chr6 : 28,848,781 – 28,849,080
299 bp 66 TFs 1 linked gene
This 299 bp open chromatin element is linked to ENSG00000225173 and is bound by 66 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000225173 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:28,843,781 – 28,854,080
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP K562 ENCFF099BVK 237 bp overlap
ARID4B 1 dataset
ChIP K562 ENCFF791HBV 299 bp overlap
ATF1 1 dataset
ChIP K562 ENCFF817JQF 298 bp overlap
ATF7 1 dataset
ChIP K562 ENCFF308SKS 299 bp overlap
BRD4 1 dataset
ChIP K-562_iBET-BD1-IFNG GSE138084.BRD4.K-562_iBET-BD1-IFNG 150 bp overlap
CBFB 2 datasets
ChIP K562 ENCFF145YWG 243 bp overlap
ChIP K562 ENCFF145YWG 250 bp overlap
CC2D1A 1 dataset
ChIP K562 ENCFF567XUT 299 bp overlap
CEBPG 2 datasets
ChIP K562 ENCFF651CMK 205 bp overlap
ChIP K562 ENCFF651CMK 131 bp overlap
CTBP1 1 dataset
ChIP K562 ENCFF403WPG 168 bp overlap
CTCF 132 datasets
ChIP 22Rv1 ENCFF466OXN 299 bp overlap
ChIP 22Rv1 ENCFF466OXN 250 bp overlap
ChIP A673 ENCFF123WOM 299 bp overlap
ChIP BE2C ENCFF757SRF 293 bp overlap
ChIP C4-2B ENCFF821XVN 299 bp overlap
ChIP C4-2B ENCFF821XVN 299 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 299 bp overlap
ChIP CD14-positive monocyte ENCFF087XLR 272 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 299 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 299 bp overlap
ChIP CD4-positive, alpha-beta T cell ENCFF277LDE 212 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 299 bp overlap
ChIP CD8-positive, alpha-beta T cell ENCFF092PSD 184 bp overlap
ChIP D721Med ENCFF513FYD 211 bp overlap
ChIP DND-41 ENCFF913MRA 141 bp overlap
ChIP DOHH2 ENCFF637WNW 299 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 183 bp overlap
ChIP GM06990 ENCFF471OQT 272 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 138 bp overlap
ChIP GM12864 ENCFF357DQE 277 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 103 bp overlap
ChIP GM12872 ENCFF697BYI 285 bp overlap
ChIP GM12873 ENCFF711LOS 248 bp overlap
ChIP GM12878 ENCFF485TGR 251 bp overlap
ChIP GM13977 ENCFF528ESQ 171 bp overlap
ChIP GM20000 ENCFF217HWJ 165 bp overlap
ChIP GM23338 ENCFF531QOI 143 bp overlap
ChIP GM23338 ENCFF531QOI 69 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF414GZI 189 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 248 bp overlap
ChIP HCT116 ENCFF003KHP 299 bp overlap
ChIP HCT116 ENCFF209YMI 265 bp overlap
ChIP HCT116 ENCFF373YMA 233 bp overlap
ChIP HEK293 ENCFF498RMM 261 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 191 bp overlap
ChIP HFFc6 ENCFF005CJI 299 bp overlap
ChIP HFFc6 ENCFF005CJI 196 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 80 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 299 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 187 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 209 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP HepG2 ENCFF194VBQ 234 bp overlap
ChIP HepG2 ENCFF348BUL 197 bp overlap
ChIP HepG2 ENCFF757EKU 212 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 247 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 188 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 119 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 131 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 123 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 110 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 110 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 93 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 299 bp overlap
ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 147 bp overlap
ChIP K-562_RF2-mutation GSE140868.CTCF.K-562_RF2-mutation 179 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 206 bp overlap
ChIP K-562_WT GSE140868.CTCF.K-562_WT 96 bp overlap
ChIP K562 ENCFF082GOI 185 bp overlap
ChIP K562 ENCFF111MGE 108 bp overlap
ChIP K562 ENCFF400DFR 88 bp overlap
ChIP K562 ENCFF430KTH 270 bp overlap
ChIP K562 ENCFF430KTH 64 bp overlap
