chr13 : 109,154,549 – 109,154,729
180 bp 74 TFs 0 linked genes
This 180 bp open chromatin element has no linked target genes and is bound by 74 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:109,149,549 – 109,159,729
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
74 transcription factors
Source
Cell type
APC 1 dataset
ChIP HCT-116 GSE103894.APC.HCT-116 180 bp overlap
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 180 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 180 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 180 bp overlap
ATF3 1 dataset
ChIP K562 ENCFF604FPV 82 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 180 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 88 bp overlap
BRD2 8 datasets
ChIP MDA-MB-231_BAZ2AsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2AsiRNA 153 bp overlap
ChIP MDA-MB-231_BAZ2BsiRNA GSE116879.BRD2.MDA-MB-231_BAZ2BsiRNA 103 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD2.MDA-MB-231_MGSK2801 180 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD2.MDA-MB-231_MGSK2801_rDNA 180 bp overlap
ChIP MDA-MB-231_NTsiRNA GSE116879.BRD2.MDA-MB-231_NTsiRNA 180 bp overlap
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 113 bp overlap
ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 180 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 102 bp overlap
BRD3 1 dataset
ChIP A-549 GSE119863.BRD3.A-549 180 bp overlap
BRD4 10 datasets
ChIP HCC1806_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.HCC1806_100nMtrametinib300nMJQ1_24h 162 bp overlap
ChIP HCC1806_DMSO_24h GSE87418.BRD4.HCC1806_DMSO_24h 124 bp overlap
ChIP HCC1937 GSE124748.BRD4.HCC1937 180 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 51 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 180 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 180 bp overlap
ChIP SUM149PT_DMSO GSE131097.BRD4.SUM149PT_DMSO 124 bp overlap
ChIP SUM149_DMSO GSE63581.BRD4.SUM149_DMSO 125 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.BRD4.SUM159PT_300nMJQ1_24h 180 bp overlap
ChIP SUM229PE_pos_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_pos_30nMtrametinib_24h 76 bp overlap
BRD9 2 datasets
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD9.MDA-MB-231_JQ1_MGSK2801 180 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 180 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 99 bp overlap
CREBBP 1 dataset
ChIP keratinocyte GSE140991.CREBBP.keratinocyte 149 bp overlap
CTCF 8 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 177 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 136 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 146 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP chondrocyte ENCFF134ORZ 180 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 180 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 156 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 123 bp overlap
CTCFL 1 dataset
ChIP OVCAR-8 GSE70764.CTCFL.OVCAR-8 140 bp overlap
E2F6 1 dataset
ChIP A-549 ENCSR000BTC.E2F6.A-549 129 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 76 bp overlap
ELF3 1 dataset
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 180 bp overlap
ERG 1 dataset
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 72 bp overlap
ESR1 1 dataset
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 59 bp overlap
ESRRA 3 datasets
ChIP SK-BR-3 GSE81651.ESRRA.SK-BR-3 180 bp overlap
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 180 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 180 bp overlap
ETS1 2 datasets
ChIP HEY-A8 GSE101832.ETS1.HEY-A8 91 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 180 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 109 bp overlap
FOS 4 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 180 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 53 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 92 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 180 bp overlap
FOXA1 2 datasets
ChIP LNCaP_GSK-48H GSE114266.FOXA1.LNCaP_GSK-48H 180 bp overlap
ChIP LNCaP_S2101-4H GSE114266.FOXA1.LNCaP_S2101-4H 145 bp overlap
FOXL2 2 datasets
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 180 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 153 bp overlap
HOXB5 1 dataset
ChIP A-549 ENCSR748HJZ.HOXB5.A-549 180 bp overlap
IKZF1 2 datasets
ChIP BCR-ABL1 GSE58825.IKZF1.BCR-ABL1 124 bp overlap
ChIP BCR-ABL1_LAX2 GSE58825.IKZF1.BCR-ABL1_LAX2 180 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 155 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 180 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 114 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 71 bp overlap
JUNB 1 dataset
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 180 bp overlap
JUND 3 datasets
ChIP HCT116 ENCFF748ZQX 73 bp overlap
