chr1 : 221,802,238 221,802,608
370 bp 92 TFs 0 linked genes
This 370 bp open chromatin element has no linked target genes and is bound by 92 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:221,797,238 – 221,807,608
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
92 transcription factors
Source
Cell type
AR 2 datasets
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 204 bp overlap
ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 241 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 178 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 262 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 129 bp overlap
ChIP K-562 ENCSR028UIU.ATF3.K-562 244 bp overlap
BACH2 1 dataset
ChIP B-cell_IL2 GSE102460.BACH2.B-cell_IL2 96 bp overlap
BARX2 2 datasets
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
Motif DE_72h DE_72h-BARX2_MA1471.2 9 bp overlap
BRD2 3 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 224 bp overlap
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 370 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 275 bp overlap
BRD4 6 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 98 bp overlap
ChIP HCC1806_100nMtrametinib_24h GSE87418.BRD4.HCC1806_100nMtrametinib_24h 129 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 337 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 298 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 239 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 230 bp overlap
BRD9 1 dataset
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD9.MDA-MB-231_MGSK2801 243 bp overlap
CHD4 1 dataset
ChIP HaCaT GSE139685.CHD4.HaCaT 215 bp overlap
CREBBP 1 dataset
ChIP keratinocyte_KLF3i GSE140991.CREBBP.keratinocyte_KLF3i 251 bp overlap
DPF2 1 dataset
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 123 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 148 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 324 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 141 bp overlap
FOS 11 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 370 bp overlap
ChIP HeLa-S3 ENCSR000EZE.FOS.HeLa-S3 133 bp overlap
ChIP IMR-90 ENCFF179EDA 260 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 231 bp overlap
ChIP K-562 ENCSR000DKB.FOS.K-562 171 bp overlap
ChIP MCF-10A ENCSR000DON.FOS.MCF-10A 220 bp overlap
ChIP MCF-7 ENCFF282FWZ 317 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 237 bp overlap
ChIP THP-1_eGFP-Pam3csk-4h GSE103477.FOS.THP-1_eGFP-Pam3csk-4h 191 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 306 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 370 bp overlap
FOSL1 6 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 206 bp overlap
ChIP HCT116 ENCFF540ZXN 294 bp overlap
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 328 bp overlap
ChIP K562 ENCFF455MKD 370 bp overlap
ChIP MDA-MB-231 GSE95303.FOSL1.MDA-MB-231 165 bp overlap
ChIP MG-63-3 GSE74230.FOSL1.MG-63-3 262 bp overlap
FOSL2 7 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 253 bp overlap
ChIP A549 ENCFF651PDH 262 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 247 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 157 bp overlap
ChIP SK-N-SH ENCFF127ZDW 91 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 204 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 221 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 292 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 123 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 157 bp overlap
FOXA2 5 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 303 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 105 bp overlap
ChIP DE DE-FOXA2-1 370 bp overlap
ChIP DE DE-FOXA2-2 370 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 204 bp overlap
FOXL2 1 dataset
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 307 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 276 bp overlap
GATA4 8 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 182 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 268 bp overlap
ChIP DE DE-GATA4-1 370 bp overlap
ChIP DE DE-GATA4-2 370 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 370 bp overlap
ChIP foregut GSE117136.GATA4.foregut 370 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 303 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 293 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 370 bp overlap
ChIP DE DE-GATA6-2 370 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 256 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 370 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 297 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 370 bp overlap
ChIP foregut GSE117136.GATA6.foregut 370 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 368 bp overlap
HMGB2 1 dataset
ChIP IMR-90_senescent GSE98245.HMGB2.IMR-90_senescent 102 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 150 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 173 bp overlap
Hand1 2 datasets
Motif DE_60h DE_60h-Hand1_MA2123.1 9 bp overlap
Motif DE_72h DE_72h-Hand1_MA2123.1 9 bp overlap
JUN 13 datasets
ChIP 786-O GSE86092.JUN.786-O 156 bp overlap
ChIP DE_D1 S08-DE-d1-JUN-exp1 263 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 214 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 370 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 120 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 266 bp overlap
ChIP HeLa-S3 ENCFF668QVP 312 bp overlap
ChIP HeLa-S3 ENCSR000EDG.JUN.HeLa-S3 271 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUN.MCF10A-Er-Src_EtOH 268 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 135 bp overlap
ChIP keratinocyte_CHD4-KD GSE139685.JUN.keratinocyte_CHD4-KD 175 bp overlap
ChIP primary-lung-fibroblast GSE114844.JUN.primary-lung-fibroblast 176 bp overlap
JUNB 4 datasets
ChIP CFPAC-1 GSE119930.JUNB.CFPAC-1 370 bp overlap
ChIP HAEC GSE89970.JUNB.HAEC 140 bp overlap
ChIP K-562 ENCSR000DJY.JUNB.K-562 158 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 190 bp overlap
JUND 11 datasets
ChIP A-549 ENCSR000BRF.JUND.A-549 170 bp overlap
ChIP HCT-116 ENCSR000BSA.JUND.HCT-116 178 bp overlap
ChIP HeLa-S3 ENCFF642OHL 267 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 238 bp overlap
ChIP K-562 ENCSR000EGN.JUND.K-562 115 bp overlap
ChIP PC-3 GSE29808.JUND.PC-3 220 bp overlap
ChIP SK-N-SH ENCFF551NEQ 275 bp overlap
