chr12 : 54,888,220 – 54,888,685

465 bp 97 TFs 0 linked genes

This 465 bp open chromatin element has no linked target genes and is bound by 97 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

97 transcription factors

ASH2L 1 dataset

ChIP H1 ENCFF399KAM 378 bp overlap

Ascl2 1 dataset

Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap

BHLHE22 1 dataset

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

CTBP1 1 dataset

ChIP K562 ENCFF403WPG 451 bp overlap

E2F8 1 dataset

Motif DE_12h DE_12h-E2F8_MA0865.3 9 bp overlap

EGR1 3 datasets

ChIP K562 ENCFF006PJY 127 bp overlap

ChIP K562 ENCFF895KGN 199 bp overlap

ChIP MCF-7 ENCFF679ZBN 220 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 201 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FOXA1 2 datasets

Motif DE_12h DE_12h-FOXA1_MA0148.5 8 bp overlap

ChIP MCF-7 ENCFF465LTH 334 bp overlap

FOXA2 3 datasets

ChIP DE DE-FOXA2-1 397 bp overlap

ChIP DE DE-FOXA2-2 381 bp overlap

Motif DE_12h DE_12h-FOXA2_MA0047.4 8 bp overlap

FOXA3 2 datasets

Motif DE_12h DE_12h-FOXA3_MA1683.2 7 bp overlap

ChIP K562 ENCFF781VSC 282 bp overlap

FOXB1 1 dataset

Motif DE_12h DE_12h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_12h DE_12h-FOXC1_MA0032.2 11 bp overlap

FOXC2 1 dataset

Motif DE_12h DE_12h-FOXC2_MA0846.2 11 bp overlap

FOXD1 1 dataset

Motif DE_12h DE_12h-FOXD1_MA0031.2 7 bp overlap

FOXD2 1 dataset

Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap

FOXD3 1 dataset

Motif DE_12h DE_12h-FOXD3_MA0041.3 14 bp overlap

FOXE1 1 dataset

Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap

FOXF2 1 dataset

Motif DE_12h DE_12h-FOXF2_MA0030.2 9 bp overlap

FOXG1 1 dataset

Motif DE_12h DE_12h-FOXG1_MA0613.1 8 bp overlap

FOXI1 1 dataset

Motif DE_12h DE_12h-FOXI1_MA0042.2 7 bp overlap

FOXK1 2 datasets

Motif DE_12h DE_12h-FOXK1_MA0852.3 7 bp overlap

ChIP WTC11 ENCFF875IGU 317 bp overlap

FOXK2 1 dataset

Motif DE_12h DE_12h-FOXK2_MA1103.3 7 bp overlap

FOXL1 1 dataset

Motif DE_12h DE_12h-FOXL1_MA0033.2 7 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXO4 1 dataset

Motif DE_12h DE_12h-FOXO4_MA0848.1 7 bp overlap

FOXO6 1 dataset

Motif DE_12h DE_12h-FOXO6_MA0849.1 7 bp overlap

FOXP1 1 dataset

Motif DE_12h DE_12h-FOXP1_MA0481.4 7 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

FOXP3 1 dataset

Motif DE_12h DE_12h-FOXP3_MA0850.1 7 bp overlap

FOXP4 2 datasets

Motif DE_12h DE_12h-FOXP4_MA2117.1 7 bp overlap

ChIP WTC11 ENCFF708TAF 323 bp overlap

FOXS1 1 dataset

Motif DE_12h DE_12h-FOXS1_MA2118.1 8 bp overlap

Foxf1 1 dataset

Motif DE_12h DE_12h-Foxf1_MA1606.2 7 bp overlap

Foxj2 1 dataset

Motif DE_12h DE_12h-Foxj2_MA0614.1 8 bp overlap

Foxj3 1 dataset

Motif DE_12h DE_12h-Foxj3_MA0851.2 9 bp overlap

Foxl2 1 dataset

Motif DE_12h DE_12h-Foxl2_MA1607.2 10 bp overlap

Foxo1 1 dataset

Motif DE_12h DE_12h-Foxo1_MA0480.3 7 bp overlap

Foxo3 1 dataset

Motif DE_12h DE_12h-Foxo3_MA0157.4 7 bp overlap

GATA3 2 datasets

ChIP MCF-7 ENCFF352QVM 282 bp overlap

ChIP MCF-7 ENCFF437NQS 236 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 379 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 305 bp overlap

Motif DE_12h DE_12h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 298 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 308 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 265 bp overlap

GLIS1 1 dataset

ChIP HEK293 ENCFF299RSE 145 bp overlap

Gata3 1 dataset

Motif DE_12h DE_12h-Gata3_MA0037.5 8 bp overlap

HDAC2 1 dataset

ChIP MCF-7 ENCFF881POI 294 bp overlap

ISL2 1 dataset

Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap

KLF10 1 dataset

Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap

KLF12 1 dataset

Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap

KLF14 1 dataset

Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap

KLF16 1 dataset

Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap

KLF4 2 datasets

Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap

ChIP MCF-7 ENCFF948KTQ 465 bp overlap

KLF5 2 datasets

Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap

MAX 2 datasets

ChIP WTC11 ENCFF223QFY 325 bp overlap

ChIP WTC11 ENCFF223QFY 122 bp overlap

MAZ 1 dataset

Motif DE_12h DE_12h-MAZ_MA1522.2 8 bp overlap

MYB 1 dataset

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

MYOG 1 dataset

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

NHLH1 1 dataset

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

NR2F1 2 datasets

ChIP K562 ENCFF221HJH 225 bp overlap

ChIP K562 ENCFF221HJH 355 bp overlap

NRF1 1 dataset

ChIP K562 ENCFF689EWI 275 bp overlap

Neurod2 1 dataset

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

PATZ1 1 dataset

Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 352 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 465 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 423 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 463 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 465 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 437 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 427 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 290 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SP1 1 dataset

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

SP2 1 dataset

Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap

SP3 1 dataset

Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap

SP4 1 dataset

Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

SP8 1 dataset

Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap

Sox11 1 dataset

Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap

TCF7L1 1 dataset

Motif DE_12h DE_12h-TCF7L1_MA1421.1 12 bp overlap

TCF7L2 1 dataset

ChIP HEK293 ENCFF513JQN 325 bp overlap

TFAP4 1 dataset

ChIP K562 ENCFF727PXG 327 bp overlap

TFAP4::FLI1 1 dataset

Motif DE_12h DE_12h-TFAP4FLI1_MA1967.2 14 bp overlap

THAP1 1 dataset

Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap

TRPS1 1 dataset

Motif DE_12h DE_12h-TRPS1_MA1970.2 8 bp overlap

Tcf12 1 dataset

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Wt1 1 dataset

Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap

YY1 1 dataset

ChIP H1 ENCFF524BTL 287 bp overlap

YY2 1 dataset

Motif DE_12h DE_12h-YY2_MA0748.3 7 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZNF148 2 datasets

Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap

ChIP K562 ENCFF352SDL 261 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF281 4 datasets

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

ChIP K562 ENCFF594VNM 251 bp overlap

ChIP WTC11 ENCFF551GAV 252 bp overlap

ZNF530 1 dataset

Motif DE_12h DE_12h-ZNF530_MA1981.2 14 bp overlap

ZNF574 1 dataset

Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap

ZNF582 1 dataset

Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF85 1 dataset

Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap