chr21 : 42,969,207 42,969,585
378 bp 81 TFs 1 linked gene
This 378 bp open chromatin element is linked to PKNOX1 and is bound by 81 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PKNOX1 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:42,964,207 – 42,974,585
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K562 ENCFF938UXQ 241 bp overlap
ARID3B 1 dataset
ChIP K562 ENCFF224SWC 288 bp overlap
ATF1 2 datasets
ChIP K562 ENCFF817JQF 378 bp overlap
ChIP K562 ENCFF817JQF 378 bp overlap
ATF4 1 dataset
ChIP K562 ENCFF030XBX 301 bp overlap
ATF7 2 datasets
ChIP K562 ENCFF308SKS 378 bp overlap
ChIP K562 ENCFF308SKS 202 bp overlap
BRD4 2 datasets
ChIP K-562_iBET GSE138084.BRD4.K-562_iBET 195 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 125 bp overlap
CAVIN1 1 dataset
ChIP K562 ENCFF731YBD 307 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 118 bp overlap
CREB3 1 dataset
ChIP K562 ENCFF985QJI 340 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 378 bp overlap
CXXC5 1 dataset
ChIP K562 ENCFF497CZN 378 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 111 bp overlap
ChIP BLaER1 ENCFF335XTP 214 bp overlap
DMBX1 1 dataset
ChIP K562 ENCFF972HXB 355 bp overlap
DPF2 2 datasets
ChIP K562 ENCFF739JDE 329 bp overlap
ChIP K562 ENCFF775HUO 283 bp overlap
E2F3 1 dataset
ChIP K562 ENCFF922ILX 308 bp overlap
E2F5 1 dataset
ChIP K562 ENCFF688PUB 378 bp overlap
ELF4 1 dataset
ChIP K562 ENCFF200OMJ 304 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 356 bp overlap
ChIP DE DE-FOXA2-2 378 bp overlap
GATA1 6 datasets
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 118 bp overlap
ChIP K562 ENCFF094CMK 224 bp overlap
ChIP erythroblast ENCFF867JAR 378 bp overlap
ChIP erythroblast ENCFF867JAR 203 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 375 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 118 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 352 bp overlap
ChIP DE DE-GATA4-2 378 bp overlap
ChIP foregut GSE117136.GATA4.foregut 314 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 358 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 309 bp overlap
GATA6 18 datasets
ChIP AGS GSE51705.GATA6.AGS 284 bp overlap
ChIP AGS GSE51936.GATA6.AGS 96 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 146 bp overlap
ChIP DE DE-GATA6-1 377 bp overlap
ChIP DE DE-GATA6-2 378 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 342 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 375 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 263 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 263 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 126 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 314 bp overlap
ChIP foregut GSE117136.GATA6.foregut 296 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 258 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 308 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 356 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 337 bp overlap
GMEB1 1 dataset
ChIP K562 ENCFF705LHX 378 bp overlap
HDAC1 1 dataset
ChIP K562 ENCFF928TKZ 378 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 177 bp overlap
ChIP K562 ENCFF744ALD 363 bp overlap
HDAC8 1 dataset
ChIP K562 ENCFF784HCJ 374 bp overlap
HINFP 1 dataset
ChIP K562 ENCFF361QXJ 283 bp overlap
HNRNPLL 4 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 202 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 199 bp overlap
ChIP K562 ENCFF541ZGX 378 bp overlap
ChIP K562 ENCFF598PWW 378 bp overlap
HSF4 1 dataset
ChIP K562 ENCFF158CQE 291 bp overlap
ID3 1 dataset
ChIP K562 ENCFF170RNI 378 bp overlap
IFI16 1 dataset
ChIP K562 ENCFF291QSI 257 bp overlap
JUND 1 dataset
ChIP K562 ENCFF830LVJ 240 bp overlap
KDM1A 1 dataset
ChIP K562 ENCFF128TYE 378 bp overlap
KLF6 2 datasets
ChIP K-562 ENCSR297CGF.KLF6.K-562 167 bp overlap
ChIP K562 ENCFF948QSP 289 bp overlap
MECOM 1 dataset
ChIP K562 ENCFF773RGL 311 bp overlap
MEF2D 2 datasets
ChIP K-562 ENCSR647ZXA.MEF2D.K-562 195 bp overlap
ChIP K562 ENCFF392LDT 317 bp overlap
MTA2 1 dataset
ChIP K562 ENCFF441KCP 378 bp overlap
MTF1 1 dataset
ChIP K562 ENCFF811XMB 318 bp overlap
NR2C1 1 dataset
ChIP K562 ENCFF568JLK 368 bp overlap
NR4A1 2 datasets
ChIP K-562 ENCSR130PDE.NR4A1.K-562 233 bp overlap
ChIP K562 ENCFF998LHF 356 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 285 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 378 bp overlap
PRDM10 3 datasets
ChIP HEK293 ENCFF145WQQ 296 bp overlap
ChIP HEK293 ENCFF145WQQ 81 bp overlap
ChIP K562 ENCFF740YLK 245 bp overlap
PTTG1 1 dataset
ChIP K562 ENCFF017KRM 313 bp overlap
RCOR1 1 dataset
ChIP K562 ENCFF216EEJ 236 bp overlap
RELA 2 datasets
ChIP K562 ENCFF892SPR 378 bp overlap
ChIP K562 ENCFF892SPR 260 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 378 bp overlap
SHOX2 1 dataset
ChIP K-562 ENCSR184IQF.SHOX2.K-562 192 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 331 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 378 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 378 bp overlap
SMAD3 1 dataset
ChIP K562 ENCFF885DQE 265 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 378 bp overlap
SMARCA4 2 datasets
ChIP K562 ENCFF506JCB 378 bp overlap
ChIP K562 ENCFF506JCB 206 bp overlap
SMARCE1 2 datasets
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 182 bp overlap
ChIP K562 ENCFF690CFF 378 bp overlap
TBX18 1 dataset
ChIP K562 ENCFF473CJK 340 bp overlap
TCF15 1 dataset
ChIP K562 ENCFF099NVR 295 bp overlap
TCFL5 1 dataset
ChIP K562 ENCFF187XYP 261 bp overlap
TEAD1 4 datasets
ChIP HepG2 ENCFF661PNM 323 bp overlap
ChIP K562 ENCFF254RJL 378 bp overlap
ChIP K562 ENCFF465AQA 289 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 142 bp overlap
TEAD3 1 dataset
ChIP HepG2 ENCFF054UUL 287 bp overlap
TEAD4 2 datasets
ChIP HepG2 ENCFF250NXO 266 bp overlap
ChIP K562 ENCFF673NIK 99 bp overlap
TSHZ1 1 dataset
ChIP K562 ENCFF289XHG 277 bp overlap
VEZF1 1 dataset
ChIP K562 ENCFF053XDV 378 bp overlap
YY1 2 datasets
ChIP K562 ENCFF660QRE 311 bp overlap
ChIP NT2/D1 ENCFF999MII 322 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF215OUF 378 bp overlap
ZBTB9 1 dataset
ChIP K562 ENCFF233EFX 351 bp overlap
ZEB2 2 datasets
ChIP K562 ENCFF795CMH 361 bp overlap
ChIP K562 ENCFF975RXS 369 bp overlap
ZNF197 1 dataset
ChIP K562 ENCFF872BAU 378 bp overlap
ZNF257 1 dataset
ChIP K562 ENCFF849YZP 261 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 378 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 378 bp overlap
ZNF397 1 dataset
ChIP K562 ENCFF203WSD 257 bp overlap
ZNF41 1 dataset
ChIP K562 ENCFF693FMG 277 bp overlap
ZNF583 1 dataset
ChIP K562 ENCFF879KXH 338 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 254 bp overlap
ChIP K562 ENCFF547OSS 378 bp overlap
ZNF639 1 dataset
ChIP K562 ENCFF271FQR 378 bp overlap
ZNF668 1 dataset
ChIP K562 ENCFF112IUE 300 bp overlap
ZNF740 1 dataset
ChIP K562 ENCFF447IXE 378 bp overlap
ZNF76 1 dataset
ChIP K562 ENCFF267KQX 256 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 378 bp overlap
ZNF79 1 dataset
ChIP K562 ENCFF558WWN 292 bp overlap