chr16 : 90,048,029 90,048,534
505 bp 98 TFs 1 linked gene
This 505 bp open chromatin element is linked to URAHP and is bound by 98 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
URAHP 432 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr16:90,043,029 – 90,053,534
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
98 transcription factors
Source
Cell type
ADNP 2 datasets
ChIP K-562 ENCSR440VKE.ADNP.K-562 449 bp overlap
ChIP K562 ENCFF492SKF 505 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 259 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 474 bp overlap
ChIP K562 ENCFF343XWA 354 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD3.K-562_iBET-BD1-IFNG 221 bp overlap
BRD4 6 datasets
ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 390 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 202 bp overlap
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 225 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 182 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 230 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 390 bp overlap
CBX1 3 datasets
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 221 bp overlap
ChIP K-562 ENCSR948QLZ.CBX1.K-562 276 bp overlap
ChIP K562 ENCFF008KGK 426 bp overlap
CBX3 1 dataset
ChIP K562 ENCFF410AQU 423 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 207 bp overlap
CEBPA 2 datasets
ChIP T-47D_progesterone GSE132649.CEBPA.T-47D_progesterone 248 bp overlap
ChIP T-47D_siCEBPA GSE132649.CEBPA.T-47D_siCEBPA 225 bp overlap
CEBPB 2 datasets
ChIP A549 ENCFF235AIY 211 bp overlap
ChIP K562 ENCFF584CTB 350 bp overlap
CHD2 1 dataset
ChIP WA01 ENCSR000EBT.CHD2.WA01 174 bp overlap
CHD4 3 datasets
ChIP A-549 ENCSR550SCU.CHD4.A-549 344 bp overlap
ChIP K562 ENCFF933NKI 505 bp overlap
ChIP RH4 GSE140115.CHD4.RH4 265 bp overlap
CTCF 1 dataset
ChIP uterus ENCSR392SFJ.CTCF.uterus 214 bp overlap
Cebpa 9 datasets
ChIP BLaER1 ENCFF093OYK 235 bp overlap
ChIP BLaER1 ENCFF262VBH 251 bp overlap
ChIP BLaER1 ENCFF274GAT 290 bp overlap
ChIP BLaER1 ENCFF335XTP 165 bp overlap
ChIP BLaER1 ENCFF364PUR 281 bp overlap
ChIP BLaER1 ENCFF460KDD 152 bp overlap
ChIP BLaER1 ENCFF858JKM 338 bp overlap
ChIP BLaER1 ENCFF858JKM 139 bp overlap
ChIP BLaER1 ENCFF896HSY 251 bp overlap
EGR1 3 datasets
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 182 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 159 bp overlap
ChIP K562 ENCFF113OPQ 451 bp overlap
ELF4 1 dataset
ChIP HepG2 ENCFF752OAT 53 bp overlap
ESR1 9 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 304 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 221 bp overlap
ChIP MCF-7_estradiol_4h GSE99626.ESR1.MCF-7_estradiol_4h 288 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 231 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 268 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 361 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 388 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 219 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 184 bp overlap
ESRRA 5 datasets
ChIP K-562 ENCSR486IFJ.ESRRA.K-562 413 bp overlap
ChIP K562 ENCFF968PEP 338 bp overlap
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 213 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 257 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 360 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 244 bp overlap
EZH2 2 datasets
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 130 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 330 bp overlap
FOS 1 dataset
ChIP K-562 ENCSR000DKB.FOS.K-562 135 bp overlap
FOXA1 1 dataset
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 52 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 202 bp overlap
GATA3 1 dataset
ChIP MCF-7 GSE128445.GATA3.MCF-7 212 bp overlap
GTF2I 2 datasets
ChIP K562 ENCFF539BYI 197 bp overlap
ChIP WTC11 ENCFF255XXZ 345 bp overlap
HDAC2 10 datasets
ChIP A-549 ENCSR659LJJ.HDAC2.A-549 292 bp overlap
ChIP H1 ENCFF353UJQ 345 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 353 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 322 bp overlap
ChIP K-562 ENCSR000AQG.HDAC2.K-562 215 bp overlap
ChIP K562 ENCFF744ALD 421 bp overlap
