chr2 : 222,312,029 222,312,621
592 bp 79 TFs 2 linked genes
This 592 bp open chromatin element is linked to CT75 and ENSG00000288658 and is bound by 79 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CT75 5.7 kb Proximal Proximity
ENSG00000288658 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:222,307,029 – 222,317,621
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP MCF-7 GSE144036.AFF4.MCF-7 96 bp overlap
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 308 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 380 bp overlap
AR 2 datasets
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 320 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 299 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 235 bp overlap
ARNTL 1 dataset
ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 203 bp overlap
ASH2L 4 datasets
ChIP H1 ENCFF399KAM 549 bp overlap
ChIP H1 ENCFF399KAM 445 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 376 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 131 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 397 bp overlap
BRD4 5 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 200 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 370 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 132 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 282 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 254 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 183 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 542 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 442 bp overlap
ChIP H1 ENCFF095JHA 409 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 171 bp overlap
CHD1 2 datasets
ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 230 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 386 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 209 bp overlap
CREB1 3 datasets
ChIP GM23338 ENCFF432ZEW 167 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 115 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 117 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 176 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 256 bp overlap
CTCF 5 datasets
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 348 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 161 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 144 bp overlap
ChIP erythroid GSE67783.CTCF.erythroid 273 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 208 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 592 bp overlap
ELF1 1 dataset
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 478 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 190 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 282 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 324 bp overlap
ESR1 5 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 470 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 413 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 479 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 395 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 226 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 205 bp overlap
EZH1 3 datasets
ChIP ProEs GSE59087.EZH1.ProEs 228 bp overlap
ChIP ProEs_SHCTR GSE59087.EZH1.ProEs_SHCTR 154 bp overlap
ChIP ProEs_SHEZH2 GSE59087.EZH1.ProEs_SHEZH2 190 bp overlap
EZH2 31 datasets
ChIP B-cell ENCSR000AUZ.EZH2.B-cell 534 bp overlap
ChIP GM23248 ENCFF404ZHM 236 bp overlap
ChIP GM23338 ENCFF613YON 592 bp overlap
ChIP GM23338 ENCFF886DXX 282 bp overlap
ChIP GM23338 ENCFF886DXX 282 bp overlap
ChIP H1 ENCFF232NZA 592 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 592 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 450 bp overlap
ChIP ProEs GSE59087.EZH2.ProEs 196 bp overlap
ChIP SK-N-SH ENCFF657FZK 191 bp overlap
ChIP astrocyte ENCFF365JTP 592 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 592 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 592 bp overlap
ChIP fibroblast of lung ENCFF479BAW 452 bp overlap
ChIP fibroblast of lung ENCFF479BAW 373 bp overlap
ChIP hESC GSE113817.EZH2.hESC 498 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 204 bp overlap
ChIP hepatocyte ENCFF118DKH 74 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 592 bp overlap
ChIP keratinocyte ENCFF070STK 411 bp overlap
ChIP keratinocyte ENCFF070STK 503 bp overlap
ChIP keratinocyte ENCFF070STK 293 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 130 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 448 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 592 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 592 bp overlap
ChIP neural progenitor cell ENCFF472NFV 592 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 290 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 307 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 252 bp overlap
FOXA1 3 datasets
ChIP LS180 GSE140533.FOXA1.LS180 53 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 81 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 259 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 360 bp overlap
FOXJ3 1 dataset
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 153 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 308 bp overlap
HDAC2 2 datasets
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 110 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 244 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 235 bp overlap
HIF1A 1 dataset
ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 284 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 336 bp overlap
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 339 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 121 bp overlap
JUN 4 datasets
ChIP 786-O GSE86092.JUN.786-O 60 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 173 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 246 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 145 bp overlap
KDM4A 1 dataset
ChIP H1 ENCFF078LED 310 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 237 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 153 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MYC 1 dataset
ChIP U2OS_SHMYC GSE77356.MYC.U2OS_SHMYC 113 bp overlap
MYCN 3 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 322 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 361 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 145 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 297 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 157 bp overlap
NFATC3 1 dataset
ChIP Hep-G2 GSE97661.NFATC3.Hep-G2 206 bp overlap
NFKB1 1 dataset
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BJR.NR3C1.A-549 142 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 358 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 311 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 342 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 300 bp overlap
PBX3 1 dataset
Motif ES_0h ES_0h-PBX3_MA1114.2 11 bp overlap
POLR2A 1 dataset
ChIP sigmoid colon ENCFF725QFT 203 bp overlap
POU5F1 6 datasets
ChIP BG03 GSE21614.POU5F1.BG03 196 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 137 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 592 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 334 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 247 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 367 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 248 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 418 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 215 bp overlap
RBM39 1 dataset
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 216 bp overlap
RELA 1 dataset
ChIP HEK293_15min GSE89017.RELA.HEK293_15min 325 bp overlap
RNF2 7 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 322 bp overlap
ChIP H1 ENCFF239FFS 592 bp overlap
ChIP H1 ENCFF239FFS 592 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 391 bp overlap
ChIP NCCIT GSE71675.RNF2.NCCIT 260 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 154 bp overlap
ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 194 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 403 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 372 bp overlap
RUNX1 2 datasets
ChIP AML_Blast GSE60130.RUNX1.AML_Blast 175 bp overlap
ChIP CD34 GSE64862.RUNX1.CD34 175 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 257 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 307 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 359 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 130 bp overlap
SMARCA4 3 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 430 bp overlap
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 158 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 451 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 441 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 343 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 103 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 266 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 285 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 211 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 259 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 273 bp overlap
SUZ12 15 datasets
ChIP GM12878 ENCFF498QAM 371 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 592 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 403 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 592 bp overlap
ChIP K-562 ENCSR000AUC.SUZ12.K-562 377 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 71 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 285 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 575 bp overlap
ChIP NT2/D1 ENCFF574SXS 75 bp overlap
ChIP NT2/D1 ENCFF574SXS 576 bp overlap
ChIP NT2/D1 ENCFF574SXS 185 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 592 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 222 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 196 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 310 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 321 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 583 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 592 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 257 bp overlap
THRA 1 dataset
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 237 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 324 bp overlap
ZIC4 1 dataset
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZNF574 1 dataset
Motif ES_0h ES_0h-ZNF574_MA1982.2 14 bp overlap