chr1 : 204,420,137 – 204,420,371
234 bp 83 TFs 2 linked genes
This 234 bp open chromatin element is linked to PPP1R15B and ENSG00000288934 and is bound by 83 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
PPP1R15B 8.2 kb Proximal Proximity
ENSG00000288934 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:204,415,137 – 204,425,371
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
ADNP 2 datasets
ChIP K562 ENCFF492SKF 234 bp overlap
ChIP K562 ENCFF492SKF 234 bp overlap
AFF1 3 datasets
ChIP K-562 ENCSR426URK.AFF1.K-562 233 bp overlap
ChIP K562 ENCFF583EEH 234 bp overlap
ChIP K562 ENCFF583EEH 111 bp overlap
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 234 bp overlap
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 234 bp overlap
ChIP K562 ENCFF938UXQ 234 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 89 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 234 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 234 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 172 bp overlap
BCOR 2 datasets
ChIP K-562 ENCSR808AKZ.BCOR.K-562 200 bp overlap
ChIP K562 ENCFF343XWA 234 bp overlap
BRD2 1 dataset
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 50 bp overlap
BRD4 8 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 140 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 152 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 221 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 234 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 210 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 234 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 234 bp overlap
ChIP SUM229PE_neg_30nMtrametinib_24h GSE87418.BRD4.SUM229PE_neg_30nMtrametinib_24h 87 bp overlap
CBFA2T2 1 dataset
ChIP K562 ENCFF963TXY 234 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 234 bp overlap
ChIP K562 ENCFF673OEZ 210 bp overlap
CC2D1A 1 dataset
ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 68 bp overlap
CHD1 1 dataset
ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 140 bp overlap
CTBP1 2 datasets
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 217 bp overlap
ChIP K562 ENCFF403WPG 234 bp overlap
DPF2 4 datasets
ChIP K-562 ENCSR219BXP.DPF2.K-562 234 bp overlap
ChIP K562 ENCFF739JDE 234 bp overlap
ChIP K562 ENCFF739JDE 171 bp overlap
ChIP K562 ENCFF775HUO 234 bp overlap
EHMT2 1 dataset
ChIP K-562 ENCSR175EOM.EHMT2.K-562 205 bp overlap
ELF3 1 dataset
ChIP PDAC GSE64557.ELF3.PDAC 234 bp overlap
EP300 1 dataset
ChIP K-562 ENCSR000EGE.EP300.K-562 166 bp overlap
FOXA1 6 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 203 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 190 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 234 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 234 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 174 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 234 bp overlap
FOXA2 3 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 164 bp overlap
ChIP DE DE-FOXA2-1 234 bp overlap
ChIP DE DE-FOXA2-2 234 bp overlap
FOXK2 2 datasets
ChIP K-562 ENCSR508DQA.FOXK2.K-562 229 bp overlap
ChIP K-562 ENCSR302AWT.FOXK2.K-562 220 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 127 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 217 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000EWG.GATA2.K-562 164 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 234 bp overlap
ChIP DE DE-GATA4-2 234 bp overlap
ChIP foregut GSE117136.GATA4.foregut 232 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 234 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 234 bp overlap
ChIP DE DE-GATA6-2 234 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 167 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 234 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 180 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 234 bp overlap
ChIP foregut GSE117136.GATA6.foregut 234 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 234 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 170 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 234 bp overlap
GFI1B 2 datasets
ChIP K-562 ENCSR509GDT.GFI1B.K-562 112 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 73 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 79 bp overlap
HDAC1 5 datasets
ChIP K-562 ENCSR711VWL.HDAC1.K-562 234 bp overlap
ChIP K-562 ENCSR387UWP.HDAC1.K-562 234 bp overlap
ChIP K-562 ENCSR000AQF.HDAC1.K-562 136 bp overlap
ChIP K562 ENCFF928TKZ 234 bp overlap
ChIP K562 ENCFF928TKZ 130 bp overlap
HDAC2 3 datasets
ChIP K-562 ENCSR075HTM.HDAC2.K-562 159 bp overlap
ChIP K-562 ENCSR893WSB.HDAC2.K-562 234 bp overlap
ChIP K562 ENCFF919OMP 234 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 234 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 234 bp overlap
ChIP K562 ENCFF348IBL 66 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 113 bp overlap