ChIP K562 ENCFF889DON 311 bp overlap
ChIP K562 ENCFF919OMP 470 bp overlap
ChIP MCF-7 ENCSR000BTP.HDAC2.MCF-7 127 bp overlap
ChIP WA01 ENCSR000AVB.HDAC2.WA01 272 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 422 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 223 bp overlap
ChIP HepG2 ENCFF854JLR 224 bp overlap
HNRNPK 4 datasets
ChIP Hep-G2 GSE120104.HNRNPK.Hep-G2 270 bp overlap
ChIP Hep-G2 ENCSR519QAA.HNRNPK.Hep-G2 260 bp overlap
ChIP K-562 ENCSR014RCS.HNRNPK.K-562 174 bp overlap
ChIP K-562 GSE120104.HNRNPK.K-562 172 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 235 bp overlap
JUN 1 dataset
ChIP MCF-7_BD610326 GSE128445.JUN.MCF-7_BD610326 267 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 111 bp overlap
KDM1A 20 datasets
ChIP A-549 ENCSR639GWS.KDM1A.A-549 326 bp overlap
ChIP A549 ENCFF633QSB 437 bp overlap
ChIP H1 ENCFF696SGD 376 bp overlap
ChIP HepG2 ENCFF240UWG 444 bp overlap
ChIP HepG2 ENCFF730KKG 325 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 382 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 325 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 349 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 261 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 428 bp overlap
ChIP K562 ENCFF128TYE 248 bp overlap
ChIP K562 ENCFF133OLU 454 bp overlap
ChIP K562 ENCFF934ZRG 237 bp overlap
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 179 bp overlap
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 227 bp overlap
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 319 bp overlap
ChIP keratinocyte_diff GSE57702.KDM1A.keratinocyte_diff 198 bp overlap
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 406 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 255 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 318 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 133 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 236 bp overlap
KLF13 1 dataset
ChIP K-562 ENCSR608HVP.KLF13.K-562 282 bp overlap
KLF3 1 dataset
ChIP keratinocyte GSE140991.KLF3.keratinocyte 192 bp overlap
KLF9 1 dataset
ChIP MCF-7 ENCFF618FCM 257 bp overlap
MAX 1 dataset
ChIP K562 ENCFF524IJO 368 bp overlap
MBD3 1 dataset
ChIP HEK293T GSE102945.MBD3.HEK293T 266 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 312 bp overlap
NCAPH2 2 datasets
ChIP HEK293 GSE97540.NCAPH2.HEK293 104 bp overlap
ChIP IMR-90_Bethyl275_OIS GSE118494.NCAPH2.IMR-90_Bethyl275_OIS 236 bp overlap
NKX2-1 1 dataset
ChIP NCI-H2087 GSE39998.NKX2-1.NCI-H2087 385 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 167 bp overlap
PCBP1 4 datasets
ChIP Hep-G2 GSE120104.PCBP1.Hep-G2 305 bp overlap
ChIP Hep-G2 ENCSR872EVQ.PCBP1.Hep-G2 294 bp overlap
ChIP K-562 GSE120104.PCBP1.K-562 281 bp overlap
ChIP K-562 ENCSR052PTN.PCBP1.K-562 272 bp overlap
PGR 3 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 269 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 210 bp overlap
ChIP T-47D_progesterone GSE132649.PGR.T-47D_progesterone 188 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 348 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 328 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 342 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 167 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 127 bp overlap
PTBP1 5 datasets
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 186 bp overlap
ChIP K-562 ENCSR948KMB.PTBP1.K-562 318 bp overlap
ChIP K-562 GSE120104.PTBP1.K-562 306 bp overlap
ChIP K562 ENCFF238NLS 407 bp overlap
ChIP K562 ENCFF773HPT 410 bp overlap
RB1 1 dataset
ChIP K-562 ENCSR506CVF.RB1.K-562 178 bp overlap
RBM25 2 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 452 bp overlap
ChIP K562 ENCFF957ORK 303 bp overlap
RBM39 2 datasets
ChIP K-562 ENCSR764OXF.RBM39.K-562 158 bp overlap
ChIP K-562 GSE120104.RBM39.K-562 164 bp overlap
RCOR1 5 datasets
ChIP Hep-G2 ENCSR000EDQ.RCOR1.Hep-G2 286 bp overlap
ChIP K-562 ENCSR000EGC.RCOR1.K-562 174 bp overlap
ChIP K562 ENCFF216EEJ 297 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 185 bp overlap
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 344 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 414 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 200 bp overlap
RUNX1 1 dataset
ChIP H9_DOX-5_HA GSE137670.RUNX1.H9_DOX-5_HA 131 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 135 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 135 bp overlap
SMARCA4 1 dataset
ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 195 bp overlap
SMARCA5 3 datasets
ChIP K-562 ENCSR895HSJ.SMARCA5.K-562 421 bp overlap
ChIP K562 ENCFF936KHY 445 bp overlap
ChIP MCF-7 ENCSR487ASM.SMARCA5.MCF-7 204 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 317 bp overlap
SP1 5 datasets
ChIP HEK293T ERP007114.SP1.HEK293T 254 bp overlap
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 216 bp overlap
ChIP HepG2 ENCFF458MVB 345 bp overlap
ChIP K562 ENCFF088XXV 312 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 163 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 284 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 164 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 154 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 201 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 109 bp overlap
TFDP1 1 dataset
ChIP K-562 ENCSR224IKA.TFDP1.K-562 185 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 195 bp overlap
TP63 2 datasets
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 187 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM24 2 datasets
ChIP LNCaP-abl_ETOH GSE69331.TRIM24.LNCaP-abl_ETOH 124 bp overlap
ChIP LNCaP_ETOH GSE69331.TRIM24.LNCaP_ETOH 288 bp overlap
USF1 13 datasets
ChIP A-549 ENCSR000BJB.USF1.A-549 172 bp overlap
ChIP H1 ENCFF090WVU 74 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 141 bp overlap
ChIP HepG2 ENCFF201JKA 337 bp overlap
ChIP HepG2 ENCFF807KYJ 201 bp overlap
ChIP Ishikawa ENCFF728IEG 261 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 261 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 267 bp overlap
ChIP K562 ENCFF202SFC 404 bp overlap
ChIP K562 ENCFF633EZB 265 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 203 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 298 bp overlap
ChIP WTC11 ENCFF699QGS 390 bp overlap
USF2 9 datasets
ChIP H1 ENCFF434EDF 277 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 172 bp overlap
ChIP K-562 GSE111469.USF2.K-562 244 bp overlap
ChIP K-562 ENCSR359NFW.USF2.K-562 196 bp overlap
ChIP K-562 ENCSR578KEN.USF2.K-562 179 bp overlap
ChIP K562 ENCFF306QPU 110 bp overlap
ChIP K562 ENCFF397QGU 265 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 213 bp overlap
ChIP WTC11 ENCFF139JAW 416 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 273 bp overlap
ChIP K562 ENCFF053XDV 285 bp overlap
YY1 3 datasets
ChIP Huh-7 GSE97411.YY1.Huh-7 398 bp overlap
ChIP K-562 ENCSR000BMH.YY1.K-562 105 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 149 bp overlap
ZBTB26 1 dataset
ChIP HEK293 ENCFF752POA 56 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 342 bp overlap
ChIP K562 ENCFF427SDV 454 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 472 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 328 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 203 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 124 bp overlap
ZFP82 1 dataset
ChIP HepG2 ENCFF665HBX 505 bp overlap
ZMYM3 8 datasets
ChIP Hep-G2 ENCSR848YWD.ZMYM3.Hep-G2 294 bp overlap
ChIP Hep-G2_AC_JH39-2-2B9 GSE97661.ZMYM3.Hep-G2_AC_JH39-2-2B9 238 bp overlap
ChIP Hep-G2_Ab_JH39-2-2F10 GSE97661.ZMYM3.Hep-G2_Ab_JH39-2-2F10 287 bp overlap
ChIP HepG2 ENCFF408KTI 477 bp overlap
ChIP HepG2 ENCFF667RVD 361 bp overlap
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 447 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 343 bp overlap
ChIP K562 ENCFF361LXT 293 bp overlap
ZNF143 3 datasets
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 141 bp overlap
ChIP K-562 ENCSR000EGP.ZNF143.K-562 113 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 233 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 197 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 330 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 415 bp overlap
ChIP HepG2 ENCFF490FFQ 283 bp overlap
ZNF768 1 dataset
ChIP HepG2 ENCFF388QCK 413 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 180 bp overlap