ChIP K562 ENCFF598YSU 256 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 194 bp overlap
ChIP LNCAP ENCFF700QXT 299 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP Loucy ENCFF359TVQ 219 bp overlap
ChIP Loucy ENCFF359TVQ 96 bp overlap
ChIP MCF-7 ENCFF162GNE 236 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF210JUZ 145 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 ENCFF844STM 191 bp overlap
ChIP MCF-7 ENCFF954TUV 205 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 170 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 239 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 213 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 187 bp overlap
ChIP NB4 ENCFF155DNY 251 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 127 bp overlap
ChIP NCI-H929 ENCFF305JAB 249 bp overlap
ChIP NCI-H929 ENCFF305JAB 152 bp overlap
ChIP OCI-LY1 ENCFF455ESK 163 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 279 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 259 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 209 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 180 bp overlap
ChIP PC-3 ENCFF487TUI 299 bp overlap
ChIP PC-3 ENCFF487TUI 138 bp overlap
ChIP PC-9 ENCFF539ULB 299 bp overlap
ChIP Panc1 ENCFF056JQX 253 bp overlap
ChIP Panc1 ENCFF056JQX 186 bp overlap
ChIP Peyer's patch ENCFF746TCR 251 bp overlap
ChIP Peyer's patch ENCFF828IDE 267 bp overlap
ChIP RWPE2 ENCFF911IEE 299 bp overlap
ChIP SK-N-SH ENCFF575DMG 299 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 281 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 189 bp overlap
ChIP VCaP ENCFF858YQT 299 bp overlap
ChIP VCaP ENCFF858YQT 224 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 109 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 231 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 191 bp overlap
ChIP WTC11 ENCFF658QVH 291 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 299 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 256 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 299 bp overlap
ChIP activated CD8-positive, alpha-beta T cell ENCFF006MHW 299 bp overlap
ChIP cardiac muscle cell ENCFF728JSA 185 bp overlap
ChIP endodermal cell ENCFF471YCZ 248 bp overlap
ChIP endodermal cell ENCFF471YCZ 137 bp overlap
ChIP endothelial cell ENCFF663LIE 299 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 299 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 180 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 113 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 153 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 299 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 263 bp overlap
ChIP heart right ventricle ENCFF767XJQ 299 bp overlap
ChIP hiPSC_IIIB12 GSE106870.CTCF.hiPSC_IIIB12 151 bp overlap
ChIP neural progenitor cell ENCFF420RBO 103 bp overlap
ChIP placenta ENCFF029PHY 299 bp overlap
ChIP right lobe of liver ENCFF011NDG 299 bp overlap
ChIP spleen ENCFF065CBS 299 bp overlap
ChIP spleen ENCFF326DUY 299 bp overlap
ChIP spleen ENCFF520HPZ 299 bp overlap
ChIP spleen ENCFF643KOU 297 bp overlap
ChIP spleen ENCFF653ONC 299 bp overlap
ChIP upper lobe of right lung ENCFF065JCM 299 bp overlap
CUX1 1 dataset
ChIP MCF-7 ENCFF779ATB 183 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 81 bp overlap
DEAF1 1 dataset
ChIP K562 ENCFF944USZ 277 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 156 bp overlap
EP400 1 dataset
ChIP K562 ENCFF850OZQ 299 bp overlap
FOXA3 1 dataset
ChIP K562 ENCFF348SOM 88 bp overlap
FOXC1 2 datasets
ChIP HepG2 ENCFF882ISP 299 bp overlap
ChIP HepG2 ENCFF882ISP 261 bp overlap
GABPB1 1 dataset
ChIP K562 ENCFF885NMS 299 bp overlap
GATA2 1 dataset
ChIP K562 ENCFF830LLA 236 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 91 bp overlap
ChIP K562 ENCFF968WBH 293 bp overlap
HDAC2 1 dataset
ChIP MCF-7 ENCFF881POI 287 bp overlap
HDGF 1 dataset
ChIP K562 ENCFF682FBH 161 bp overlap
HMBOX1 1 dataset
ChIP K562 ENCFF055GAZ 106 bp overlap
HMGXB4 2 datasets
ChIP HepG2 ENCFF179TAD 166 bp overlap
