chr6 : 32,973,916 – 32,974,189
273 bp 88 TFs 4 linked genes
This 273 bp open chromatin element is linked to 4 target genes and is bound by 88 transcription factors.
Linked Genes
4 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000263756 1.1 kb Proximal Proximity
ENSG00000223837 3.7 kb Proximal Proximity
BRD2 5.3 kb Proximal Proximity
HLA-DMA 5.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:32,968,916 – 32,979,189
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 273 bp overlap
ChIP HepG2 ENCFF773YDL 273 bp overlap
AR 2 datasets
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 273 bp overlap
ChIP LTAD_EtOH GSE94577.AR.LTAD_EtOH 273 bp overlap
ARID2 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 91 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 54 bp overlap
ChIP HepG2 ENCFF317ZHO 69 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 207 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 66 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 119 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 94 bp overlap
BRD4 5 datasets
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 255 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 273 bp overlap
ChIP SUM159PT_300nMJQ1_24h GSE87418.BRD4.SUM159PT_300nMJQ1_24h 105 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 273 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 252 bp overlap
CHD1 4 datasets
ChIP A-549 ENCSR398YBM.CHD1.A-549 149 bp overlap
ChIP H1 ENCFF998XEK 273 bp overlap
ChIP IMR-90 ENCSR000EFC.CHD1.IMR-90 209 bp overlap
ChIP WA01 ENCSR000EBU.CHD1.WA01 127 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF093OYK 185 bp overlap
DMTF1 1 dataset
ChIP K562 ENCFF947QUY 116 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 99 bp overlap
EHF 1 dataset
ChIP RWPE-1 GSE114241.EHF.RWPE-1 273 bp overlap
ETS1 3 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 201 bp overlap
ChIP OVCAR-8 GSE101832.ETS1.OVCAR-8 71 bp overlap
ChIP THP-6_shCtrl GSE138516.ETS1.THP-6_shCtrl 249 bp overlap
EZH2 1 dataset
ChIP peripheral-blood-mononuclear-cell GSE115772.EZH2.peripheral-blood-mononuclear-cell 236 bp overlap
FOXA1 1 dataset
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 59 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 190 bp overlap
FOXP1 1 dataset
ChIP B-cell_IgD-pos GSE114803.FOXP1.B-cell_IgD-pos 133 bp overlap
HDAC1 3 datasets
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 87 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 52 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.HDAC1.MCF-7_ARID1A-KO_clone14 138 bp overlap
HDGF 2 datasets
ChIP K-562 ENCSR197ALX.HDGF.K-562 224 bp overlap
ChIP K-562 ENCSR563YDA.HDGF.K-562 60 bp overlap
HNRNPK 1 dataset
ChIP HepG2 ENCFF493GNS 190 bp overlap
HOXB13 6 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 72 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 60 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 240 bp overlap
ChIP prostate_P27_T GSE130408.HOXB13.prostate_P27_T 70 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 273 bp overlap
ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 201 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 273 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 200 bp overlap
KDM1A 1 dataset
ChIP HepG2 ENCFF240UWG 273 bp overlap
KLF17 1 dataset
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 72 bp overlap
KLF9 1 dataset
ChIP HEK293 ENCFF588INF 76 bp overlap
KMT2A 2 datasets
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 170 bp overlap
ChIP blood_cord GSE83671.KMT2A.blood_cord 273 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCFF994GSG 141 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 216 bp overlap
MLLT1_FKB 1 dataset
ChIP MV4-11 GSE82116.MLLT1_FKB.MV4-11 273 bp overlap
MXI1 6 datasets
ChIP GM12878 ENCFF666NJR 273 bp overlap
ChIP IMR-90 ENCFF040YVH 247 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 183 bp overlap
ChIP SK-N-SH ENCFF746HVJ 59 bp overlap
ChIP SK-N-SH ENCFF746HVJ 273 bp overlap
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 137 bp overlap
NEUROD1 4 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 103 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 117 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 113 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 273 bp overlap
NFATC1 1 dataset
ChIP GM12878 ENCSR000BQL.NFATC1.GM12878 273 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 239 bp overlap
NONO 3 datasets
ChIP K562 ENCFF782TAA 162 bp overlap
ChIP K562 ENCFF782TAA 273 bp overlap
ChIP K562 ENCFF844WQC 162 bp overlap
PAF1 1 dataset
ChIP HepG2 ENCFF949UAN 139 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 129 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 200 bp overlap
PHF8 1 dataset
ChIP K562 ENCFF217UCA 273 bp overlap
PHIP 3 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 273 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 215 bp overlap
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 210 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 273 bp overlap
POLR2A 14 datasets
ChIP GM12878 ENCFF263VRI 273 bp overlap
ChIP GM12878 ENCFF412KAE 273 bp overlap
ChIP GM18526 ENCFF599EPS 246 bp overlap
ChIP H1 ENCFF566JSR 273 bp overlap
ChIP HeLa-S3 ENCFF773DNG 273 bp overlap
ChIP HepG2 ENCFF252NAR 241 bp overlap
ChIP HepG2 ENCFF350RIU 134 bp overlap
ChIP adrenal gland ENCFF843OBJ 273 bp overlap
ChIP body of pancreas ENCFF501FEC 273 bp overlap
ChIP body of pancreas ENCFF675RCN 273 bp overlap
ChIP breast epithelium ENCFF960NNA 123 bp overlap
ChIP sigmoid colon ENCFF653CQA 273 bp overlap
ChIP thyroid gland ENCFF979LRR 273 bp overlap
ChIP transverse colon ENCFF098HBD 273 bp overlap
POLR2G 2 datasets
ChIP HepG2 ENCFF241AEG 148 bp overlap
ChIP HepG2 ENCFF508UTS 147 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCFF283AJL 273 bp overlap
PRPF4 1 dataset
ChIP K562 ENCFF202AJJ 273 bp overlap
RAD21 4 datasets
ChIP THP-1_PMA_Dex-0h GSE103477.RAD21.THP-1_PMA_Dex-0h 203 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 233 bp overlap
ChIP peripheral-blood-neutrophil_PMA-1 GSE126755.RAD21.peripheral-blood-neutrophil_PMA-1 219 bp overlap
ChIP peripheral-blood-neutrophil_US-1 GSE126755.RAD21.peripheral-blood-neutrophil_US-1 231 bp overlap
RBFOX2 6 datasets
ChIP HepG2 ENCFF554DMZ 273 bp overlap
ChIP HepG2 ENCFF939HTZ 273 bp overlap
ChIP K562 ENCFF196WTG 273 bp overlap
ChIP K562 ENCFF196WTG 273 bp overlap
ChIP K562 ENCFF967GRF 273 bp overlap
ChIP K562 ENCFF967GRF 273 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 273 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 265 bp overlap
RELA 5 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 173 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 176 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 194 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 273 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 273 bp overlap
REST 2 datasets
ChIP HEK293 ENCFF073DOT 59 bp overlap
ChIP colorectal-cancer_shCDH1 GSE112555.REST.colorectal-cancer_shCDH1 69 bp overlap
RFX1 5 datasets
ChIP K-562 ENCSR041AXL.RFX1.K-562 273 bp overlap
ChIP K-562 ENCSR968GIB.RFX1.K-562 273 bp overlap
ChIP K562 ENCFF809XVG 269 bp overlap
ChIP MCF-7 ENCFF782EZS 250 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 273 bp overlap
RUNX1 3 datasets
ChIP 697 GSE138031.RUNX1.697 226 bp overlap
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 227 bp overlap
ChIP NALM-6 GSE126300.RUNX1.NALM-6 205 bp overlap
RUNX1T1 1 dataset
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 213 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 273 bp overlap
RUVBL2 2 datasets
ChIP Hep-G2 GSE107730.RUVBL2.Hep-G2 246 bp overlap
ChIP Hep-G2 GSE97411.RUVBL2.Hep-G2 222 bp overlap
SALL2 1 dataset
ChIP HepG2 ENCFF458XOD 139 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 166 bp overlap
SFPQ 1 dataset
ChIP K562 ENCFF705JNE 139 bp overlap
SIN3A 9 datasets
ChIP A-549 ENCSR000BRM.SIN3A.A-549 237 bp overlap
ChIP GM12878 ENCFF238GUI 76 bp overlap
ChIP Hep-G2 ENCSR000BGL.SIN3A.Hep-G2 116 bp overlap
ChIP K562 ENCFF984TCS 75 bp overlap
ChIP MCF-7 ENCSR000BUM.SIN3A.MCF-7 223 bp overlap
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 223 bp overlap
ChIP PFSK1 ENCSR000BOY.SIN3A.PFSK1 109 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 259 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 125 bp overlap
SMAD3 1 dataset
ChIP H69_4TGF GSE145250.SMAD3.H69_4TGF 148 bp overlap
SMAD5 2 datasets
ChIP GM12878 ENCFF178LKN 83 bp overlap
ChIP GM12878 ENCFF178LKN 273 bp overlap
SMARCA4 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 273 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 161 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 245 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 54 bp overlap
SMC3 1 dataset
ChIP IMR-90 ENCSR000HPG.SMC3.IMR-90 224 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 273 bp overlap
SREBP2 1 dataset
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 181 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SS18.BIN-67_lentivirus-SMARCA4-K785R 71 bp overlap
STAT5A 1 dataset
ChIP K562 ENCFF226BTJ 51 bp overlap
SUPT5H 1 dataset
ChIP DLD-1_NELFCD-AID_treated GSE144786.SUPT5H.DLD-1_NELFCD-AID_treated 273 bp overlap
TAF1 3 datasets
ChIP HeLa-S3 ENCFF556LCN 225 bp overlap
ChIP HeLa-S3 ENCSR000BHT.TAF1.HeLa-S3 171 bp overlap
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 273 bp overlap
TBP 2 datasets
ChIP hESC_10h GSE122298.TBP.hESC_10h 273 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 271 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 209 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 130 bp overlap
TP53 1 dataset
ChIP SW480_0h_TNFa GSE102796.TP53.SW480_0h_TNFa 113 bp overlap
WDR5 1 dataset
ChIP breast-cancer_shLuc GSE113279.WDR5.breast-cancer_shLuc 167 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 241 bp overlap
YY1 2 datasets
ChIP K-562 ENCSR000BMH.YY1.K-562 113 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 193 bp overlap
ZBTB40 1 dataset
ChIP K-562 ENCSR237VLT.ZBTB40.K-562 86 bp overlap
ZFP36L1 1 dataset
ChIP HepG2 ENCFF375BAZ 61 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 161 bp overlap
ZNF142 1 dataset
ChIP HepG2 ENCFF422TCB 174 bp overlap
ZNF221 1 dataset
ChIP HepG2 ENCFF374BUN 208 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 273 bp overlap
ZNF335 4 datasets
ChIP HEK293 ENCFF784SLD 144 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 144 bp overlap
ChIP HepG2 ENCFF539IIQ 54 bp overlap
ChIP HepG2 ENCFF539IIQ 273 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 186 bp overlap
ZNF518A 2 datasets
ChIP HEK293 ENCFF892ULS 255 bp overlap
ChIP HEK293 ENCSR159GFL.ZNF518A.HEK293 134 bp overlap
ZNF629 1 dataset
ChIP HEK293 ENCSR351NON.ZNF629.HEK293 153 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 270 bp overlap
ZNF692 1 dataset
ChIP HEK293 ENCSR418MKG.ZNF692.HEK293 126 bp overlap
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