chr20 : 42,980,525 42,981,624
1,099 bp 138 TFs 0 linked genes
This 1.1 kb open chromatin element has no linked target genes and is bound by 138 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:42,975,525 – 42,986,624
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
138 transcription factors
Source
Cell type
ARNT2 1 dataset
Motif DE_72h DE_72h-ARNT2_MA1464.2 8 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 316 bp overlap
Arnt 1 dataset
Motif DE_72h DE_72h-Arnt_MA0004.1 6 bp overlap
Arntl 1 dataset
Motif DE_72h DE_72h-Arntl_MA0603.2 8 bp overlap
Atoh1 2 datasets
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
Motif DE_72h DE_72h-Atoh1_MA1467.3 7 bp overlap
BCL11A 1 dataset
Motif DE_72h DE_72h-BCL11A_MA2324.1 7 bp overlap
BHLHE41 1 dataset
Motif DE_72h DE_72h-BHLHE41_MA0636.1 10 bp overlap
Bcl11B 1 dataset
Motif DE_72h DE_72h-Bcl11B_MA1989.2 9 bp overlap
CEBPG 1 dataset
Motif DE_72h DE_72h-CEBPG_MA1636.2 10 bp overlap
CHD7 1 dataset
ChIP WA01 ENCSR000AVA.CHD7.WA01 159 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF896HSY 222 bp overlap
DMRTA2 1 dataset
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 121 bp overlap
EBF3 1 dataset
Motif DE_72h DE_72h-EBF3_MA1637.2 9 bp overlap
EZH2 6 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 348 bp overlap
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 503 bp overlap
ChIP DND41 ENCSR000ASW.EZH2.DND41 328 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 210 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 137 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
Ebf2 1 dataset
Motif DE_72h DE_72h-Ebf2_MA1604.2 9 bp overlap
Elf5 2 datasets
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
Motif DE_72h DE_72h-Elf5_MA0136.4 8 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 739 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 1089 bp overlap
ChIP DE DE-FOXA2-2 1096 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 688 bp overlap
FOXD3 1 dataset
Motif DE_72h DE_72h-FOXD3_MA0041.3 14 bp overlap
FOXS1 1 dataset
Motif DE_72h DE_72h-FOXS1_MA2118.1 8 bp overlap
Foxl2 1 dataset
Motif DE_72h DE_72h-Foxl2_MA1607.2 10 bp overlap
Foxn1 1 dataset
Motif DE_72h DE_72h-Foxn1_MA1684.1 6 bp overlap
Foxq1 1 dataset
Motif DE_72h DE_72h-Foxq1_MA0040.2 10 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 471 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 983 bp overlap
ChIP DE DE-GATA4-2 998 bp overlap
ChIP foregut GSE117136.GATA4.foregut 762 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 1097 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 1002 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 928 bp overlap
ChIP DE DE-GATA6-2 938 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 389 bp overlap
ChIP foregut GSE117136.GATA6.foregut 900 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 1000 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 569 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 1048 bp overlap
GFI1 1 dataset
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GLI3 1 dataset
Motif DE_72h DE_72h-GLI3_MA1491.3 15 bp overlap
Gfi1B 1 dataset
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
Gli1 1 dataset
Motif DE_72h DE_72h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif DE_72h DE_72h-Gli2_MA0734.4 9 bp overlap
HAND2 2 datasets
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
Motif DE_72h DE_72h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 209 bp overlap
HIF1A 1 dataset
Motif DE_72h DE_72h-HIF1A_MA1106.2 6 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 178 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 178 bp overlap
IKZF2 2 datasets
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
Motif DE_72h DE_72h-IKZF2_MA2326.1 6 bp overlap
IRF3 1 dataset
Motif DE_72h DE_72h-IRF3_MA1418.2 17 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 370 bp overlap
KLF1 1 dataset
Motif DE_72h DE_72h-KLF1_MA0493.3 8 bp overlap
KLF2 1 dataset
Motif DE_72h DE_72h-KLF2_MA1515.2 8 bp overlap
KLF3 1 dataset
Motif DE_72h DE_72h-KLF3_MA1516.2 10 bp overlap
KLF4 1 dataset
Motif DE_72h DE_72h-KLF4_MA0039.5 8 bp overlap
KLF6 1 dataset
Motif DE_72h DE_72h-KLF6_MA1517.2 9 bp overlap
MAX 3 datasets
Motif DE_72h DE_72h-MAX_MA0058.4 6 bp overlap
ChIP H1 ENCFF914VQY 283 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 214 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 206 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MLX 1 dataset
Motif DE_72h DE_72h-MLX_MA0663.1 10 bp overlap
MLXIPL 1 dataset
Motif DE_72h DE_72h-MLXIPL_MA0664.2 8 bp overlap
MNT 1 dataset
Motif DE_72h DE_72h-MNT_MA0825.2 6 bp overlap
Mlxip 1 dataset
Motif DE_72h DE_72h-Mlxip_MA0622.2 6 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 184 bp overlap
NEUROG2 2 datasets
Motif DE_72h DE_72h-NEUROG2_MA1642.2 7 bp overlap