KDM1A 7 datasets
ChIP K-562 GSE117944.KDM1A.K-562 234 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 234 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 234 bp overlap
ChIP K-562 ENCSR360HRA.KDM1A.K-562 77 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 234 bp overlap
ChIP K562 ENCFF128TYE 234 bp overlap
ChIP K562 ENCFF133OLU 149 bp overlap
KDM5B 1 dataset
ChIP SUM159 GSE46055.KDM5B.SUM159 99 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 218 bp overlap
KLF4 1 dataset
ChIP PDAC GSE64557.KLF4.PDAC 234 bp overlap
KLF6 1 dataset
ChIP PDAC GSE64557.KLF6.PDAC 223 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 73 bp overlap
L3MBTL2 1 dataset
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 234 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 193 bp overlap
MAX 3 datasets
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 118 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 131 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 192 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 234 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR113LAS.MTA2.K-562 234 bp overlap
ChIP K-562 ENCSR411UYA.MTA2.K-562 200 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 206 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EGJ.MYC.K-562 168 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 187 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 149 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 202 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 158 bp overlap
NCOR1 4 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 182 bp overlap
ChIP K562 ENCFF788MPU 234 bp overlap
ChIP K562 ENCFF866HRM 234 bp overlap
ChIP K562 ENCFF866HRM 102 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 230 bp overlap
OSR2 1 dataset
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 71 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 141 bp overlap
PGR 2 datasets
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 79 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 234 bp overlap
PHF21A 1 dataset
ChIP K562 ENCFF088QME 234 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 234 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 233 bp overlap
ChIP K562 ENCFF236IUS 234 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 62 bp overlap
RCOR1 2 datasets
ChIP HeLa-S3 ENCFF471KYI 234 bp overlap
ChIP K562 ENCFF216EEJ 234 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 159 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 234 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 205 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 161 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 234 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 234 bp overlap
SMARCA4 5 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 234 bp overlap
ChIP K562 ENCFF506JCB 234 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 230 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 158 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 213 bp overlap
SMARCE1 1 dataset
ChIP K-562 ENCSR157TCS.SMARCE1.K-562 234 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 99 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 234 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 218 bp overlap
TAL1 8 datasets
ChIP K-562 ENCSR106FRG.TAL1.K-562 234 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 199 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 152 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 205 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 209 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 226 bp overlap
ChIP K562 ENCFF620GMX 234 bp overlap
ChIP K562 ENCFF661CCK 205 bp overlap
TARDBP 1 dataset
ChIP GM12878 ENCSR412QBS.TARDBP.GM12878 234 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 183 bp overlap
ChIP K562 ENCFF931DJY 234 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 167 bp overlap
ChIP K562 ENCFF319QZT 234 bp overlap
UBTF 1 dataset
ChIP K-562 ENCSR000EFZ.UBTF.K-562 148 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 191 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 189 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BMH.YY1.K-562 98 bp overlap
ZBTB7A 2 datasets
ChIP Ishikawa ENCFF191NFH 124 bp overlap
ChIP K-562 GSE103445.ZBTB7A.K-562 92 bp overlap
ZC3H8 1 dataset
ChIP HCT-116 GSE47938.ZC3H8.HCT-116 53 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR322CFO.ZEB2.K-562 234 bp overlap
ChIP K-562 ENCSR004GKA.ZEB2.K-562 234 bp overlap
ChIP K562 ENCFF795CMH 170 bp overlap
ChIP K562 ENCFF975RXS 234 bp overlap
ZHX1 1 dataset
ChIP HeLa-S3 ENCSR887MXT.ZHX1.HeLa-S3 149 bp overlap
ZNF24 1 dataset
ChIP K-562 ENCSR695EQB.ZNF24.K-562 234 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 155 bp overlap
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