chr2 : 119,480,901 119,481,081
180 bp 75 TFs 1 linked gene
This 180 bp open chromatin element is linked to SCTR-AS1 and is bound by 75 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SCTR-AS1 4.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:119,475,901 – 119,486,081
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
75 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 59 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 71 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 180 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
BHLHE40 1 dataset
ChIP K562 ENCFF923NJI 180 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD3.K-562_DMSO-IFNG 109 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 177 bp overlap
BRD4 5 datasets
ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 180 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 145 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 126 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 120 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 180 bp overlap
CBFB 1 dataset
ChIP Hep-G2 ENCSR479RZV.CBFB.Hep-G2 112 bp overlap
CREB1 1 dataset
ChIP HepG2 ENCFF245CBB 128 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 180 bp overlap
CTCF 4 datasets
ChIP HepG2 ENCFF757EKU 180 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 123 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 163 bp overlap
ChIP K562 ENCFF400DFR 180 bp overlap
DMAP1 1 dataset
ChIP Hep-G2 ENCSR670YPQ.DMAP1.Hep-G2 139 bp overlap
E2F3 2 datasets
ChIP K-562 ENCSR036QIR.E2F3.K-562 180 bp overlap
ChIP K562 ENCFF922ILX 164 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 115 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 68 bp overlap
FOXP4 1 dataset
ChIP Hep-G2 ENCSR232LLP.FOXP4.Hep-G2 123 bp overlap
GATA1 5 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 93 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 180 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 175 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 180 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 180 bp overlap
GATA2 3 datasets
ChIP Hep-G2 ENCSR897LDT.GATA2.Hep-G2 116 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 180 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 173 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-2 180 bp overlap
ChIP foregut GSE117136.GATA4.foregut 180 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 180 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 180 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 153 bp overlap
ChIP DE DE-GATA6-2 180 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 180 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 180 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 180 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 180 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 180 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 180 bp overlap
ChIP HUG1N GSE51936.GATA6.HUG1N 125 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 111 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 180 bp overlap
ChIP foregut GSE117136.GATA6.foregut 180 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 180 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 180 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 159 bp overlap
HNF4A 3 datasets
ChIP Hep-G2 ENCSR469FBY.HNF4A.Hep-G2 180 bp overlap
ChIP Hep-G2 ENCSR000BLF.HNF4A.Hep-G2 116 bp overlap
ChIP HepG2 ENCFF146SSF 180 bp overlap
HNRNPL 4 datasets
ChIP Hep-G2 GSE120104.HNRNPL.Hep-G2 180 bp overlap
ChIP Hep-G2 ENCSR315JJE.HNRNPL.Hep-G2 180 bp overlap
ChIP HepG2 ENCFF671UYF 180 bp overlap
ChIP HepG2 ENCFF684GAM 180 bp overlap
HOXA3 2 datasets
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 108 bp overlap
ChIP HepG2 ENCFF374TCI 180 bp overlap
IRF1 2 datasets
ChIP K-562 GSE129380.IRF1.K-562 113 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 180 bp overlap
KDM1A 1 dataset
ChIP K-562 GSE117944.KDM1A.K-562 180 bp overlap
KDM4B 1 dataset
ChIP K-562 ENCSR642VZY.KDM4B.K-562 135 bp overlap
KLF16 1 dataset
ChIP K-562 ENCSR760UVO.KLF16.K-562 150 bp overlap
MAZ 2 datasets
ChIP K-562 ENCSR000EFX.MAZ.K-562 154 bp overlap
ChIP K562 ENCFF333ZIV 180 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 180 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 180 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 180 bp overlap
MYCN 1 dataset
ChIP SHEP-21N_DOX_24H GSE80151.MYCN.SHEP-21N_DOX_24H 157 bp overlap
MYNN 1 dataset
ChIP K-562 ENCSR737LTZ.MYNN.K-562 123 bp overlap
NFKB2 1 dataset
ChIP HepG2 ENCFF165NTY 180 bp overlap
PHF8 1 dataset
ChIP Hep-G2 ENCSR604VAE.PHF8.Hep-G2 129 bp overlap
POLR2A 3 datasets
ChIP body of pancreas ENCFF501FEC 180 bp overlap
ChIP body of pancreas ENCFF675RCN 180 bp overlap
ChIP body of pancreas ENCFF727UBE 180 bp overlap
PROX1 2 datasets
ChIP HepG2 ENCFF016ZJS 180 bp overlap
ChIP HepG2 ENCFF016ZJS 178 bp overlap
RAD21 3 datasets
ChIP HepG2 ENCFF906QIS 180 bp overlap
ChIP K562 ENCFF066JWO 180 bp overlap
ChIP K562 ENCFF634XYR 180 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 138 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 142 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 180 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR076YPO.RNF2.K-562 134 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 180 bp overlap
SP4 1 dataset
ChIP HepG2 ENCFF865DSQ 84 bp overlap
SP5 2 datasets
ChIP Hep-G2 ENCSR019NPF.SP5.Hep-G2 179 bp overlap
ChIP HepG2 ENCFF931FHV 180 bp overlap
SRF 1 dataset
ChIP K-562 ENCSR000BLK.SRF.K-562 114 bp overlap
SRSF1 2 datasets
ChIP Hep-G2 GSE120104.SRSF1.Hep-G2 99 bp overlap
ChIP HepG2 ENCFF666RVW 180 bp overlap
STAG1 3 datasets
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 155 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 140 bp overlap
ChIP HepG2 ENCFF843EBZ 180 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 180 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 142 bp overlap
TARDBP 2 datasets
ChIP K-562 GSE120104.TARDBP.K-562 171 bp overlap
ChIP K-562 ENCSR429XTR.TARDBP.K-562 170 bp overlap
TBX2 1 dataset
ChIP Hep-G2 ENCSR410FEH.TBX2.Hep-G2 91 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 180 bp overlap
TFAP4 2 datasets
ChIP HepG2 ENCFF932XOY 180 bp overlap
ChIP K562 ENCFF727PXG 180 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 180 bp overlap
ZFP36 2 datasets
ChIP K-562 ENCSR776CYN.ZFP36.K-562 180 bp overlap
ChIP K562 ENCFF255RZG 128 bp overlap
ZFP91 1 dataset
ChIP HepG2 ENCFF012CME 180 bp overlap
ZFX 1 dataset
ChIP K-562 ENCSR920ASP.ZFX.K-562 85 bp overlap
ZFY 1 dataset
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 180 bp overlap
ZNF257 3 datasets
ChIP HEK293T GSE78099.ZNF257.HEK293T 180 bp overlap
ChIP K-562 ENCSR492FKD.ZNF257.K-562 180 bp overlap
ChIP K562 ENCFF849YZP 129 bp overlap
ZNF263 4 datasets
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 180 bp overlap
ChIP HepG2 ENCFF626SSV 180 bp overlap
ChIP K-562 ENCSR000EWN.ZNF263.K-562 180 bp overlap
ChIP K562 ENCFF640RNA 180 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 180 bp overlap
ZNF341 1 dataset
ChIP HEK293 ENCFF944VMC 180 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 180 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 180 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 180 bp overlap
ChIP HepG2 ENCFF653WIX 137 bp overlap
ZNF770 2 datasets
ChIP Hep-G2 ENCSR510GKB.ZNF770.Hep-G2 174 bp overlap
ChIP HepG2 ENCFF233UVH 180 bp overlap