 222 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 209 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 222 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 173 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 184 bp overlap
ChIP fibroblast of dermis ENCFF986DNJ 76 bp overlap
ChIP fibroblast of lung ENCFF356FDN 222 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 222 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 222 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 222 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 190 bp overlap
ChIP fibroblast_DERMAL ENCSR000APM.CTCF.fibroblast_DERMAL 180 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 197 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 164 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 112 bp overlap
ChIP fibroblast_LUNG ENCSR000ANO.CTCF.fibroblast_LUNG 221 bp overlap
ChIP fibroblast_MAMMARY ENCSR000DUU.CTCF.fibroblast_MAMMARY 109 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 190 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 216 bp overlap
ChIP foreskin fibroblast ENCFF219EBQ 222 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 222 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 222 bp overlap
ChIP hESC GSE20650.CTCF.hESC 132 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 222 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 197 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 222 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 222 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 125 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 222 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 201 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 123 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 222 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 202 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 222 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 130 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 202 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 222 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 222 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 222 bp overlap
ChIP keratinocyte ENCFF046PBT 110 bp overlap
ChIP keratinocyte ENCFF291YDC 119 bp overlap
ChIP keratinocyte ENCFF667ULX 222 bp overlap
ChIP keratinocyte ENCFF805QIE 222 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 222 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 222 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 222 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 184 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 222 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 159 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 212 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 218 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 222 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 175 bp overlap
ChIP myoblast_skeletal_muscle ENCSR000ANE.CTCF.myoblast_skeletal_muscle 180 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 157 bp overlap
ChIP neural progenitor cell ENCFF420RBO 222 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 220 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 202 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 222 bp overlap
ChIP parathyroid adenoma ENCFF173CEN 222 bp overlap
ChIP parathyroid adenoma ENCFF173NJK 144 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 200 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 160 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 156 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 130 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 222 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 222 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 222 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 222 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 222 bp overlap
CTCFL 4 datasets
ChIP K-562 ENCSR000BNK.CTCFL.K-562 126 bp overlap
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 127 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 212 bp overlap
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 189 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 220 bp overlap
E2F6 1 dataset
Motif DE_12h DE_12h-E2F6_MA0471.3 8 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 192 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 136 bp overlap
ESR1 11 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 222 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 222 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 222 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 222 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 222 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 222 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 222 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 222 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 222 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 222 bp overlap
ChIP MCF-7_IL1b_IKK7 GSE67295.ESR1.MCF-7_IL1b_IKK7 66 bp overlap
ESRRA 2 datasets
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 209 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 222 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
EZH2 2 datasets
ChIP ProEs GSE59087.EZH2.ProEs 176 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 75 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 167 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 163 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 128 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HLF 1 dataset
Motif DE_12h DE_12h-HLF_MA0043.4 9 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 221 bp overlap
JUN 3 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 222 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 222 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 126 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 132 bp overlap
MCM3 1 dataset
ChIP K-562 ENCSR990AZC.MCM3.K-562 115 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS GSE60270.MED1.MCF-7_SHRARS 188 bp overlap
NFIL3 1 dataset
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
NRIP1 2 datasets
ChIP MCF-7 ERP005838.NRIP1.MCF-7 172 bp overlap
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 164 bp overlap
PAX9 1 dataset
Motif DE_12h DE_12h-PAX9_MA0781.2 16 bp overlap
PGR 1 dataset
ChIP MCF-7_R5020 GSE68355.PGR.MCF-7_R5020 179 bp overlap
PLAG1 1 dataset
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
POU2F1 2 datasets
ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 96 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 218 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 219 bp overlap
PRDM9 1 dataset
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
RAD21 49 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 143 bp overlap
ChIP A549 ENCFF047SFC 214 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 133 bp overlap
ChIP H1 ENCFF698EWO 162 bp overlap
ChIP H1 ENCFF967OJF 121 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 222 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 200 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 169 bp overlap
ChIP HCT116 ENCFF568PEO 222 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 222 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 222 bp overlap
ChIP HeLa-S3_CTCF-s-OE GSE108869.RAD21.HeLa-S3_CTCF-s-OE 220 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 222 bp overlap
ChIP Hep-G2 ERP000209.RAD21.Hep-G2 166 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 166 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 169 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 215 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 189 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 115 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 165 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 127 bp overlap
ChIP K562 ENCFF066JWO 222 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 176 bp overlap
ChIP MCF-7 ENCFF694KOM 147 bp overlap
ChIP MCF-7 ENCFF724VCQ 222 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 222 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 199 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 214 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 218 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 215 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 190 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.RAD21.MCF-7_E2_SHCTCF 144 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 178 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 222 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 178 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 222 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 222 bp overlap
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 140 bp overlap
ChIP hiPSC_HUES9 GSE106870.RAD21.hiPSC_HUES9 133 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 191 bp overlap
ChIP hiPSC_IB7 GSE106870.RAD21.hiPSC_IB7 194 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 222 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 191 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 222 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 222 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 214 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 214 bp overlap
RBM39 1 dataset
ChIP K-562 ENCSR764OXF.RBM39.K-562 163 bp overlap
RELA 1 dataset
ChIP 786-O GSE86092.RELA.786-O 60 bp overlap
SIN3A 1 dataset
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 132 bp overlap
SMAD1 2 datasets
ChIP BG03 GSE36578.SMAD1.BG03 114 bp overlap
ChIP CD34_PROG_BMP GSE29194.SMAD1.CD34_PROG_BMP 146 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 124 bp overlap
ChIP BG03 GSE36578.SMAD3.BG03 154 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 222 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 193 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 222 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 205 bp overlap
SMC1A 5 datasets
ChIP A-549 GSE76893.SMC1A.A-549 210 bp overlap
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 199 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 218 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 191 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 222 bp overlap
SMC1A-B 1 dataset
ChIP Kelly_shLUC-res GSE115248.SMC1A-B.Kelly_shLUC-res 137 bp overlap
SMC3 3 datasets
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 196 bp overlap
ChIP K-562 ENCSR000EGW.SMC3.K-562 161 bp overlap
ChIP hESC_D0 GSE116862.SMC3.hESC_D0 142 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 217 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
STAG1 9 datasets
ChIP HCAEC GSE101921.STAG1.HCAEC 222 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 207 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 207 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 208 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 193 bp overlap
ChIP HepG2 ENCFF843EBZ 222 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 222 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 220 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 118 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 222 bp overlap
TARDBP 1 dataset
ChIP K-562 GSE120104.TARDBP.K-562 100 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 188 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
ChIP K-562 ENCSR000BNN.THAP1.K-562 146 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 222 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 171 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 153 bp overlap
ZKSCAN3 1 dataset
Motif DE_12h DE_12h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF143 2 datasets
ChIP MCF-7 GSE76454.ZNF143.MCF-7 207 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 159 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR117WTM.ZNF24.K-562 150 bp overlap
ZNF530 1 dataset
Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap
ZNF701 1 dataset
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap