chr4 : 141,275,644 – 141,276,280
636 bp 103 TFs 1 linked gene
This 636 bp open chromatin element is linked to ENSG00000248747 and is bound by 103 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000248747 2.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:141,270,644 – 141,281,280
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
103 transcription factors
Source
Cell type
AR 1 dataset
ChIP fibroblast_prostate-cancer_PCDF2 GSE126852.AR.fibroblast_prostate-cancer_PCDF2 431 bp overlap
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 396 bp overlap
ASCL1 1 dataset
Motif DE_60h DE_60h-ASCL1_MA1100.3 8 bp overlap
ATF3 1 dataset
ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 315 bp overlap
Ascl2 1 dataset
Motif DE_60h DE_60h-Ascl2_MA0816.1 10 bp overlap
BHLHE22 1 dataset
Motif DE_60h DE_60h-BHLHE22_MA1635.2 6 bp overlap
BHLHE40 1 dataset
ChIP IMR-90 ENCSR957KYB.BHLHE40.IMR-90 276 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 120 bp overlap
ChIP SUM159PT_MGSK2801 GSE116879.BRD2.SUM159PT_MGSK2801 327 bp overlap
BRD4 16 datasets
ChIP HeLa GSE151038.BRD4.HeLa 339 bp overlap
ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 231 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 263 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 158 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 457 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 336 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 291 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 507 bp overlap
ChIP SUM159PT_100nMtrametinib_24h GSE87418.BRD4.SUM159PT_100nMtrametinib_24h 625 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 396 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 636 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 469 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 442 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 485 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 228 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 414 bp overlap
Bhlha15 1 dataset
Motif DE_60h DE_60h-Bhlha15_MA1472.3 8 bp overlap
CBFA2T2 1 dataset
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 234 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 261 bp overlap
ChIP K562 ENCFF673OEZ 291 bp overlap
CHD7 2 datasets
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 469 bp overlap
ChIP hiPSC_derived_neural-crest-cell GSE108506.CHD7.hiPSC_derived_neural-crest-cell 181 bp overlap
CREB1 1 dataset
ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 300 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 302 bp overlap
E2F7 1 dataset
ChIP IMR-90_SENES_SHCTR GSE40343.E2F7.IMR-90_SENES_SHCTR 141 bp overlap
EP300 6 datasets
ChIP AML GSE131939.EP300.AML 128 bp overlap
ChIP Kasumi-1 GSE115115.EP300.Kasumi-1 163 bp overlap
ChIP SK-N-SH ENCFF451CNG 385 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 364 bp overlap
ChIP fibroblast_proliferating GSE106146.EP300.fibroblast_proliferating 188 bp overlap
ChIP fibroblast_senescent GSE106146.EP300.fibroblast_senescent 375 bp overlap
ERG 4 datasets
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 135 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 217 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 226 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 154 bp overlap
ETV2 1 dataset
ChIP induced-endothelial-cell_Veh GSE123906.ETV2.induced-endothelial-cell_Veh 69 bp overlap
FERD3L 1 dataset
Motif DE_60h DE_60h-FERD3L_MA1485.1 14 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 158 bp overlap
FOS 5 datasets
ChIP CFPAC-1 GSE119930.FOS.CFPAC-1 276 bp overlap
ChIP IMR-90 ENCFF179EDA 297 bp overlap
ChIP IMR-90 ENCSR124AIG.FOS.IMR-90 245 bp overlap
ChIP MCF-7 ENCSR569XNP.FOS.MCF-7 231 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 252 bp overlap
FOSL2 6 datasets
ChIP LPS141 GSE111253.FOSL2.LPS141 334 bp overlap
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 510 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 284 bp overlap
ChIP SK-N-SH ENCFF127ZDW 285 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 152 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 344 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 261 bp overlap
ChIP DE DE-FOXA2-2 357 bp overlap
FOXE1 1 dataset
Motif DE_60h DE_60h-FOXE1_MA1487.3 12 bp overlap
FOXK2 1 dataset
ChIP K-562 ENCSR508DQA.FOXK2.K-562 214 bp overlap
FOXL2 3 datasets
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 269 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 326 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 405 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 524 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 331 bp overlap
Foxj3 1 dataset
Motif DE_60h DE_60h-Foxj3_MA0851.2 9 bp overlap
GATA1 1 dataset
ChIP erythroid-progenitor GSE124163.GATA1.erythroid-progenitor 217 bp overlap
GATA2 5 datasets
Motif DE_60h DE_60h-GATA2_MA0036.4 7 bp overlap
ChIP ESF GSE108408.GATA2.ESF 419 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 255 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 487 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 279 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 140 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 266 bp overlap
ChIP DE DE-GATA4-2 336 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 147 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 280 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 636 bp overlap
GATA5 1 dataset
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 261 bp overlap
ChIP DE DE-GATA6-2 380 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP foregut GSE117136.GATA6.foregut 201 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 243 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 271 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 315 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 138 bp overlap
Gata3 1 dataset
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR711VWL.HDAC1.K-562 228 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 228 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 292 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 252 bp overlap
JUN 1 dataset
ChIP primary-lung-fibroblast GSE114844.JUN.primary-lung-fibroblast 150 bp overlap
JUNB 1 dataset
ChIP MCF10A-Er-Src_EtOH GSE115597.JUNB.MCF10A-Er-Src_EtOH 131 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 321 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 303 bp overlap
KDM1A 2 datasets
ChIP SKNO-1_RN1 GSE71739.KDM1A.SKNO-1_RN1 71 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 215 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 251 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 232 bp overlap
LMO2 4 datasets
ChIP Kasumi-1 GSE43834.LMO2.Kasumi-1 206 bp overlap
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 248 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 145 bp overlap
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 237 bp overlap
LYL1 2 datasets
ChIP Kasumi-1 GSE63484.LYL1.Kasumi-1 142 bp overlap
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 182 bp overlap
MAZ 1 dataset
ChIP IMR-90 ENCSR000EFF.MAZ.IMR-90 117 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 183 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 236 bp overlap
MLLT1 1 dataset
ChIP K-562 ENCSR107GRP.MLLT1.K-562 339 bp overlap
MTA2 2 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 270 bp overlap
ChIP RH4 GSE155861.MTA2.RH4 373 bp overlap
MYF5 1 dataset
Motif DE_60h DE_60h-MYF5_MA1641.2 8 bp overlap
MYOD1 2 datasets
Motif DE_60h DE_60h-MYOD1_MA0499.3 9 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 229 bp overlap
MYOG 2 datasets
Motif DE_60h DE_60h-MYOG_MA0500.3 8 bp overlap
ChIP RH4 GSE83726.MYOG.RH4 253 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 128 bp overlap
NHLH1 1 dataset
Motif DE_60h DE_60h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_60h DE_60h-NHLH2_MA1529.2 16 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 248 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 260 bp overlap
Neurod2 1 dataset
Motif DE_60h DE_60h-Neurod2_MA1993.2 6 bp overlap
Olig2 1 dataset
Motif DE_60h DE_60h-Olig2_MA1997.2 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 166 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 191 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
PPARG 1 dataset
Motif DE_60h DE_60h-PPARG_MA0066.2 19 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 255 bp overlap
Ptf1A 1 dataset
Motif DE_60h DE_60h-Ptf1A_MA1619.2 8 bp overlap
RORA 1 dataset
Motif DE_60h DE_60h-RORA_MA0072.2 11 bp overlap
RORB 1 dataset
Motif DE_60h DE_60h-RORB_MA1150.2 10 bp overlap
RORC 1 dataset
Motif DE_60h DE_60h-RORC_MA1151.2 10 bp overlap
RUNX1 2 datasets
ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 131 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 194 bp overlap
RUNX1T1 2 datasets
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 187 bp overlap
ChIP Kasumi-1_shTAF1-AE GSE115115.RUNX1T1.Kasumi-1_shTAF1-AE 239 bp overlap
RUNX2 1 dataset
ChIP PER-117 GSE151819.RUNX2.PER-117 279 bp overlap
Runx1 1 dataset
Motif DE_60h DE_60h-Runx1_MA0002.3 9 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
SMAD3 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3.PC-3_hypoxia 348 bp overlap
SMAD3-HIF1A 1 dataset
ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 185 bp overlap
SMARCA2 5 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 461 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 200 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 258 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 331 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 480 bp overlap
SMARCA4 10 datasets
ChIP A-549_AG15678 GSE132290.SMARCA4.A-549_AG15678 59 bp overlap
ChIP A-549_AG15721 GSE132290.SMARCA4.A-549_AG15721 95 bp overlap
ChIP A-549_AG15722 GSE132290.SMARCA4.A-549_AG15722 53 bp overlap
ChIP A-549_AG15724 GSE132290.SMARCA4.A-549_AG15724 66 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 422 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 348 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 367 bp overlap
ChIP TTC-1240 GSE124903.SMARCA4.TTC-1240 580 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCA4.TTC-1240_R377H 636 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCA4.TTC-1240_delC 483 bp overlap
SMARCB1 4 datasets
ChIP TTC-1240_R377H GSE124903.SMARCB1.TTC-1240_R377H 193 bp overlap
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 412 bp overlap
ChIP proliferating-human-fibroblast_ASO_Ctrl GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_Ctrl 636 bp overlap
ChIP proliferating-human-fibroblast_ASO_LINC GSE131711.SMARCB1.proliferating-human-fibroblast_ASO_LINC 636 bp overlap
SMARCC1 5 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 217 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 296 bp overlap
ChIP TTC-1240 GSE124903.SMARCC1.TTC-1240 411 bp overlap
ChIP TTC-1240_R377H GSE124903.SMARCC1.TTC-1240_R377H 380 bp overlap
ChIP TTC-1240_delC GSE124903.SMARCC1.TTC-1240_delC 364 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 146 bp overlap
SOX8 2 datasets
ChIP RH4 GSE116344.SOX8.RH4 442 bp overlap
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 294 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 182 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 351 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 231 bp overlap
TAL1 5 datasets
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 297 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 200 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 142 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 177 bp overlap
ChIP TSU-1621MT GSE60477.TAL1.TSU-1621MT 206 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE43834.TCF12.Kasumi-1 288 bp overlap
ChIP SK-N-SH ENCFF147AHB 171 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 298 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 482 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 192 bp overlap
TEAD4 3 datasets
ChIP BJ_fibroblast_CD13-neg GSE114367.TEAD4.BJ_fibroblast_CD13-neg 294 bp overlap
ChIP BJ_fibroblast_CD13-pos GSE114367.TEAD4.BJ_fibroblast_CD13-pos 214 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 182 bp overlap
TFAP4 1 dataset
Motif DE_60h DE_60h-TFAP4_MA0691.1 10 bp overlap
TP53 1 dataset
ChIP U2OS_DMSO GSE46641.TP53.U2OS_DMSO 170 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 307 bp overlap
TRPS1 1 dataset
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
Tcf12 1 dataset
Motif DE_60h DE_60h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_60h DE_60h-Twist2_MA0633.3 6 bp overlap
USF2 2 datasets
ChIP IMR-90 ENCFF438KUN 257 bp overlap
ChIP IMR-90 ENCSR513UQG.USF2.IMR-90 172 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
YY1AP1 2 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 408 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 370 bp overlap
ZNF157 1 dataset
Motif DE_60h DE_60h-ZNF157_MA2331.1 21 bp overlap
ZNF205 1 dataset
ChIP HEK293T GSE78099.ZNF205.HEK293T 312 bp overlap
Zic2 1 dataset
Motif DE_60h DE_60h-Zic2_MA1629.2 9 bp overlap
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