chr11 : 12,137,912 12,138,250
338 bp 94 TFs 0 linked genes
This 338 bp open chromatin element has no linked target genes and is bound by 94 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:12,132,912 – 12,143,250
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
94 transcription factors
Source
Cell type
AR 2 datasets
ChIP breast_tumor_Male_10 GSE104399.AR.breast_tumor_Male_10 54 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 162 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 112 bp overlap
ChIP MCF-7_parental GSE123284.ARID2.MCF-7_parental 174 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ARID2.MCF-7_parental_4-hydroxytamoxifen 201 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 338 bp overlap
ATF2 4 datasets
ChIP HEK293 ENCFF194VKZ 74 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 79 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 80 bp overlap
ChIP K562 ENCFF139ZZG 69 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 104 bp overlap
ChIP K562 ENCFF921JQW 227 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 320 bp overlap
ChIP K-562 ENCSR972ZBV.ATF7.K-562 155 bp overlap
ChIP K562 ENCFF308SKS 193 bp overlap
BHLHE40 2 datasets
ChIP IMR-90 ENCFF312JYK 59 bp overlap
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 236 bp overlap
BNC2 2 datasets
ChIP SK-N-SH ENCFF174EMC 245 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 120 bp overlap
BRD2 4 datasets
ChIP SUM159PT_DMSO GSE116879.BRD2.SUM159PT_DMSO 139 bp overlap
ChIP SUM159PT_JQ1 GSE116879.BRD2.SUM159PT_JQ1 128 bp overlap
ChIP SUM159PT_JQ1_MGSK2801 GSE116879.BRD2.SUM159PT_JQ1_MGSK2801 140 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 177 bp overlap
BRD3 1 dataset
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD3.K-562_iBET-BD2-IFNG 126 bp overlap
BRD4 13 datasets
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 108 bp overlap
ChIP IMR-90_PROLIF GSE74238.BRD4.IMR-90_PROLIF 62 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 80 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 177 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801 GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801 57 bp overlap
ChIP MDA-MB-231_JQ1_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_JQ1_MGSK2801_rDNA 57 bp overlap
ChIP MDA-MB-231_MGSK2801 GSE116879.BRD4.MDA-MB-231_MGSK2801 82 bp overlap
ChIP MDA-MB-231_MGSK2801_rDNA GSE116879.BRD4.MDA-MB-231_MGSK2801_rDNA 82 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 120 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 103 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 203 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 278 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 265 bp overlap
CHD1 1 dataset
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 217 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 146 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCFF867SAS 133 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 338 bp overlap
CTCF 8 datasets
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 68 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 73 bp overlap
ChIP aorta_thoracic ENCSR668BTN.CTCF.aorta_thoracic 145 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 79 bp overlap
ChIP skeletal muscle myoblast ENCFF813BQI 53 bp overlap
ChIP thoracic aorta ENCFF012WJQ 249 bp overlap
ChIP thoracic aorta ENCFF012WJQ 50 bp overlap
ChIP tibial artery ENCFF882IXS 102 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 61 bp overlap
DACH1 1 dataset
ChIP K-562 ENCSR030TJP.DACH1.K-562 151 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 318 bp overlap
ERG 4 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 141 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 279 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 171 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 106 bp overlap
ESR1 13 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 108 bp overlap
ChIP MCF-7_E2-10min-ERalpha GSE94023.ESR1.MCF-7_E2-10min-ERalpha 180 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 126 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 200 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 57 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 101 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 83 bp overlap
ChIP U2OS_E2 GSE26110.ESR1.U2OS_E2 72 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 59 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 288 bp overlap
ChIP breast_tumor_Male_14 GSE104399.ESR1.breast_tumor_Male_14 137 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 217 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 132 bp overlap
ESR2 1 dataset
ChIP MDA-MB-231_estradiol GSE108979.ESR2.MDA-MB-231_estradiol 57 bp overlap
ESRRA 2 datasets
ChIP SK-BR-3_EGF GSE81651.ESRRA.SK-BR-3_EGF 117 bp overlap
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 57 bp overlap
ETS1 1 dataset
ChIP 786-O GSE86092.ETS1.786-O 119 bp overlap
FOSL1 2 datasets
ChIP K562 ENCFF455MKD 338 bp overlap
ChIP K562 ENCFF455MKD 245 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 280 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 338 bp overlap
ChIP DE DE-FOXA2-2 338 bp overlap
FOXM1 1 dataset
ChIP SK-N-SH ENCFF404RGX 83 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 75 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 210 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 232 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 245 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 333 bp overlap
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 126 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 270 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 338 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 153 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 283 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 230 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 130 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 338 bp overlap
ChIP DE DE-GATA4-2 338 bp overlap
ChIP foregut GSE117136.GATA4.foregut 325 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 338 bp overlap
ChIP DE DE-GATA6-2 338 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 338 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 338 bp overlap