ChIP SK-N-SH ENCFF971JKN 235 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 211 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 206 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 156 bp overlap
KDM1A 1 dataset
ChIP keratinocyte_DMSO GSE133560.KDM1A.keratinocyte_DMSO 83 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 192 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 70 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 59 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 319 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 107 bp overlap
MYCN 1 dataset
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 124 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 301 bp overlap
NEUROG2 1 dataset
ChIP MRC-5_NFD_05DPT GSE75910.NEUROG2.MRC-5_NFD_05DPT 201 bp overlap
NKX2-1 1 dataset
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 168 bp overlap
NR3C1 1 dataset
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 282 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 99 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 254 bp overlap
PDX1 2 datasets
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 86 bp overlap
ChIP islet ERP001456.PDX1.islet 115 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 136 bp overlap
RAD21 1 dataset
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 143 bp overlap
RBPJ 2 datasets
ChIP SCC_0h GSE156486.RBPJ.SCC_0h 248 bp overlap
ChIP SCC_4h GSE156486.RBPJ.SCC_4h 159 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 127 bp overlap
RELA 4 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 263 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 262 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 213 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 154 bp overlap
RFX5 1 dataset
ChIP HeLa-S3 ENCFF703XPB 219 bp overlap
RUNX1 1 dataset
ChIP THP-1 GSE79899.RUNX1.THP-1 170 bp overlap
SMAD2 3 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
Motif DE_72h DE_72h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 144 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 370 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 322 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 358 bp overlap
SMAD3 6 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 370 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 203 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 146 bp overlap
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 179 bp overlap
ChIP NCI-H441_SIITTF1 GSE51509.SMAD3.NCI-H441_SIITTF1 262 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 197 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 208 bp overlap
SMARCA4 12 datasets
ChIP A-549_AG15677 GSE132290.SMARCA4.A-549_AG15677 186 bp overlap
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 192 bp overlap
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 178 bp overlap
ChIP A-549_AG15720 GSE132290.SMARCA4.A-549_AG15720 160 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 91 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 175 bp overlap
ChIP A-549_AG15723 GSE132290.SMARCA4.A-549_AG15723 86 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 150 bp overlap
ChIP A-549_AG15725 GSE132290.SMARCA4.A-549_AG15725 198 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 280 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 319 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 310 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 265 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 370 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 360 bp overlap
SMC1 1 dataset
ChIP HMEC-1 GSE101921.SMC1.HMEC-1 139 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 137 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d3 370 bp overlap
SMC3 2 datasets
ChIP HeLa-S3 ENCFF992MML 206 bp overlap
ChIP HeLa-S3 ENCSR000ECS.SMC3.HeLa-S3 107 bp overlap
SNAI2 1 dataset
ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 135 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 234 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 344 bp overlap
SOX2 2 datasets
ChIP HCC2814 GSE137459.SOX2.HCC2814 252 bp overlap
ChIP HCC95 GSE137459.SOX2.HCC95 297 bp overlap
SOX4 1 dataset
ChIP MDA-MB-231_TGFb GSE104760.SOX4.MDA-MB-231_TGFb 185 bp overlap
SP7 2 datasets
ChIP HEK293 ENCFF733RBE 228 bp overlap
ChIP HEK293 ENCSR468IJT.SP7.HEK293 370 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 194 bp overlap
ChIP GM12891 ENCFF563IUT 227 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 162 bp overlap
SPIC 1 dataset
Motif DE_72h DE_72h-SPIC_MA0687.2 13 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 178 bp overlap
STAG2 1 dataset
ChIP HMEC-1 GSE101921.STAG2.HMEC-1 178 bp overlap
STAT3 6 datasets
ChIP HCC1143_EtOH GSE85579.STAT3.HCC1143_EtOH 102 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 139 bp overlap
ChIP MCF10A-Er-Src_EtOH GSE115597.STAT3.MCF10A-Er-Src_EtOH 150 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 154 bp overlap
ChIP MDA-MB-157_EtOH GSE85579.STAT3.MDA-MB-157_EtOH 258 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 165 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 290 bp overlap
TEAD4 1 dataset
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 253 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 177 bp overlap
TP63 6 datasets
ChIP JHU-029 GSE88859.TP63.JHU-029 188 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 219 bp overlap
ChIP keratinocyte GSE56674.TP63.keratinocyte 122 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 188 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 201 bp overlap
ChIP keratinocyte_D4 GSE59824.TP63.keratinocyte_D4 84 bp overlap
ZNF148 1 dataset
Motif DE_72h DE_72h-ZNF148_MA1653.2 10 bp overlap
ZNF184 1 dataset
Motif DE_72h DE_72h-ZNF184_MA2120.1 13 bp overlap
ZNF281 1 dataset
Motif DE_72h DE_72h-ZNF281_MA1630.3 10 bp overlap
ZNF282 1 dataset
Motif DE_72h DE_72h-ZNF282_MA1154.2 15 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 157 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 114 bp overlap
ZNF418 2 datasets
Motif DE_72h DE_72h-ZNF418_MA1980.1 15 bp overlap
Motif DE_72h DE_72h-ZNF418_MA1980.1 15 bp overlap
ZNF528 1 dataset
ChIP HEK293 GSE76494.ZNF528.HEK293 316 bp overlap
ZNF530 1 dataset
Motif DE_72h DE_72h-ZNF530_MA1981.2 14 bp overlap
ZNF85 1 dataset
Motif DE_72h DE_72h-ZNF85_MA1720.2 12 bp overlap