chr1:156,845,268–156,845,794

chr1 : 156,845,268 – 156,845,794

526 bp 73 TFs 12 linked genes

This 526 bp open chromatin element is linked to 12 target genes and is bound by 73 transcription factors.

Linked Genes

12 genes

Gene	Expression	Dist. to TSS	Distance	Link type
PRCC		78.0 kb	Distal	Multiome
HDGF		93.1 kb	Distal	Multiome
MRPL24		104.5 kb	Distal	Multiome
METTL25B		117.1 kb	Distal	Multiome
ISG20L2		117.1 kb	Distal	Multiome
CRABP2		139.7 kb	Distal	Multiome
NES		168.1 kb	Distal	Multiome
ARHGEF11		200.2 kb	Distal	Multiome
GPATCH4		244.1 kb	Distal	Multiome
NAXE		253.8 kb	Distal	Multiome
IQGAP3		273.0 kb	Distal	Multiome
ETV3		292.8 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

73 transcription factors

ChIP GM01310_DMSO GSE116632.AHR.GM01310_DMSO 119 bp overlap

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 67 bp overlap

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 155 bp overlap

ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 161 bp overlap

ChIP prostate_cancer-associated-fibroblasts GSE90772.AR.prostate_cancer-associated-fibroblasts 111 bp overlap

ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 95 bp overlap

ARNTL 1 dataset

ChIP NSC_hNP1 GSE134972.ARNTL.NSC_hNP1 526 bp overlap

BCL11A 1 dataset

ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 526 bp overlap

BRD4 5 datasets

ChIP CLL_patient2_4h_CpG_BET GSE109411.BRD4.CLL_patient2_4h_CpG_BET 203 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 199 bp overlap

ChIP T-47D ERP003925.BRD4.T-47D 450 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 526 bp overlap

ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 119 bp overlap

CBFB 2 datasets

ChIP ME-1 GSE46044.CBFB.ME-1 95 bp overlap

ChIP ME-1 GSE46044.CBFB.ME-1 145 bp overlap

ChIP hMSC GSE117084.CBX4.hMSC 77 bp overlap

CHD1 2 datasets

ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 68 bp overlap

ChIP hMSC-TERT GSE89179.CHD1.hMSC-TERT 137 bp overlap

CTCF 37 datasets

ChIP 22Rv1 ENCFF466OXN 401 bp overlap

ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 248 bp overlap

ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 526 bp overlap

ChIP BJ ENCSR000DQI.CTCF.BJ 181 bp overlap

ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 136 bp overlap

ChIP GM04648 GSE148179.CTCF.GM04648 190 bp overlap

ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 158 bp overlap

ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 206 bp overlap

ChIP GM12866 ENCSR000DRF.CTCF.GM12866 138 bp overlap

ChIP GM12871 ENCSR000DRL.CTCF.GM12871 125 bp overlap

ChIP GM12875 ENCSR000DRU.CTCF.GM12875 137 bp overlap

ChIP HSPC-CD34 GSE107147.CTCF.HSPC-CD34 166 bp overlap

ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 196 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 168 bp overlap

ChIP MM1-S GSE43743.CTCF.MM1-S 218 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 148 bp overlap

ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 117 bp overlap

ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 116 bp overlap

ChIP brain microvascular endothelial cell ENCFF526VHE 241 bp overlap

ChIP cardiac muscle cell ENCFF728JSA 264 bp overlap

ChIP cardiac_muscle ENCSR000DTI.CTCF.cardiac_muscle 198 bp overlap

ChIP choroid plexus epithelial cell ENCFF407YNR 236 bp overlap

ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 132 bp overlap

ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 205 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 195 bp overlap

ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 120 bp overlap

ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 199 bp overlap

ChIP fibroblast of lung ENCFF505HVQ 230 bp overlap

ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 108 bp overlap

ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 124 bp overlap

ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 142 bp overlap

ChIP hESC_D5 GSE116862.CTCF.hESC_D5 345 bp overlap

ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 247 bp overlap

ChIP keratinocyte GSE154221.CTCF.keratinocyte 526 bp overlap

ChIP neural progenitor cell ENCFF420RBO 313 bp overlap

ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 201 bp overlap

ChIP retinal pigment epithelial cell ENCFF810AAG 225 bp overlap

ChIP K-562 ENCSR000EWL.E2F4.K-562 98 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 245 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 245 bp overlap

EBF1 2 datasets

ChIP GM12878 ENCFF813OXE 176 bp overlap

ChIP MUTUL GSE75503.EBF1.MUTUL 72 bp overlap

EGR1 5 datasets

ChIP A-375 GSE116190.EGR1.A-375 264 bp overlap

ChIP K-562 ENCSR024CNP.EGR1.K-562 240 bp overlap

ChIP K-562 ENCSR000BNE.EGR1.K-562 192 bp overlap

ChIP K562 ENCFF006PJY 245 bp overlap

ChIP K562 ENCFF895KGN 385 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000AUQ.EP300.WA01 116 bp overlap

ESR1 3 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 103 bp overlap

ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 259 bp overlap

ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 308 bp overlap

EZH2 26 datasets

ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 526 bp overlap

ChIP GM23338 ENCFF613YON 71 bp overlap

ChIP GM23338 ENCFF613YON 206 bp overlap

ChIP GM23338 ENCFF886DXX 104 bp overlap

ChIP H1 ENCFF232NZA 401 bp overlap

ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 241 bp overlap

ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 246 bp overlap

ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 150 bp overlap

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 287 bp overlap

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 69 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 255 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 206 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 212 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 258 bp overlap

ChIP fibroblast of dermis ENCFF029VZK 520 bp overlap

ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 156 bp overlap

ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 318 bp overlap

ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 167 bp overlap

ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 195 bp overlap

ChIP hESC GSE113817.EZH2.hESC 73 bp overlap

ChIP keratinocyte ENCFF070STK 312 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 196 bp overlap

ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 188 bp overlap

ChIP neural progenitor cell ENCFF018MKA 328 bp overlap

ChIP neural progenitor cell ENCFF018MKA 367 bp overlap

ChIP neural progenitor cell ENCFF472NFV 526 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 526 bp overlap

ChIP UAE GSE23730.FLI1.UAE 88 bp overlap

GTF2F1 2 datasets

ChIP K-562 ENCSR377BLZ.GTF2F1.K-562 118 bp overlap

ChIP K-562 GSE120104.GTF2F1.K-562 124 bp overlap

HDAC2 2 datasets

ChIP WA01 ENCSR000AVB.HDAC2.WA01 196 bp overlap

ChIP WA01 ENCSR000AVB.HDAC2.WA01 125 bp overlap

HEXIM1 2 datasets

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 138 bp overlap

ChIP HCT-116 GSE72622.HEXIM1.HCT-116 298 bp overlap

HIF1A 2 datasets

ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 191 bp overlap

ChIP BEAS-2B_arsenic GSE145834.HIF1A.BEAS-2B_arsenic 101 bp overlap

HNRNPLL 2 datasets

ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 112 bp overlap

ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 142 bp overlap

ChIP K-562 ENCSR000EGT.IRF1.K-562 157 bp overlap

JARID2 6 datasets

ChIP AMIPS8 GSE48516.JARID2.AMIPS8 155 bp overlap

ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 141 bp overlap

ChIP UTEIPS11 GSE48516.JARID2.UTEIPS11 185 bp overlap

ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 70 bp overlap

ChIP UTEIPS6 GSE48516.JARID2.UTEIPS6 409 bp overlap

ChIP UTEIPS7 GSE48516.JARID2.UTEIPS7 354 bp overlap

ChIP Karpas-299 GSE151413.JUN.Karpas-299 119 bp overlap

KDM4A 6 datasets

ChIP H1 ENCFF078LED 143 bp overlap

ChIP H1 ENCFF078LED 471 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 237 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 239 bp overlap

ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 200 bp overlap

ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 64 bp overlap

KDM6B 1 dataset

ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 50 bp overlap

KLF1 2 datasets

ChIP HEK293 ENCFF159QSW 136 bp overlap

ChIP HEK293 ENCSR859BMR.KLF1.HEK293 418 bp overlap

KLF14 1 dataset

ChIP HEK293 ENCSR780ESQ.KLF14.HEK293 206 bp overlap

KLF17 1 dataset

ChIP HEK293 ENCSR065WUF.KLF17.HEK293 190 bp overlap

ChIP keratinocyte GSE140991.KLF3.keratinocyte 519 bp overlap

ChIP HEK293 ENCSR635NOQ.KLF8.HEK293 201 bp overlap

KLF9 3 datasets

ChIP GBM1A GSE62211.KLF9.GBM1A 118 bp overlap

ChIP GBM1A GSE62211.KLF9.GBM1A 136 bp overlap

ChIP HEK293 ENCSR076EZB.KLF9.HEK293 251 bp overlap

ChIP H1 ENCFF914VQY 338 bp overlap

ChIP HeLa GSE41006.MBD2.HeLa 67 bp overlap

MYOD1 1 dataset

ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 309 bp overlap

NCAPH2 2 datasets

ChIP HEK293 GSE97540.NCAPH2.HEK293 65 bp overlap

ChIP HEK293 GSE97540.NCAPH2.HEK293 76 bp overlap

NELFE 1 dataset

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 133 bp overlap

NFKB1 3 datasets

ChIP HEK293T GSE129618.NFKB1.HEK293T 411 bp overlap

ChIP HEK293T GSE129618.NFKB1.HEK293T 53 bp overlap

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 107 bp overlap

ChIP K-562 ENCSR837EYC.NRF1.K-562 114 bp overlap

OGG1 5 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 187 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 160 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 158 bp overlap

ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 111 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 165 bp overlap

PCBP1 3 datasets

ChIP K-562 ENCSR052PTN.PCBP1.K-562 169 bp overlap

ChIP K-562 ENCSR052PTN.PCBP1.K-562 210 bp overlap

ChIP K-562 GSE120104.PCBP1.K-562 209 bp overlap

POU2F1 2 datasets

ChIP T-47D GSE148277.POU2F1.T-47D 110 bp overlap

ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 66 bp overlap

POU5F1 6 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 229 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 110 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 237 bp overlap

ChIP SKM-1 GSE93706.POU5F1.SKM-1 133 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 62 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 61 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 526 bp overlap

RBBP5 2 datasets

ChIP WA01 ENCSR000AQC.RBBP5.WA01 156 bp overlap

ChIP WA01 ENCSR000AQC.RBBP5.WA01 126 bp overlap

RNF2 6 datasets

ChIP WA01 ENCSR784VUY.RNF2.WA01 72 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 62 bp overlap

ChIP WA09 GSE105028.RNF2.WA09 270 bp overlap

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 138 bp overlap

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 327 bp overlap

ChIP fibroblast GSE139053.RNF2.fibroblast 232 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 526 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 526 bp overlap

RUNX1 3 datasets

ChIP AML_Blast GSE60130.RUNX1.AML_Blast 135 bp overlap

ChIP CD34 GSE64862.RUNX1.CD34 135 bp overlap

ChIP Jurkat GSE85524.RUNX1.Jurkat 172 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 108 bp overlap

SMARCA4 2 datasets

ChIP 22Rv1 GSE115615.SMARCA4.22Rv1 106 bp overlap

ChIP 22Rv1_PTEN-KO GSE115615.SMARCA4.22Rv1_PTEN-KO 171 bp overlap

SNAI2 1 dataset

ChIP keratinocyte_LacZ GSE55421.SNAI2.keratinocyte_LacZ 204 bp overlap

ChIP H1 ENCFF263FUH 118 bp overlap

ChIP H1 ENCFF263FUH 318 bp overlap

ChIP WTC11 ENCFF688PEU 446 bp overlap

ChIP HEK293 GSE76494.SP4.HEK293 394 bp overlap

SREBP2 3 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 526 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 124 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 351 bp overlap

STAT3 1 dataset

ChIP WA01 ERP004237.STAT3.WA01 95 bp overlap

SUZ12 2 datasets

ChIP H1 ENCFF881NFR 355 bp overlap

ChIP WA01 ENCSR000ATS.SUZ12.WA01 170 bp overlap

TAF15 4 datasets

ChIP Hep-G2 GSE120104.TAF15.Hep-G2 165 bp overlap

ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 158 bp overlap

ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 85 bp overlap

ChIP Hep-G2 GSE120104.TAF15.Hep-G2 85 bp overlap

ChIP hiPSC_WTb_RNase-pos GSE128135.TBP.hiPSC_WTb_RNase-pos 82 bp overlap

TFIIIC 2 datasets

ChIP HEK293 GSE119418.TFIIIC.HEK293 65 bp overlap

ChIP HEK293 GSE119418.TFIIIC.HEK293 199 bp overlap

ChIP WTC11 ENCFF359JCU 329 bp overlap

TP63 2 datasets

ChIP keratinocyte GSE33571.TP63.keratinocyte 134 bp overlap

ChIP keratinocyte GSE33571.TP63.keratinocyte 114 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 53 bp overlap

TRIM28 1 dataset

ChIP AF22 GSE84259.TRIM28.AF22 148 bp overlap

ChIP WTC11 ENCFF699QGS 382 bp overlap

WDR5 2 datasets

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 116 bp overlap

ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 123 bp overlap

ZBTB33 3 datasets

ChIP K-562 ENCSR876GXA.ZBTB33.K-562 526 bp overlap

ChIP K562 ENCFF427SDV 221 bp overlap

ChIP K562 ENCFF875HLX 269 bp overlap

ChIP HEK293T_22Rv1 GSE145160.ZFX.HEK293T_22Rv1 526 bp overlap

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 526 bp overlap

ZNF184 1 dataset

ChIP WTC11 ENCFF352POG 400 bp overlap

ZNF263 1 dataset

ChIP K-562 ENCSR000EWN.ZNF263.K-562 210 bp overlap

ZNF707 1 dataset

ChIP HEK293T GSE78099.ZNF707.HEK293T 201 bp overlap