ChIP foregut GSE117136.GATA6.foregut 274 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 323 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 153 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 67 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 294 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 305 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 141 bp overlap
JUN 2 datasets
ChIP 786-O GSE86092.JUN.786-O 51 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 58 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 178 bp overlap
MAML1 1 dataset
ChIP SCC_4h GSE156486.MAML1.SCC_4h 60 bp overlap
MAX 3 datasets
ChIP Ishikawa ENCSR000BTY.MAX.Ishikawa 65 bp overlap
ChIP SK-N-SH ENCFF285LXR 121 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 62 bp overlap
MED1 5 datasets
ChIP MDA-MB-231_LQ_45min GSE95121.MED1.MDA-MB-231_LQ_45min 62 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 123 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 71 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 79 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 118 bp overlap
MED12 2 datasets
ChIP leiomyoma_PT886 GSE128230.MED12.leiomyoma_PT886 85 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 164 bp overlap
MYC 1 dataset
ChIP endothelial_umbilical-vein ENCSR000DLU.MYC.endothelial_umbilical-vein 79 bp overlap
MYCN 1 dataset
ChIP MYCN-3_low GSE83317.MYCN.MYCN-3_low 51 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 337 bp overlap
NCAPH2 1 dataset
ChIP RMG-I GSE120058.NCAPH2.RMG-I 217 bp overlap
NR2F2 4 datasets
ChIP liver ENCFF565JGD 197 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 92 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 80 bp overlap
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 91 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_DEX_IA1 GSE125623.NR3C1.BEAS-2B_DEX_IA1 105 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 204 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 81 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 150 bp overlap
POLR2A 1 dataset
ChIP transverse colon ENCFF607LKE 118 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 138 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 306 bp overlap
RAD21 5 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 183 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 75 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 50 bp overlap
ChIP K562 ENCFF634XYR 111 bp overlap
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 171 bp overlap
RARA 1 dataset
Motif DE_48h DE_48h-RARA_MA0730.1 17 bp overlap
RELA 18 datasets
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 170 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 338 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 232 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 271 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 325 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 313 bp overlap
ChIP aortic-endothelial-cell_IL1B_D24 GSE139377.RELA.aortic-endothelial-cell_IL1B_D24 133 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 145 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 198 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 111 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 308 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 54 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 293 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 292 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 92 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 279 bp overlap
REST 1 dataset
ChIP PFSK-1 ENCFF845VHA 137 bp overlap
RXRA 1 dataset
ChIP SK-N-SH ENCFF893DLM 64 bp overlap
Rarb 1 dataset
Motif DE_48h DE_48h-Rarb_MA0858.1 17 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 338 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 338 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 338 bp overlap
SMAD4 1 dataset
ChIP K562 ENCFF628RBP 338 bp overlap
SMARCA4 5 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 302 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 79 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 246 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 264 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 219 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 88 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 338 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 149 bp overlap
SOX10 1 dataset
Motif DE_48h DE_48h-SOX10_MA0442.3 6 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 335 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 338 bp overlap
SOX2 4 datasets
ChIP HNSC GSE69479.SOX2.HNSC 338 bp overlap
ChIP TT GSE46837.SOX2.TT 175 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 261 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 326 bp overlap
ChIP K562 ENCFF059YCJ 215 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 155 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 133 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 148 bp overlap
TAL1 2 datasets
ChIP CD34 GSE52924.TAL1.CD34 104 bp overlap
ChIP PRIMA5 GSE33850.TAL1.PRIMA5 227 bp overlap
TBX21 4 datasets
ChIP GM12878 ENCFF951HUW 338 bp overlap
ChIP GM12878 ENCFF951HUW 256 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 338 bp overlap
ChIP Th1_CD3-CD28_donor2 GSE81881.TBX21.Th1_CD3-CD28_donor2 227 bp overlap
THAP1 1 dataset
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
TRIM28 1 dataset
ChIP HEK293 ENCFF265CEM 238 bp overlap
XRCC5 2 datasets
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 180 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 180 bp overlap
YY1 1 dataset
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 52 bp overlap
ZFP3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 196 bp overlap
ZKSCAN8 2 datasets
ChIP K562 ENCFF387ETI 338 bp overlap
ChIP K562 ENCFF387ETI 338 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 57 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 117 bp overlap
ZNF639 2 datasets
ChIP K562 ENCFF271FQR 132 bp overlap
ChIP K562 ENCFF271FQR 338 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 54 bp overlap
Znf423 1 dataset
Motif DE_48h DE_48h-Znf423_MA0116.1 15 bp overlap