ChIP K562 ENCFF620JLK 299 bp overlap
IKZF1 3 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 141 bp overlap
ChIP K562 ENCFF348IBL 75 bp overlap
ChIP K562 ENCFF771OHZ 162 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 163 bp overlap
MAX 1 dataset
ChIP K562 ENCFF398VJM 299 bp overlap
MAZ 3 datasets
ChIP K562 ENCFF809XHP 299 bp overlap
ChIP K562 ENCFF809XHP 176 bp overlap
ChIP K562 ENCFF982GSZ 299 bp overlap
MEIS2 2 datasets
ChIP HepG2 ENCFF157BEH 298 bp overlap
ChIP K562 ENCFF320GSD 225 bp overlap
NCOA1 1 dataset
ChIP K562 ENCFF962VHQ 283 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 151 bp overlap
NFRKB 2 datasets
ChIP K562 ENCFF057YFW 183 bp overlap
ChIP K562 ENCFF057YFW 299 bp overlap
NFYB 1 dataset
ChIP K-562 ENCSR000EGQ.NFYB.K-562 223 bp overlap
PBX2 1 dataset
ChIP K562 ENCFF286KMN 286 bp overlap
PKNOX1 1 dataset
ChIP K562 ENCFF236IUS 157 bp overlap
RAD21 19 datasets
ChIP A549 ENCFF047SFC 239 bp overlap
ChIP GM12878 ENCFF101UQZ 191 bp overlap
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 107 bp overlap
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 227 bp overlap
ChIP HCT116 ENCFF568PEO 269 bp overlap
ChIP HeLa-S3 ENCFF775CHI 168 bp overlap
ChIP HepG2 ENCFF360ZSW 217 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
ChIP HepG2 ENCFF963UBJ 148 bp overlap
ChIP Ishikawa ENCFF570JVV 212 bp overlap
ChIP K-562 ENCSR000FAD.RAD21.K-562 182 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 173 bp overlap
ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 92 bp overlap
ChIP K562 ENCFF066JWO 200 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 250 bp overlap
ChIP MCF-7 ENCFF694KOM 269 bp overlap
ChIP MCF-7 ENCFF724VCQ 233 bp overlap
REST 1 dataset
ChIP K562 ENCFF688UKW 246 bp overlap
SKIL 1 dataset
ChIP K562 ENCFF560QSF 299 bp overlap
SMARCE1 1 dataset
ChIP K562 ENCFF690CFF 157 bp overlap
SMC3 3 datasets
ChIP HepG2 ENCFF745UAV 261 bp overlap
ChIP K-562 ENCSR000EGW.SMC3.K-562 114 bp overlap
ChIP K562 ENCFF582XIX 235 bp overlap
SOX6 1 dataset
ChIP K562 ENCFF059YCJ 299 bp overlap
SP1 1 dataset
ChIP K562 ENCFF088XXV 299 bp overlap
STAG1 2 datasets
ChIP HepG2 ENCFF843EBZ 148 bp overlap
ChIP K562 ENCFF674HJF 277 bp overlap
TEAD1 1 dataset
ChIP K562 ENCFF254RJL 299 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 299 bp overlap
TOE1 2 datasets
ChIP K562 ENCFF728FRA 191 bp overlap
ChIP K562 ENCFF728FRA 299 bp overlap
TRIM22 1 dataset
ChIP MCF-7 ENCFF596XRL 293 bp overlap
YY1 5 datasets
ChIP H1 ENCFF524BTL 241 bp overlap
ChIP K-562 ENCSR000BKU.YY1.K-562 158 bp overlap
ChIP K562 ENCFF199FNC 239 bp overlap
ChIP K562 ENCFF660QRE 101 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 134 bp overlap
ZBTB7A 1 dataset
ChIP K-562 ENCSR000BME.ZBTB7A.K-562 91 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 299 bp overlap
ZNF148 1 dataset
ChIP K562 ENCFF352SDL 299 bp overlap
ZNF217 2 datasets
ChIP MCF-7 ENCFF379OSU 292 bp overlap
ChIP MCF-7 ENCSR465XQW.ZNF217.MCF-7 122 bp overlap
ZNF24 2 datasets
ChIP K562 ENCFF615YYW 153 bp overlap
ChIP K562 ENCFF615YYW 299 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 129 bp overlap
ZNF317 1 dataset
ChIP K562 ENCFF896LCF 299 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 299 bp overlap
ZNF341 2 datasets
ChIP HEK293 ENCFF944VMC 276 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 86 bp overlap
ZNF444 2 datasets
ChIP MCF-7 ENCFF602QFR 261 bp overlap
ChIP MCF-7 ENCSR038XIA.ZNF444.MCF-7 155 bp overlap
ZNF547 1 dataset
ChIP HepG2 ENCFF834XWI 299 bp overlap
ZNF574 1 dataset
ChIP HepG2 ENCFF206MMY 299 bp overlap
ZNF654 1 dataset
ChIP HEK293 ENCFF636WIC 186 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 299 bp overlap
ZNF766 1 dataset
ChIP K562 ENCFF348LDO 299 bp overlap
ZNF770 2 datasets
ChIP HEK293 ENCFF468FCG 120 bp overlap
ChIP HEK293 ENCSR242BGR.ZNF770.HEK293 217 bp overlap
ZNF772 1 dataset
ChIP HepG2 ENCFF728OGE 299 bp overlap
ZSCAN31 1 dataset
ChIP HepG2 ENCFF066FRL 299 bp overlap
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