ChIP HCT116 ENCFF748ZQX 180 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 180 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 153 bp overlap
MAFK 1 dataset
ChIP HeLa-S3 ENCSR000ECK.MAFK.HeLa-S3 180 bp overlap
MAX 6 datasets
ChIP A-549 ENCSR000BTJ.MAX.A-549 167 bp overlap
ChIP A549 ENCFF310XGQ 74 bp overlap
ChIP A549 ENCFF310XGQ 180 bp overlap
ChIP HeLa-S3 ENCFF398RFF 180 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 180 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 129 bp overlap
MED1 5 datasets
ChIP HCT-116 GSE121798.MED1.HCT-116 140 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.MED1.SUM159PT_100nMtrametinib300nMJQ1_24h 180 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.MED1.SUM159PT_100nMtrametinib_24h 180 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 80 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 180 bp overlap
MED26 1 dataset
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 180 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 180 bp overlap
MYCN 5 datasets
ChIP SH-EP_pRRL-MYCN GSE111905.MYCN.SH-EP_pRRL-MYCN 108 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 143 bp overlap
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 101 bp overlap
ChIP SHEP-21N_24h GSE80151.MYCN.SHEP-21N_24h 137 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.MYCN.SHEP-21N_DOX_0H 101 bp overlap
NELFE 2 datasets
ChIP HeLa GSE125534.NELFE.HeLa 177 bp overlap
ChIP HeLa_DOX GSE125534.NELFE.HeLa_DOX 57 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B_arsenic GSE145834.NFE2L2.BEAS-2B_arsenic 180 bp overlap
NIPBL 2 datasets
ChIP HCT-116_RAD21-mAC GSE104888.NIPBL.HCT-116_RAD21-mAC 180 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 93 bp overlap
NR3C1 6 datasets
ChIP ALL_DEX GSE109946.NR3C1.ALL_DEX 130 bp overlap
ChIP BEAS-2B_TNF-DEX_IA1 GSE125623.NR3C1.BEAS-2B_TNF-DEX_IA1 158 bp overlap
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 180 bp overlap
ChIP NALM-6 GSE67046.NR3C1.NALM-6 109 bp overlap
ChIP NALM-6_CASP1 GSE67046.NR3C1.NALM-6_CASP1 52 bp overlap
ChIP SUP-B15_DEX GSE107584.NR3C1.SUP-B15_DEX 180 bp overlap
NR5A2 1 dataset
ChIP A-549 ENCSR190GIW.NR5A2.A-549 180 bp overlap
PAX5 1 dataset
ChIP NALM-6 GSE126300.PAX5.NALM-6 159 bp overlap
PGR 2 datasets
ChIP AB32 GSE31129.PGR.AB32 180 bp overlap
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 180 bp overlap
PRDM1 2 datasets
ChIP A-549 ENCSR977FEF.PRDM1.A-549 130 bp overlap
ChIP HeLa-S3 ENCFF893HDJ 180 bp overlap
RAD21 3 datasets
ChIP HCT-116 GSE131606.RAD21.HCT-116 91 bp overlap
ChIP HeLa-S3 ENCFF775CHI 175 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 163 bp overlap
RBPJ 1 dataset
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 70 bp overlap
RELA 5 datasets
ChIP Detroit-562_LPS GSE91018.RELA.Detroit-562_LPS 180 bp overlap
ChIP Detroit-562_Pam2CSK4 GSE91018.RELA.Detroit-562_Pam2CSK4 94 bp overlap
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 180 bp overlap
ChIP Detroit-562_tri-DAP GSE91018.RELA.Detroit-562_tri-DAP 102 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 180 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 154 bp overlap
RUVBL2 1 dataset
ChIP U2OS GSE130602.RUVBL2.U2OS 166 bp overlap
RXRA 1 dataset
ChIP JMSU-1 GSE107734.RXRA.JMSU-1 128 bp overlap
SMAD3 3 datasets
ChIP HCC1954 GSE104760.SMAD3.HCC1954 122 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 104 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 180 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 98 bp overlap
SMC3 1 dataset
ChIP HeLa-S3 ENCFF992MML 180 bp overlap
SNAI2 1 dataset
ChIP PC-9_2DF GSE131687.SNAI2.PC-9_2DF 160 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 141 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 141 bp overlap
STAT3 4 datasets
ChIP HCC70 GSE152203.STAT3.HCC70 63 bp overlap
ChIP MCF-10A ENCSR000DOZ.STAT3.MCF-10A 140 bp overlap
ChIP MDA-MB-231_EtOH GSE85579.STAT3.MDA-MB-231_EtOH 71 bp overlap
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 180 bp overlap
SUPT5H 1 dataset
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 140 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 91 bp overlap
TCF3 2 datasets
ChIP 697_HF GSE138031.TCF3.697_HF 84 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 137 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 131 bp overlap
TFAP2C 1 dataset
ChIP HCC1954 GSE126897.TFAP2C.HCC1954 135 bp overlap
TWIST1 4 datasets
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 180 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 79 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 106 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 180 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 82 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR855WKQ.ZHX1.HeLa-S3 154 bp overlap
ZNF22 1 dataset
ChIP HEK293 GSE76494.ZNF22.HEK293 102 bp overlap