Motif DE_72h DE_72h-NEUROG2_MA1642.2 7 bp overlap
NOTCH3 1 dataset
ChIP TALL-1_GSI GSE104261.NOTCH3.TALL-1_GSI 216 bp overlap
NR1I3 1 dataset
Motif DE_72h DE_72h-NR1I3_MA1534.2 8 bp overlap
NR2F1 1 dataset
Motif DE_72h DE_72h-NR2F1_MA1537.2 13 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap
Nr2F6 1 dataset
Motif DE_72h DE_72h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_72h DE_72h-Nr2f6_MA0677.2 13 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 189 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 119 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 142 bp overlap
PPARD 1 dataset
Motif DE_72h DE_72h-PPARD_MA1550.2 14 bp overlap
PRDM1 2 datasets
Motif DE_72h DE_72h-PRDM1_MA0508.4 7 bp overlap
Motif DE_72h DE_72h-PRDM1_MA0508.4 7 bp overlap
Prdm5 1 dataset
Motif DE_72h DE_72h-Prdm5_MA1999.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1618.2 9 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 561 bp overlap
RXRB 1 dataset
Motif DE_72h DE_72h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_72h DE_72h-RXRG_MA0856.1 14 bp overlap
Rarg 1 dataset
Motif DE_72h DE_72h-Rarg_MA0860.1 17 bp overlap
Runx1 1 dataset
Motif DE_72h DE_72h-Runx1_MA0002.3 9 bp overlap
Rxra 1 dataset
Motif DE_72h DE_72h-Rxra_MA0512.2 14 bp overlap
SIX2 2 datasets
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 175 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 885 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 200 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 200 bp overlap
SMAD5 1 dataset
Motif DE_72h DE_72h-SMAD5_MA1557.1 10 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 172 bp overlap
SOHLH2 1 dataset
Motif DE_72h DE_72h-SOHLH2_MA1560.2 8 bp overlap
SOX10 1 dataset
Motif DE_72h DE_72h-SOX10_MA0442.3 6 bp overlap
SOX13 1 dataset
Motif DE_72h DE_72h-SOX13_MA1120.2 7 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 249 bp overlap
SOX2 2 datasets
Motif DE_72h DE_72h-SOX2_MA0143.5 7 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 121 bp overlap
SOX4 1 dataset
Motif DE_72h DE_72h-SOX4_MA0867.3 8 bp overlap
SOX9 1 dataset
Motif DE_72h DE_72h-SOX9_MA0077.2 8 bp overlap
SPIC 1 dataset
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
SRY 1 dataset
Motif DE_72h DE_72h-SRY_MA0084.2 7 bp overlap
Sox1 1 dataset
Motif DE_72h DE_72h-Sox1_MA0870.1 15 bp overlap
Sox11 1 dataset
Motif DE_72h DE_72h-Sox11_MA0869.3 8 bp overlap
Sox17 1 dataset
Motif DE_72h DE_72h-Sox17_MA0078.3 10 bp overlap
Sox3 1 dataset
Motif DE_72h DE_72h-Sox3_MA0514.3 7 bp overlap
Sox5 1 dataset
Motif DE_72h DE_72h-Sox5_MA0087.3 8 bp overlap
Sox6 1 dataset
Motif DE_72h DE_72h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_72h DE_72h-Sox7_MA2095.1 10 bp overlap
Stat6 1 dataset
Motif DE_72h DE_72h-Stat6_MA0520.2 10 bp overlap
TBX18 1 dataset
Motif DE_72h DE_72h-TBX18_MA1565.2 9 bp overlap
TCF3 1 dataset
Motif DE_72h DE_72h-TCF3_MA0522.4 7 bp overlap
TCFL5 1 dataset
Motif DE_72h DE_72h-TCFL5_MA0632.3 8 bp overlap
TEAD1 3 datasets
Motif DE_72h DE_72h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 168 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 248 bp overlap
TEAD2 1 dataset
Motif DE_72h DE_72h-TEAD2_MA1121.2 7 bp overlap
TEAD3 1 dataset
Motif DE_72h DE_72h-TEAD3_MA0808.1 8 bp overlap
TEAD4 1 dataset
Motif DE_72h DE_72h-TEAD4_MA0809.3 8 bp overlap
TFAP4 1 dataset
Motif DE_72h DE_72h-TFAP4_MA1570.1 10 bp overlap
TP63 5 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 437 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 391 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 236 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 277 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 218 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 217 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 231 bp overlap
USF2 3 datasets
ChIP GM12878 GSE97661.USF2.GM12878 164 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 134 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
ZBTB24 1 dataset
Motif DE_72h DE_72h-ZBTB24_MA2330.1 10 bp overlap
ZNF184 1 dataset
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF274 1 dataset
Motif DE_72h DE_72h-ZNF274_MA1592.2 12 bp overlap
ZNF382 1 dataset
Motif DE_72h DE_72h-ZNF382_MA1594.1 24 bp overlap
ZNF449 1 dataset
Motif DE_72h DE_72h-ZNF449_MA1656.2 10 bp overlap
ZNF528 1 dataset
Motif DE_72h DE_72h-ZNF528_MA1597.1 17 bp overlap
ZNF574 1 dataset
Motif DE_72h DE_72h-ZNF574_MA1982.2 14 bp overlap
ZNF652 1 dataset
Motif DE_72h DE_72h-ZNF652_MA1657.2 9 bp overlap
ZNF675 1 dataset
Motif DE_72h DE_72h-ZNF675_MA1714.2 19 bp overlap
ZNF680 1 dataset
Motif DE_72h DE_72h-ZNF680_MA1729.2 11 bp overlap
ZNF684 1 dataset
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZNF701 1 dataset
Motif DE_72h DE_72h-ZNF701_MA1987.2 17 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap