chr17 : 38,419,123 38,419,320
197 bp 77 TFs 1 linked gene
This 197 bp open chromatin element is linked to ARHGAP23 and is bound by 77 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ARHGAP23 9.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:38,414,123 – 38,424,320
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
77 transcription factors
Source
Cell type
AR 2 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 167 bp overlap
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 96 bp overlap
ARID1A 2 datasets
ChIP NGP GSE134626.ARID1A.NGP 68 bp overlap
ChIP NGP GSE134626.ARID1A.NGP 75 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 106 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 197 bp overlap
ARNTL 2 datasets
ChIP GSC_3565 GSE134972.ARNTL.GSC_3565 197 bp overlap
ChIP GSC_387 GSE134972.ARNTL.GSC_387 197 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 197 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 70 bp overlap
ATF7 2 datasets
ChIP HepG2 ENCFF589EBD 52 bp overlap
ChIP HepG2 ENCFF589EBD 197 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 112 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 197 bp overlap
BHLHE40 3 datasets
ChIP GM12878 ENCFF521IZR 84 bp overlap
ChIP GM12878 ENCSR987MTA.BHLHE40.GM12878 77 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 78 bp overlap
BRD4 2 datasets
ChIP HAP1 GSE108387.BRD4.HAP1 197 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 197 bp overlap
CTCF 2 datasets
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 172 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 197 bp overlap
E2F1 1 dataset
ChIP WTC11 ENCFF994SXO 147 bp overlap
ESR1 11 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 86 bp overlap
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 66 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 84 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 70 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 88 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 88 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 65 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 58 bp overlap
ChIP Ishikawa_M2-5 GSE147141.ESR1.Ishikawa_M2-5 55 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 56 bp overlap
ChIP breast_tumor_Male_16 GSE104399.ESR1.breast_tumor_Male_16 116 bp overlap
ETS1 3 datasets
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 65 bp overlap
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 95 bp overlap
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 68 bp overlap
ETV6 2 datasets
ChIP WTC11 ENCFF812SCD 183 bp overlap
ChIP WTC11 ENCFF812SCD 178 bp overlap
EZH2 20 datasets
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 57 bp overlap
ChIP GM23248 ENCFF404ZHM 160 bp overlap
ChIP GM23248 ENCFF506FWX 169 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 58 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 71 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 56 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 88 bp overlap
ChIP astrocyte ENCFF365JTP 129 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 114 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 139 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 71 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 74 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 72 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 107 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 89 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 197 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 58 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 87 bp overlap
ChIP neural progenitor cell ENCFF018MKA 197 bp overlap
ChIP neural progenitor cell ENCFF472NFV 197 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 146 bp overlap
GATA3 2 datasets
ChIP MCF-7_TamR GSE128445.GATA3.MCF-7_TamR 155 bp overlap
ChIP breast_tumor_Male_16 GSE104399.GATA3.breast_tumor_Male_16 76 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 114 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 85 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 72 bp overlap
HNRNPK 5 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 68 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 65 bp overlap
ChIP HepG2 ENCFF493GNS 197 bp overlap
ChIP HepG2 ENCFF826MXP 197 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 57 bp overlap
INO80 2 datasets
ChIP Hep-G2 GSE97411.INO80.Hep-G2 197 bp overlap
ChIP Hep-G2 GSE107730.INO80.Hep-G2 197 bp overlap
KDM4A 6 datasets
ChIP H1 ENCFF078LED 197 bp overlap
ChIP H1 ENCFF078LED 197 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 197 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 197 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 76 bp overlap
ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 68 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 197 bp overlap
KMT2A 1 dataset
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 56 bp overlap
L3MBTL2 1 dataset
ChIP HEK293T ENCFF482NJV 197 bp overlap
MAX 10 datasets
ChIP H1 ENCFF914VQY 79 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 72 bp overlap
ChIP HepG2 ENCFF507HCX 197 bp overlap
ChIP Ishikawa ENCFF064TDQ 197 bp overlap
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 83 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 71 bp overlap
ChIP K562 ENCFF110LJS 195 bp overlap
ChIP P493-6_24HR GSE125863.MAX.P493-6_24HR 197 bp overlap
ChIP WTC11 ENCFF223QFY 197 bp overlap
ChIP WTC11 ENCFF223QFY 197 bp overlap
MAZ 8 datasets
ChIP HEK293 ENCFF994GSG 129 bp overlap
ChIP HEK293 ENCFF994GSG 135 bp overlap
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 197 bp overlap
ChIP HepG2 ENCFF068NYH 197 bp overlap
ChIP HepG2 ENCFF068NYH 105 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 70 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 83 bp overlap
ChIP K-562 ENCSR000EFX.MAZ.K-562 55 bp overlap
MITF 1 dataset
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 82 bp overlap
MTA1 2 datasets
ChIP HepG2 ENCFF038CCB 156 bp overlap
ChIP HepG2 ENCFF038CCB 197 bp overlap
MTF2 2 datasets
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 56 bp overlap
ChIP HepG2 ENCFF916FZN 197 bp overlap
MXI1 6 datasets
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 78 bp overlap
ChIP SK-N-SH ENCFF746HVJ 197 bp overlap
ChIP SK-N-SH ENCFF746HVJ 197 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 61 bp overlap
ChIP neural ENCSR934NHU.MXI1.neural 197 bp overlap
ChIP neural cell ENCFF623HQN 97 bp overlap
MYC 3 datasets
ChIP GEN2-2 GSE70275.MYC.GEN2-2 156 bp overlap
ChIP Kelly GSE138295.MYC.Kelly 52 bp overlap
ChIP NB69 GSE138295.MYC.NB69 61 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 52 bp overlap
MYCN 8 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 72 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 197 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 161 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 197 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 77 bp overlap
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 102 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 66 bp overlap
ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 197 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 197 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 197 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 134 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 162 bp overlap
OGG1 1 dataset
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 67 bp overlap
PATZ1 2 datasets
ChIP HEK293 ENCFF016MNJ 146 bp overlap
ChIP HepG2 ENCFF723PFC 179 bp overlap
PHF8 1 dataset
ChIP WA01 ENCSR000ATK.PHF8.WA01 54 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 159 bp overlap
POLR2A 3 datasets
ChIP GM23338 ENCFF450WCS 70 bp overlap
ChIP GM23338 ENCFF450WCS 106 bp overlap
ChIP neural cell ENCFF604SPB 84 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 75 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 54 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 197 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 197 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 197 bp overlap
RYBP 1 dataset
ChIP WA01 GSE104690.RYBP.WA01 197 bp overlap
SIN3A 4 datasets
ChIP H1 ENCFF042ZSL 133 bp overlap
ChIP hiPSC_IA12 GSE106870.SIN3A.hiPSC_IA12 88 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 127 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 197 bp overlap
SMARCA4 6 datasets
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 54 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 197 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 85 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 197 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 82 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 50 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 59 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 197 bp overlap
SP1 2 datasets
ChIP WTC11 ENCFF688PEU 197 bp overlap
ChIP WTC11 ENCFF688PEU 197 bp overlap
SP3 2 datasets
ChIP HEK293 ENCFF087XLA 197 bp overlap
ChIP HEK293 ENCSR141PZA.SP3.HEK293 66 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 197 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 197 bp overlap
SS18 1 dataset
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 58 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 197 bp overlap
TARDBP 2 datasets
ChIP Hep-G2 ENCSR145CXH.TARDBP.Hep-G2 61 bp overlap
ChIP HepG2 ENCFF609NMG 152 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 197 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 197 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 197 bp overlap
TP53 1 dataset
ChIP WTC11 ENCFF359JCU 197 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 197 bp overlap
UBTF 1 dataset
ChIP HepG2 ENCFF424RNN 197 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 197 bp overlap
ZBTB26 4 datasets
ChIP HEK293 ENCFF752POA 186 bp overlap
ChIP HEK293 ENCFF752POA 112 bp overlap
ChIP HEK293 ENCFF752TCU 114 bp overlap
ChIP HEK293 ENCSR229DYF.ZBTB26.HEK293 69 bp overlap
ZBTB7A 6 datasets
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 60 bp overlap
ChIP HepG2 ENCFF492YYQ 68 bp overlap
ChIP Ishikawa ENCFF191NFH 169 bp overlap
ChIP Ishikawa ENCSR000BSZ.ZBTB7A.Ishikawa 80 bp overlap
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 69 bp overlap
ChIP VCaP_DHT GSE123089.ZBTB7A.VCaP_DHT 197 bp overlap
ZBTB8A 1 dataset
ChIP HEK293 ENCFF303WRD 53 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 83 bp overlap
ZFX 2 datasets
ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 178 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 197 bp overlap
ZNF138 1 dataset
ChIP WTC11 ENCFF800FUU 196 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap
ZNF687 2 datasets
ChIP HepG2 ENCFF653WIX 197 bp overlap
ChIP HepG2 ENCFF653WIX 197 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 197 bp overlap
ZNF782 2 datasets
ChIP HepG2 ENCFF449SAF 77 bp overlap
ChIP HepG2 ENCFF449SAF 197 bp overlap
ZSCAN4 2 datasets
ChIP HEK293 ENCFF381BKT 56 bp overlap
ChIP HEK293 ENCSR211GNP.ZSCAN4.HEK293 63 bp overlap