chr21 : 27,371,638 27,372,247
609 bp 66 TFs 0 linked genes
This 609 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:27,366,638 – 27,377,247
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
BATF3 2 datasets
ChIP KK-1_BirA GSE94732.BATF3.KK-1_BirA 187 bp overlap
ChIP ST-1_BirA GSE94732.BATF3.ST-1_BirA 147 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 224 bp overlap
BRD2 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801 187 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_JQ1_MGSK2801_rDNA 187 bp overlap
BRD4 10 datasets
ChIP HFOB_DIFF GSE82295.BRD4.HFOB_DIFF 153 bp overlap
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 178 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 178 bp overlap
ChIP MDA-MB-231_JQ1 GSE116879.BRD4.MDA-MB-231_JQ1 160 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 418 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 442 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 442 bp overlap
ChIP MDA-MB-231_JQ1_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_rDNA 160 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 319 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 319 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1 GSE116879.BRD9.MDA-MB-231_JQ1 128 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 227 bp overlap
CDK8 1 dataset
ChIP myometrium_PT967 GSE128230.CDK8.myometrium_PT967 59 bp overlap
CEBPB 3 datasets
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 210 bp overlap
ChIP HeLa-S3 ENCFF722WEG 202 bp overlap
ChIP IMR-90 ENCFF468UGY 179 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 139 bp overlap
CREB5 2 datasets
ChIP SK-N-SH ENCFF144PMI 345 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR758GOA.CREB5.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 609 bp overlap
CREBBP 2 datasets
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 368 bp overlap
ChIP fibroblast_senescent GSE106146.CREBBP.fibroblast_senescent 174 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 161 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 235 bp overlap
EP300 6 datasets
ChIP HeLa-S3 ENCSR000ECV.EP300.HeLa-S3 131 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 291 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 105 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 254 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 523 bp overlap
ChIP neural cell ENCFF442QNK 231 bp overlap
ESRRG 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR023KKB.ESRRG.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 171 bp overlap
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 301 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 303 bp overlap
ETV1 1 dataset
ChIP COLO-800 GSE80443.ETV1.COLO-800 325 bp overlap
FOS 3 datasets
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 101 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 150 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 271 bp overlap
FOSL2 1 dataset
ChIP SK-N-SH ENCFF127ZDW 171 bp overlap
FOXA1 1 dataset
ChIP LNCaP_M253K GSE133386.FOXA1.LNCaP_M253K 157 bp overlap
FOXA2 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 347 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 185 bp overlap
ChIP DE DE-FOXA2-1 440 bp overlap
ChIP DE DE-FOXA2-2 316 bp overlap
FOXF1 1 dataset
ChIP GIST48_siETV1 GSE106624.FOXF1.GIST48_siETV1 183 bp overlap
FOXL2 7 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 609 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 594 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 299 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 187 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 299 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 242 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 609 bp overlap
GATA2 9 datasets
ChIP ESF GSE108408.GATA2.ESF 609 bp overlap
ChIP dermal-fibroblast GSE51025.GATA2.dermal-fibroblast 171 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 543 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 324 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 325 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 562 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 583 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P1 609 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 609 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 224 bp overlap
GATA4 17 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 328 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 190 bp overlap
ChIP DE DE-GATA4-1 402 bp overlap
ChIP DE DE-GATA4-2 512 bp overlap
ChIP G296S GSE85628.GATA4.G296S 582 bp overlap
ChIP G296S_2 GSE85628.GATA4.G296S_2 582 bp overlap
ChIP G296S_4 GSE85628.GATA4.G296S_4 609 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 220 bp overlap
ChIP cardiomyocyte GSE85628.GATA4.cardiomyocyte 239 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 217 bp overlap
ChIP cardiomyocyte_1 GSE85628.GATA4.cardiomyocyte_1 243 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 541 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 144 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 234 bp overlap
ChIP foregut GSE117136.GATA4.foregut 512 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 309 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 432 bp overlap
GATA6 15 datasets
ChIP AGS GSE51705.GATA6.AGS 200 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 208 bp overlap
ChIP DE DE-GATA6-1 429 bp overlap
ChIP DE DE-GATA6-2 446 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 609 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 452 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 379 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 609 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 485 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 609 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 214 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 476 bp overlap
ChIP foregut GSE117136.GATA6.foregut 375 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 492 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 446 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 174 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 431 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 477 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 609 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 469 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 477 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 147 bp overlap
JUND 3 datasets
ChIP HeLa-S3 ENCFF642OHL 219 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 158 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 99 bp overlap
LHX2 2 datasets
ChIP retina_pigment GSE60024.LHX2.retina_pigment 281 bp overlap
ChIP retina_pigment GSE60024.LHX2.retina_pigment 200 bp overlap
MAX 2 datasets
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 213 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 317 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 478 bp overlap
MXI1 1 dataset
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 159 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 216 bp overlap
MYCN 4 datasets
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 262 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 248 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 239 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 234 bp overlap
NEUROD1 1 dataset
ChIP D283-Med GSE92582.NEUROD1.D283-Med 237 bp overlap
NFE2 1 dataset
ChIP K-562 ENCSR552YGL.NFE2.K-562 132 bp overlap
NFE2L2 3 datasets
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 177 bp overlap
ChIP IMR-90 ENCFF059WEE 207 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 174 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 218 bp overlap
NR2F2 1 dataset
ChIP liver ENCSR338MMB.NR2F2.liver 267 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 147 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 239 bp overlap
OTX2 1 dataset
ChIP retina_pigment GSE60024.OTX2.retina_pigment 250 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 190 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 220 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 379 bp overlap
RAD21 1 dataset
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 141 bp overlap
RELA 18 datasets
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 253 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 189 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 265 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 160 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 218 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 199 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 186 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 250 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 179 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 228 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 205 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 232 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 145 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 149 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 219 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 246 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 239 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 161 bp overlap
SMAD2-3 1 dataset
ChIP HGrC1_WT-TGF GSE138496.SMAD2-3.HGrC1_WT-TGF 57 bp overlap
SMARCA2 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 280 bp overlap
SMARCA4 1 dataset
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 200 bp overlap
SMARCC1 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCC1.SK-N-MC_shEWSFLI1 184 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 251 bp overlap
STAT3 1 dataset
ChIP HeLa-S3 ENCSR000EDC.STAT3.HeLa-S3 221 bp overlap
TBX5 3 datasets
ChIP G296S GSE85628.TBX5.G296S 94 bp overlap
ChIP G296S_2 GSE85628.TBX5.G296S_2 94 bp overlap
ChIP hiPSC GSE81585.TBX5.hiPSC 318 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 332 bp overlap
TEAD1 3 datasets
ChIP HEK293_siE1A GSE130135.TEAD1.HEK293_siE1A 122 bp overlap
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 463 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 258 bp overlap
TEAD4 2 datasets
ChIP MDA-MB-231 GSE66081.TEAD4.MDA-MB-231 238 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 147 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 353 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 190 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 235 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 353 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH ENCFF981MBE 321 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF777 1 dataset
ChIP HEK293T GSE78099.ZNF777.HEK293T 403 bp overlap