chr13 : 78,909,026 78,910,015
989 bp 109 TFs 0 linked genes
This 989 bp open chromatin element has no linked target genes and is bound by 109 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:78,904,026 – 78,915,015
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
109 transcription factors
Source
Cell type
Ahr::Arnt 2 datasets
Motif DE_60h DE_60h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_72h DE_72h-AhrArnt_MA0006.2 5 bp overlap
Atoh1 1 dataset
Motif DE_60h DE_60h-Atoh1_MA1467.3 7 bp overlap
BARHL1 1 dataset
Motif DE_60h DE_60h-BARHL1_MA0877.4 6 bp overlap
BARHL2 1 dataset
Motif DE_60h DE_60h-BARHL2_MA0635.2 6 bp overlap
BRD4 1 dataset
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 414 bp overlap
CDX1 1 dataset
Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap
CDX2 1 dataset
Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap
CDX4 1 dataset
Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap
CREB1 1 dataset
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
Crx 1 dataset
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DUX4 1 dataset
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Dmbx1 1 dataset
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Dux 1 dataset
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
E2F7 2 datasets
Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap
Motif DE_72h DE_72h-E2F7_MA0758.1 14 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 132 bp overlap
EOMES 2 datasets
Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 337 bp overlap
ESRRA 2 datasets
Motif DE_60h DE_60h-ESRRA_MA0592.4 9 bp overlap
Motif DE_72h DE_72h-ESRRA_MA0592.4 9 bp overlap
ESRRB 2 datasets
Motif DE_60h DE_60h-ESRRB_MA0141.4 10 bp overlap
Motif DE_72h DE_72h-ESRRB_MA0141.4 10 bp overlap
FIGLA 1 dataset
Motif DE_60h DE_60h-FIGLA_MA0820.2 6 bp overlap
FOXA2 5 datasets
ChIP DE DE-FOXA2-1 874 bp overlap
ChIP DE DE-FOXA2-2 762 bp overlap
ChIP colorectal-cancer_type-C GSE106921.FOXA2.colorectal-cancer_type-C 390 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 265 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 242 bp overlap
FOXB1 3 datasets
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
Motif DE_60h DE_60h-FOXB1_MA0845.1 11 bp overlap
Motif DE_72h DE_72h-FOXB1_MA0845.1 11 bp overlap
FOXC1 3 datasets
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_60h DE_60h-FOXC1_MA0032.2 11 bp overlap
Motif DE_72h DE_72h-FOXC1_MA0032.2 11 bp overlap
FOXC2 3 datasets
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_60h DE_60h-FOXC2_MA0846.2 11 bp overlap
Motif DE_72h DE_72h-FOXC2_MA0846.2 11 bp overlap
FOXD2 2 datasets
Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap
Motif DE_72h DE_72h-FOXD2_MA0847.4 11 bp overlap
FOXD3 1 dataset
Motif DE_60h DE_60h-FOXD3_MA0041.3 14 bp overlap
FOXE1 3 datasets
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
Motif DE_72h DE_72h-FOXE1_MA1487.3 12 bp overlap
FOXO6 5 datasets
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
Motif DE_60h DE_60h-FOXO6_MA0849.1 7 bp overlap
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
Motif DE_72h DE_72h-FOXO6_MA0849.1 7 bp overlap
Foxj2 3 datasets
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Motif DE_60h DE_60h-Foxj2_MA0614.1 8 bp overlap
Motif DE_72h DE_72h-Foxj2_MA0614.1 8 bp overlap
Foxj3 2 datasets
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
Motif DE_72h DE_72h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif DE_60h DE_60h-Foxl2_MA1607.2 10 bp overlap
GATA1 1 dataset
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 110 bp overlap
GATA2 1 dataset
ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 182 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 926 bp overlap
ChIP DE DE-GATA4-2 869 bp overlap
ChIP foregut GSE117136.GATA4.foregut 606 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 379 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 228 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 768 bp overlap
ChIP DE DE-GATA6-2 710 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 436 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 553 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 330 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 808 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 379 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 351 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 446 bp overlap
ChIP foregut GSE117136.GATA6.foregut 472 bp overlap
GFI1 2 datasets
Motif DE_60h DE_60h-GFI1_MA0038.3 11 bp overlap
Motif DE_72h DE_72h-GFI1_MA0038.3 11 bp overlap
GLI3 2 datasets
Motif DE_60h DE_60h-GLI3_MA1491.3 15 bp overlap
Motif DE_72h DE_72h-GLI3_MA1491.3 15 bp overlap
GSC 1 dataset
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gfi1B 2 datasets
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_72h DE_72h-Gfi1B_MA0483.2 10 bp overlap
HAND2 1 dataset
Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap
HNF4A 2 datasets
Motif DE_60h DE_60h-HNF4A_MA0114.5 9 bp overlap
Motif DE_72h DE_72h-HNF4A_MA0114.5 9 bp overlap
HNF4G 2 datasets
Motif DE_60h DE_60h-HNF4G_MA0484.3 9 bp overlap
Motif DE_72h DE_72h-HNF4G_MA0484.3 9 bp overlap
HSF1 1 dataset
ChIP MO91_CHX_10UM GSE45852.HSF1.MO91_CHX_10UM 218 bp overlap
Hnf1A 1 dataset
Motif DE_60h DE_60h-Hnf1A_MA1991.2 10 bp overlap
Hoxa13 1 dataset
Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap
Hoxd13 1 dataset
Motif DE_60h DE_60h-Hoxd13_MA0909.4 7 bp overlap
Lef1 2 datasets
Motif DE_60h DE_60h-Lef1_MA0768.3 8 bp overlap
Motif DE_72h DE_72h-Lef1_MA0768.3 8 bp overlap
MEIS1 2 datasets
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_60h DE_60h-MEIS2_MA0774.1 8 bp overlap
MGA 1 dataset
Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 149 bp overlap
MYF6 2 datasets
Motif DE_60h DE_60h-MYF6_MA0667.1 10 bp overlap
Motif DE_72h DE_72h-MYF6_MA0667.1 10 bp overlap
Mecom 1 dataset
Motif DE_60h DE_60h-Mecom_MA0029.2 11 bp overlap
Msgn1 2 datasets
Motif DE_60h DE_60h-Msgn1_MA1524.3 10 bp overlap
Motif DE_72h DE_72h-Msgn1_MA1524.3 10 bp overlap
NFYA 1 dataset
Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap
NFYC 1 dataset
Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap
NR2F1 1 dataset
Motif DE_60h DE_60h-NR2F1_MA1538.1 15 bp overlap
NR5A1 2 datasets
Motif DE_60h DE_60h-NR5A1_MA1540.3 12 bp overlap
Motif DE_72h DE_72h-NR5A1_MA1540.3 12 bp overlap
NR6A1 2 datasets
Motif DE_60h DE_60h-NR6A1_MA1541.2 14 bp overlap
Motif DE_72h DE_72h-NR6A1_MA1541.2 14 bp overlap
Nr2e1 2 datasets
Motif DE_60h DE_60h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_72h DE_72h-Nr2e1_MA0676.1 9 bp overlap
Nr5A2 2 datasets
Motif DE_60h DE_60h-Nr5A2_MA0505.3 9 bp overlap
Motif DE_72h DE_72h-Nr5A2_MA0505.3 9 bp overlap
OTX1 1 dataset
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
PBX3 1 dataset
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PITX1 1 dataset
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_60h DE_60h-PITX2_MA1547.2 8 bp overlap
PITX3 1 dataset
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
PKNOX1 1 dataset
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
Prdm15 1 dataset
Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1620.2 8 bp overlap
RHOXF1 1 dataset
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SIN3A 1 dataset
ChIP HUVEC-C GSE103245.SIN3A.HUVEC-C 225 bp overlap
SMAD2 2 datasets
Motif DE_60h DE_60h-SMAD2_MA1964.2 6 bp overlap
ChIP endoderm GSE29422.SMAD2.endoderm 308 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 694 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 546 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 604 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 300 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 364 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 392 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 709 bp overlap
SOX18 2 datasets
Motif DE_60h DE_60h-SOX18_MA1563.2 8 bp overlap
Motif DE_72h DE_72h-SOX18_MA1563.2 8 bp overlap
SOX9 2 datasets
Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap
Motif DE_72h DE_72h-SOX9_MA0077.2 8 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
SRY 2 datasets
Motif DE_60h DE_60h-SRY_MA0084.2 7 bp overlap
Motif DE_72h DE_72h-SRY_MA0084.2 7 bp overlap
Sox6 1 dataset
Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap
Sox7 1 dataset
Motif DE_60h DE_60h-Sox7_MA2095.1 10 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 244 bp overlap
TBX1 1 dataset
Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap
TBX20 1 dataset
Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_60h DE_60h-TBX21_MA0690.3 10 bp overlap
TBX5 1 dataset
Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap
TCF7 2 datasets
Motif DE_60h DE_60h-TCF7_MA0769.3 7 bp overlap
Motif DE_72h DE_72h-TCF7_MA0769.3 7 bp overlap
TCF7L1 3 datasets
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_60h DE_60h-TCF7L1_MA1421.1 12 bp overlap
Motif DE_72h DE_72h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_60h DE_60h-TCF7L2_MA0523.2 9 bp overlap
ZBTB18 1 dataset
Motif DE_60h DE_60h-ZBTB18_MA0698.2 11 bp overlap
ZEB1 1 dataset
Motif DE_60h DE_60h-ZEB1_MA0103.4 6 bp overlap
ZNF16 2 datasets
Motif DE_60h DE_60h-ZNF16_MA1654.2 21 bp overlap
Motif DE_72h DE_72h-ZNF16_MA1654.2 21 bp overlap
ZNF24 1 dataset
Motif DE_60h DE_60h-ZNF24_MA1124.1 13 bp overlap
ZNF263 2 datasets
Motif DE_60h DE_60h-ZNF263_MA0528.3 7 bp overlap
Motif DE_72h DE_72h-ZNF263_MA0528.3 7 bp overlap
ZNF354A 2 datasets
Motif DE_60h DE_60h-ZNF354A_MA1978.2 20 bp overlap
Motif DE_72h DE_72h-ZNF354A_MA1978.2 20 bp overlap
ZNF418 1 dataset
Motif DE_60h DE_60h-ZNF418_MA1980.1 15 bp overlap
ZNF558 1 dataset
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF667 2 datasets
Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF677 1 dataset
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF768 2 datasets
Motif DE_60h DE_60h-ZNF768_MA1731.2 9 bp overlap
Motif DE_72h DE_72h-ZNF768_MA1731.2 9 bp overlap
Zfp335 1 dataset
Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap