chr2 : 167,275,088 167,275,472
384 bp 132 TFs 0 linked genes
This 384 bp open chromatin element has no linked target genes and is bound by 132 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:167,270,088 – 167,280,472
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
132 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 308 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 269 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 137 bp overlap
BARX1 1 dataset
Motif ES_0h ES_0h-BARX1_MA0875.2 6 bp overlap
BARX2 2 datasets
Motif DE_12h DE_12h-BARX2_MA1471.2 9 bp overlap
Motif ES_0h ES_0h-BARX2_MA1471.2 9 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 333 bp overlap
BRD4 2 datasets
ChIP HUVEC-C GSE60171.BRD4.HUVEC-C 226 bp overlap
ChIP hESC GSE33281.BRD4.hESC 96 bp overlap
BRF1 1 dataset
ChIP H9_Activin GSE94418.BRF1.H9_Activin 140 bp overlap
BSX 1 dataset
Motif ES_0h ES_0h-BSX_MA0876.2 6 bp overlap
Bach1::Mafk 2 datasets
Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap
Motif ES_0h ES_0h-Bach1Mafk_MA0591.2 12 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 133 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 148 bp overlap
CHD7 2 datasets
ChIP H1 ENCFF126NLU 183 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 259 bp overlap
CREB1 2 datasets
ChIP GM23338 ENCFF432ZEW 254 bp overlap
ChIP GM23338 ENCSR214ZAV.CREB1.GM23338 278 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 266 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 174 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
Crx 2 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif ES_0h ES_0h-Crx_MA0467.3 6 bp overlap
DLX1 1 dataset
Motif ES_0h ES_0h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif ES_0h ES_0h-DLX6_MA0882.2 6 bp overlap
Dlx2 1 dataset
Motif ES_0h ES_0h-Dlx2_MA0885.3 8 bp overlap
Dlx3 1 dataset
Motif ES_0h ES_0h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif ES_0h ES_0h-Dlx4_MA0881.2 6 bp overlap
Dlx5 1 dataset
Motif ES_0h ES_0h-Dlx5_MA1476.3 8 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 252 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 149 bp overlap
ELF3 1 dataset
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
EP300 1 dataset
ChIP hESC GSE17917.EP300.hESC 384 bp overlap
ETV1 1 dataset
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 356 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 127 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 354 bp overlap
GBX2 1 dataset
Motif ES_0h ES_0h-GBX2_MA0890.2 6 bp overlap
GLI3 2 datasets
Motif DE_12h DE_12h-GLI3_MA1491.3 15 bp overlap
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 320 bp overlap
GSC 2 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif ES_0h ES_0h-GSC_MA0648.2 6 bp overlap
GSC2 2 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif ES_0h ES_0h-GSC2_MA0891.2 6 bp overlap
Gli2 2 datasets
Motif DE_12h DE_12h-Gli2_MA0734.4 9 bp overlap
Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap
HESX1 1 dataset
Motif ES_0h ES_0h-HESX1_MA0894.2 6 bp overlap
HOXA6 1 dataset
Motif ES_0h ES_0h-HOXA6_MA1497.2 7 bp overlap
HOXA7 1 dataset
Motif ES_0h ES_0h-HOXA7_MA1498.3 6 bp overlap
HOXB6 1 dataset
Motif ES_0h ES_0h-HOXB6_MA1500.2 7 bp overlap
HOXB7 1 dataset
Motif ES_0h ES_0h-HOXB7_MA1501.2 7 bp overlap
HOXB8 1 dataset
Motif ES_0h ES_0h-HOXB8_MA1502.2 7 bp overlap
HOXD8 1 dataset
Motif ES_0h ES_0h-HOXD8_MA0910.3 7 bp overlap
Hmx1 1 dataset
Motif ES_0h ES_0h-Hmx1_MA0896.2 9 bp overlap
Hmx2 2 datasets
Motif DE_12h DE_12h-Hmx2_MA0897.2 15 bp overlap
Motif ES_0h ES_0h-Hmx2_MA0897.2 15 bp overlap
IKZF2 1 dataset
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif ES_0h ES_0h-Ikzf3_MA1992.2 9 bp overlap
JUN 1 dataset
ChIP ESC S34-ESC-d0-JUN-exp2 332 bp overlap
KDM1A 1 dataset
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 141 bp overlap
LBX2 1 dataset
Motif ES_0h ES_0h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif ES_0h ES_0h-LHX2_MA0700.3 6 bp overlap
LIN54 1 dataset
Motif ES_0h ES_0h-LIN54_MA0619.2 7 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 205 bp overlap
MEIS1 1 dataset
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MITF 1 dataset
Motif ES_0h ES_0h-MITF_MA0620.4 10 bp overlap
MSX1 1 dataset
Motif ES_0h ES_0h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif ES_0h ES_0h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
Msx3 1 dataset
Motif ES_0h ES_0h-Msx3_MA0709.2 6 bp overlap
NANOG 11 datasets
ChIP GM23338 ENCFF065NZG 189 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 357 bp overlap
ChIP H1 ENCFF747ZPQ 241 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 384 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 384 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 301 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 384 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 384 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 384 bp overlap
ChIP hESC GSE20650.NANOG.hESC 292 bp overlap
ChIP hESC GSE18292.NANOG.hESC 251 bp overlap
NFIC::TLX1 2 datasets
Motif DE_12h DE_12h-NFICTLX1_MA0119.1 14 bp overlap
Motif ES_0h ES_0h-NFICTLX1_MA0119.1 14 bp overlap
NFIL3 2 datasets
Motif DE_12h DE_12h-NFIL3_MA0025.3 9 bp overlap
Motif ES_0h ES_0h-NFIL3_MA0025.3 9 bp overlap
NIPBL 2 datasets
ChIP WA09_heat-shock GSE105028.NIPBL.WA09_heat-shock 331 bp overlap
ChIP hESC_WNT3A GSE64758.NIPBL.hESC_WNT3A 183 bp overlap
NKX2-2 1 dataset
Motif ES_0h ES_0h-NKX2-2_MA1645.2 8 bp overlap
NKX2-5 1 dataset
Motif ES_0h ES_0h-NKX2-5_MA0063.3 7 bp overlap
Nobox 1 dataset
Motif ES_0h ES_0h-Nobox_MA0125.2 6 bp overlap
OTX1 2 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif ES_0h ES_0h-OTX1_MA0711.2 6 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 259 bp overlap
PHOX2B 1 dataset
Motif ES_0h ES_0h-PHOX2B_MA0681.3 12 bp overlap
PITX1 2 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif ES_0h ES_0h-PITX1_MA0682.3 6 bp overlap
PITX3 2 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif ES_0h ES_0h-PITX3_MA0714.2 6 bp overlap
PKNOX2 1 dataset
Motif ES_0h ES_0h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 2 datasets
ChIP GM23338 ENCFF450WCS 361 bp overlap
ChIP H1 ENCFF566JSR 384 bp overlap
POU1F1 2 datasets
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
Motif ES_0h ES_0h-POU1F1_MA0784.3 14 bp overlap
POU2F1 2 datasets
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F2 2 datasets
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap
POU2F3 3 datasets
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 306 bp overlap
POU3F1 2 datasets
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
Motif ES_0h ES_0h-POU3F1_MA0786.2 10 bp overlap
POU3F2 2 datasets
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
Motif ES_0h ES_0h-POU3F2_MA0787.1 12 bp overlap
POU3F3 2 datasets
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
Motif ES_0h ES_0h-POU3F3_MA0788.1 13 bp overlap
POU3F4 2 datasets
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap
POU5F1 14 datasets
Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 143 bp overlap
ChIP H1 ENCFF698ZAP 205 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 384 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 236 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 249 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 290 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 374 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 361 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 378 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 384 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 384 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 348 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 306 bp overlap
POU5F1B 2 datasets
Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PRDM9 4 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Motif ES_0h ES_0h-PRDM9_MA1723.2 20 bp overlap
Prdm5 2 datasets
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap
RAD21 2 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 384 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 276 bp overlap
RAX 1 dataset
Motif ES_0h ES_0h-RAX_MA0718.2 6 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 123 bp overlap
RFX1 2 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RHOXF1 2 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif ES_0h ES_0h-RHOXF1_MA0719.2 6 bp overlap
SMAD2 3 datasets
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 310 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 179 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 318 bp overlap
SMAD3 2 datasets
ChIP BG03 GSE21614.SMAD3.BG03 235 bp overlap
ChIP BG03_DIFF_0H GSE36578.SMAD3.BG03_DIFF_0H 295 bp overlap
SMARCA4 3 datasets
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 384 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 384 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 384 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 192 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 359 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 260 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 384 bp overlap
SOX13 1 dataset
Motif ES_0h ES_0h-SOX13_MA1120.2 7 bp overlap
SOX2 6 datasets
Motif ES_0h ES_0h-SOX2_MA0143.5 7 bp overlap
ChIP H9 GSE46837.SOX2.H9 238 bp overlap
ChIP hESC GSE69479.SOX2.hESC 216 bp overlap
ChIP hESC GSE18292.SOX2.hESC 217 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 381 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 158 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 285 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 156 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 134 bp overlap
SRY 2 datasets
Motif DE_12h DE_12h-SRY_MA0084.2 7 bp overlap
Motif ES_0h ES_0h-SRY_MA0084.2 7 bp overlap
STAT1 1 dataset
Motif ES_0h ES_0h-STAT1_MA0137.4 9 bp overlap
STAT3 1 dataset
Motif ES_0h ES_0h-STAT3_MA0144.3 9 bp overlap
Sox3 1 dataset
Motif ES_0h ES_0h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif ES_0h ES_0h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif ES_0h ES_0h-Sox6_MA0515.1 10 bp overlap
Stat4 1 dataset
Motif ES_0h ES_0h-Stat4_MA0518.2 10 bp overlap
TBP 2 datasets
ChIP hESC_10h GSE122298.TBP.hESC_10h 110 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 137 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 348 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 316 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 212 bp overlap
TEF 2 datasets
Motif DE_12h DE_12h-TEF_MA0843.2 10 bp overlap
Motif ES_0h ES_0h-TEF_MA0843.2 10 bp overlap
TFE3 1 dataset
Motif ES_0h ES_0h-TFE3_MA0831.3 10 bp overlap
TFEB 1 dataset
Motif ES_0h ES_0h-TFEB_MA0692.2 8 bp overlap
TFEC 1 dataset
Motif ES_0h ES_0h-TFEC_MA0871.3 8 bp overlap
TGIF2 1 dataset
Motif ES_0h ES_0h-TGIF2_MA0797.1 12 bp overlap
TP53 2 datasets
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 331 bp overlap
ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 227 bp overlap
TRIM28 2 datasets
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 131 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 198 bp overlap
USF1 3 datasets
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 167 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 144 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 203 bp overlap
YY1 2 datasets
ChIP H1 ENCFF524BTL 268 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 186 bp overlap
ZMAT4 1 dataset
ChIP WTC11 ENCFF608UXZ 241 bp overlap
ZNF114 1 dataset
ChIP GM23338 ENCFF631OSW 259 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 384 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 251 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 299 bp overlap
ZNF532 1 dataset
ChIP WTC11 ENCFF373VBX 220 bp overlap
ZNF549 2 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF680 1 dataset
Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap