chr9 : 121,675,079 121,675,349
270 bp 81 TFs 0 linked genes
This 270 bp open chromatin element has no linked target genes and is bound by 81 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:121,670,079 – 121,680,349
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP RMG-I GSE104545.ARID1A.RMG-I 270 bp overlap
ChIP RMG-I GSE120058.ARID1A.RMG-I 235 bp overlap
ATF3 2 datasets
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 223 bp overlap
ChIP HCT-116_DMSO GSE74355.ATF3.HCT-116_DMSO 126 bp overlap
BACH1 3 datasets
ChIP AsPC-1 GSE124406.BACH1.AsPC-1 174 bp overlap
ChIP SW1990 GSE124406.BACH1.SW1990 133 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 133 bp overlap
BCOR 2 datasets
ChIP WA01 GSE104690.BCOR.WA01 176 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 162 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 54 bp overlap
BRD4 1 dataset
ChIP THP-1_iBET-BD1-PMA GSE138084.BRD4.THP-1_iBET-BD1-PMA 225 bp overlap
CDKN1B 2 datasets
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 206 bp overlap
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 171 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 174 bp overlap
CEBPB 2 datasets
ChIP IMR-90 ENCFF468UGY 251 bp overlap
ChIP MV4-11 GSE88746.CEBPB.MV4-11 216 bp overlap
CHD2 1 dataset
ChIP HeLa-S3 ENCSR000ECP.CHD2.HeLa-S3 94 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 169 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 62 bp overlap
DPF2 1 dataset
ChIP SCCOHT-1 GSE117734.DPF2.SCCOHT-1 246 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 157 bp overlap
ESRRA 1 dataset
ChIP SK-BR-3_HRG GSE81651.ESRRA.SK-BR-3_HRG 203 bp overlap
ETS1 1 dataset
ChIP SCC-25 GSE109884.ETS1.SCC-25 171 bp overlap
EZH2 2 datasets
ChIP Karpas-422_CPI360-D8 GSE134136.EZH2.Karpas-422_CPI360-D8 108 bp overlap
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 270 bp overlap
FLI1 2 datasets
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 84 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 140 bp overlap
FOS 6 datasets
ChIP IMR-90 ENCFF179EDA 261 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 253 bp overlap
ChIP MCF-7 ENCFF282FWZ 258 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 270 bp overlap
ChIP endothelial cell of umbilical vein ENCFF415XBG 270 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 221 bp overlap
FOSL1 2 datasets
ChIP HCT-116 ENCSR000BTE.FOSL1.HCT-116 182 bp overlap
ChIP HCT116 ENCFF540ZXN 270 bp overlap
FOSL2 11 datasets
ChIP A-549 ENCSR000BQO.FOSL2.A-549 144 bp overlap
ChIP Hep-G2 ENCSR000BHP.FOSL2.Hep-G2 157 bp overlap
ChIP HepG2 ENCFF548CXY 171 bp overlap
ChIP HepG2 ENCFF796NIA 207 bp overlap
ChIP LPS141 GSE111253.FOSL2.LPS141 270 bp overlap
ChIP MCF-7 ENCFF716UWP 212 bp overlap
ChIP MCF-7 ENCSR000BUI.FOSL2.MCF-7 150 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 270 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 234 bp overlap
ChIP SK-N-SH ENCFF127ZDW 239 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 220 bp overlap
GATA6 4 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 263 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 270 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 270 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 270 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 270 bp overlap
GLIS2 3 datasets
Motif DE_12h DE_12h-GLIS2_MA0736.1 14 bp overlap
ChIP HEK293 ENCFF446EIF 270 bp overlap
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 270 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 270 bp overlap
HIC1 1 dataset
ChIP HEK293 ENCSR803GYT.HIC1.HEK293 270 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 157 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 270 bp overlap
JUN 17 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 270 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 270 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 270 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 270 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 270 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 270 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 270 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 199 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 134 bp overlap
ChIP HAEC_oxpapc_4h GSE89970.JUN.HAEC_oxpapc_4h 137 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 270 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 74 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 219 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 204 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 205 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 166 bp overlap
JUND 9 datasets
ChIP H1 ENCFF010YXS 270 bp overlap
ChIP H1 ENCFF468JZD 217 bp overlap
ChIP HeLa-S3 ENCSR000EDH.JUND.HeLa-S3 138 bp overlap
ChIP SK-N-SH ENCFF551NEQ 256 bp overlap
ChIP SK-N-SH ENCFF971JKN 247 bp overlap
ChIP SK-N-SH ENCSR000EIB.JUND.SK-N-SH 196 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 170 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 210 bp overlap
ChIP WA01 ENCSR000BKP.JUND.WA01 163 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 57 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 66 bp overlap
MAFK 1 dataset
ChIP IMR-90 ENCFF336DHZ 196 bp overlap
MAZ 3 datasets
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 270 bp overlap
ChIP HEK293 GSE76494.MAZ.HEK293 229 bp overlap
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 159 bp overlap
MED1 1 dataset
ChIP U-87MG GSE36354.MED1.U-87MG 270 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 192 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 270 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 178 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 206 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 270 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 238 bp overlap
NFE2L2 2 datasets
ChIP IMR-90 ENCFF059WEE 203 bp overlap
ChIP IMR-90 ENCSR197WGI.NFE2L2.IMR-90 106 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 270 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 115 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 270 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 270 bp overlap
RAD21 3 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 146 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 64 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 266 bp overlap
RCOR1 1 dataset
ChIP IMR-90 ENCSR000EFG.RCOR1.IMR-90 179 bp overlap
RELA 20 datasets
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 187 bp overlap
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 166 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 154 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 254 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 244 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 190 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 204 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 237 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 182 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 206 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 171 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 199 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 217 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 192 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 158 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 154 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 168 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 170 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 174 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 251 bp overlap
SIN3A 3 datasets
ChIP WA01 ENCSR000BIS.SIN3A.WA01 135 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 180 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 213 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 270 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 270 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 255 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 270 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 270 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 264 bp overlap
SMAD3 4 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 170 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 216 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 218 bp overlap
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 223 bp overlap
SMARCA4 9 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 123 bp overlap
ChIP Aska-SS GSE108025.SMARCA4.Aska-SS 266 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 174 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 270 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 243 bp overlap
ChIP TTC-1240_SMARCB1-FL GSE124903.SMARCA4.TTC-1240_SMARCB1-FL 201 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 226 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 270 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 270 bp overlap
SMARCB1 3 datasets
ChIP HeLa-S3 ENCSR000EDK.SMARCB1.HeLa-S3 187 bp overlap
ChIP hiPSC GSE124903.SMARCB1.hiPSC 146 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 203 bp overlap
SMARCC1 7 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 254 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 83 bp overlap
ChIP SCCOHT-1 GSE117734.SMARCC1.SCCOHT-1 176 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 226 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 260 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 242 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 212 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 121 bp overlap
SP7 1 dataset
ChIP HEK293 ENCSR468IJT.SP7.HEK293 270 bp overlap
SPI1 1 dataset
ChIP THP-1_DIFF GSE25426.SPI1.THP-1_DIFF 106 bp overlap
SS18 1 dataset
ChIP SYO-1_shSSX GSE108025.SS18.SYO-1_shSSX 203 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 212 bp overlap
STAT3 2 datasets
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 138 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 187 bp overlap
SUZ12 1 dataset
ChIP Karpas-422_CPI360-D8 GSE134136.SUZ12.Karpas-422_CPI360-D8 88 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 231 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 270 bp overlap
TCF7L2 2 datasets
ChIP HCT-116 ENCSR000EUV.TCF7L2.HCT-116 250 bp overlap
ChIP HCT116 ENCFF038POZ 255 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 177 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 270 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 267 bp overlap
TP53 2 datasets
ChIP MDA-MB-231 GSE95303.TP53.MDA-MB-231 143 bp overlap
ChIP SaOS-2 GSE15780.TP53.SaOS-2 157 bp overlap
YY1 2 datasets
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 163 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 218 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 181 bp overlap
ZEB2 2 datasets
ChIP HEK293 ENCFF847JIE 270 bp overlap
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 270 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 270 bp overlap
ZIC2 2 datasets
ChIP HEK293 ENCFF033NQQ 242 bp overlap
ChIP HEK293 ENCFF033NQQ 245 bp overlap
ZNF148 1 dataset
ChIP K-562 GSE121133.ZNF148.K-562 119 bp overlap
ZNF398 2 datasets
ChIP H9 GSE133630.ZNF398.H9 140 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 83 bp overlap
ZNF416 1 dataset
Motif DE_12h DE_12h-ZNF416_MA1979.2 10 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 176 bp overlap
ZNF816 1 dataset
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Zfp961 1 dataset
Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap