chr3 : 172,391,288 – 172,391,826
538 bp 84 TFs 0 linked genes
This 538 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:172,386,288 – 172,396,826
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 300 bp overlap
ChIP K562 ENCFF938UXQ 281 bp overlap
ARID3A 2 datasets
ChIP K-562 ENCSR000EFY.ARID3A.K-562 164 bp overlap
ChIP K-562 ENCSR000EFY.ARID3A.K-562 232 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 93 bp overlap
BRD3 1 dataset
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 73 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 265 bp overlap
ChIP K562 ENCFF963TXY 218 bp overlap
CBFA2T3 3 datasets
ChIP K-562 GSE142227.CBFA2T3.K-562 381 bp overlap
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 308 bp overlap
ChIP K562 ENCFF673OEZ 288 bp overlap
CCNT2 2 datasets
ChIP K-562 ENCSR000DOA.CCNT2.K-562 162 bp overlap
ChIP K562 ENCFF199GSZ 278 bp overlap
CEBPB 3 datasets
ChIP K-562 ENCSR000BRQ.CEBPB.K-562 135 bp overlap
ChIP K-562 ENCSR000EHE.CEBPB.K-562 109 bp overlap
ChIP K562 ENCFF584CTB 88 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 194 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CREB1 2 datasets
ChIP K-562 ENCSR000BSO.CREB1.K-562 138 bp overlap
ChIP K562 ENCFF175LMX 260 bp overlap
CTCF 2 datasets
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 146 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 320 bp overlap
DDX20 2 datasets
ChIP K-562 ENCSR446LAV.DDX20.K-562 204 bp overlap
ChIP K562 ENCFF205RDN 185 bp overlap
DPF2 4 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.DPF2.BIN-67_lentivirus-SMARCA4-T910M 205 bp overlap
ChIP K-562 ENCSR219BXP.DPF2.K-562 234 bp overlap
ChIP K562 ENCFF739JDE 330 bp overlap
ChIP K562 ENCFF775HUO 229 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 97 bp overlap
EP300 2 datasets
ChIP K-562 ENCSR000EGE.EP300.K-562 197 bp overlap
ChIP K562 ENCFF226VMS 202 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 441 bp overlap
ChIP DE DE-FOXA2-2 433 bp overlap
FOXM1 1 dataset
ChIP K562 ENCFF255RHV 205 bp overlap
GABPA 2 datasets
ChIP K-562 ENCSR000BLO.GABPA.K-562 165 bp overlap
ChIP K562 ENCFF996TSW 228 bp overlap
GATA1 13 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 218 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 177 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 189 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 90 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 307 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 167 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 232 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 237 bp overlap
ChIP K562 ENCFF094CMK 241 bp overlap
ChIP erythroblast ENCFF867JAR 230 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 395 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 218 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 238 bp overlap
GATA2 9 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 191 bp overlap
ChIP CD34_DMSO GSE60792.GATA2.CD34_DMSO 208 bp overlap
ChIP K-562 ENCSR000DKA.GATA2.K-562 330 bp overlap
ChIP K-562 ENCSR000BKM.GATA2.K-562 220 bp overlap
ChIP K-562 ENCSR000EWG.GATA2.K-562 136 bp overlap
ChIP K562 ENCFF088XQT 240 bp overlap
ChIP K562 ENCFF544PCK 187 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 78 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 389 bp overlap
GATA4 4 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 191 bp overlap
ChIP DE DE-GATA4-1 398 bp overlap
ChIP DE DE-GATA4-2 490 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 296 bp overlap
GATA6 3 datasets
ChIP AGS GSE51705.GATA6.AGS 237 bp overlap
ChIP DE DE-GATA6-1 406 bp overlap
ChIP DE DE-GATA6-2 454 bp overlap
GFI1B 2 datasets
ChIP K-562 ENCSR509GDT.GFI1B.K-562 161 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 153 bp overlap
HDAC1 4 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 213 bp overlap
ChIP K-562 ENCSR711VWL.HDAC1.K-562 194 bp overlap
ChIP K562 ENCFF928TKZ 97 bp overlap
ChIP K562 ENCFF968WBH 158 bp overlap
HDAC2 4 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 262 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 258 bp overlap
ChIP K562 ENCFF744ALD 225 bp overlap
ChIP K562 ENCFF919OMP 125 bp overlap
HDAC3 2 datasets
ChIP K-562 ENCSR024LKA.HDAC3.K-562 182 bp overlap
ChIP K562 ENCFF713GIR 252 bp overlap
HOXB8 1 dataset
ChIP K-562 GSE121208.HOXB8.K-562 175 bp overlap
IKZF1 1 dataset
ChIP K-562 ENCSR395HWC.IKZF1.K-562 89 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 325 bp overlap
JUND 1 dataset
ChIP K-562 ENCSR000EGN.JUND.K-562 111 bp overlap
KDM1A 8 datasets
ChIP K-562 ENCSR360HRA.KDM1A.K-562 282 bp overlap
ChIP K-562 ENCSR908CMW.KDM1A.K-562 280 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 268 bp overlap
ChIP K-562 ENCSR000ATX.KDM1A.K-562 224 bp overlap
ChIP K-562_Wnt GSE117944.KDM1A.K-562_Wnt 296 bp overlap
ChIP K562 ENCFF128TYE 215 bp overlap
ChIP K562 ENCFF133OLU 201 bp overlap
ChIP K562 ENCFF934ZRG 315 bp overlap
KLF16 2 datasets
ChIP K-562 ENCSR760UVO.KLF16.K-562 195 bp overlap
ChIP K562 ENCFF464PIV 209 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 158 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 439 bp overlap
LEF1 2 datasets
ChIP K562 ENCFF198WCP 279 bp overlap
ChIP K562 ENCFF889WGL 296 bp overlap
MAFF 2 datasets
ChIP K-562 ENCSR000EGI.MAFF.K-562 89 bp overlap
ChIP K562 ENCFF071YKK 153 bp overlap
MAFG 2 datasets
ChIP K-562 ENCSR818DQV.MAFG.K-562 220 bp overlap
ChIP K562 ENCFF455EEO 231 bp overlap
MEF2A 2 datasets
ChIP K-562 ENCSR000BNV.MEF2A.K-562 77 bp overlap
ChIP K562 ENCFF903PRO 113 bp overlap
MEIS1 1 dataset
ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 191 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 266 bp overlap
ChIP K562 ENCFF320GSD 193 bp overlap
MNT 2 datasets
ChIP Hep-G2 ENCSR730TBC.MNT.Hep-G2 287 bp overlap
ChIP K-562 ENCSR390VGH.MNT.K-562 182 bp overlap
MTA2 3 datasets
ChIP K-562 ENCSR411UYA.MTA2.K-562 195 bp overlap
ChIP K-562 ENCSR113LAS.MTA2.K-562 182 bp overlap
ChIP K562 ENCFF880VZB 158 bp overlap
MYB 1 dataset
ChIP DU528 GSE94000.MYB.DU528 224 bp overlap
MYC 1 dataset
ChIP K-562 ENCSR000EZU.MYC.K-562 135 bp overlap
NBN 1 dataset
ChIP K-562 ENCSR085QEV.NBN.K-562 256 bp overlap
NCOA1 3 datasets
ChIP K-562 ENCSR931HNY.NCOA1.K-562 143 bp overlap
ChIP K562 ENCFF395XLS 234 bp overlap
ChIP K562 ENCFF962VHQ 226 bp overlap
NCOR1 5 datasets
ChIP K-562 ENCSR798ILC.NCOR1.K-562 236 bp overlap
ChIP K-562 ENCSR910JAI.NCOR1.K-562 235 bp overlap
ChIP K562 ENCFF359DNT 243 bp overlap
ChIP K562 ENCFF788MPU 216 bp overlap
ChIP K562 ENCFF866HRM 199 bp overlap
NFE2 4 datasets
ChIP K-562 ENCSR552YGL.NFE2.K-562 254 bp overlap
ChIP K-562 ENCSR000FCC.NFE2.K-562 163 bp overlap
ChIP K562 ENCFF047YKA 210 bp overlap
ChIP K562 ENCFF163BSI 143 bp overlap
NFE2L2 1 dataset
ChIP K-562 ENCSR485GKE.NFE2L2.K-562 124 bp overlap
NFIC 2 datasets
ChIP K-562 ENCSR796ITY.NFIC.K-562 193 bp overlap
ChIP K562 ENCFF167YID 263 bp overlap
NOTCH1 1 dataset
ChIP CD34 GSE63010.NOTCH1.CD34 202 bp overlap
NR2F2 2 datasets
ChIP K-562 ENCSR000BRS.NR2F2.K-562 282 bp overlap
ChIP K562 ENCFF004YPK 247 bp overlap
PBX2 1 dataset
ChIP K-562 ENCSR263DFP.PBX2.K-562 265 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 231 bp overlap
ChIP K562 ENCFF236IUS 266 bp overlap
PML 2 datasets
ChIP K-562 ENCSR000BQY.PML.K-562 308 bp overlap
ChIP K562 ENCFF801LKH 180 bp overlap
POLR2A 1 dataset
ChIP K562 ENCFF514URW 131 bp overlap
POU5F1 2 datasets
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 113 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 83 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF561IAJ 229 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 224 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 169 bp overlap
RCOR1 3 datasets
ChIP K-562 ENCSR000EGC.RCOR1.K-562 137 bp overlap
ChIP K562 ENCFF216EEJ 205 bp overlap
ChIP K562 ENCFF721RTS 230 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 245 bp overlap
REST 2 datasets
ChIP K-562 ENCSR000BMW.REST.K-562 184 bp overlap
ChIP K562 ENCFF430APM 227 bp overlap
RNF2 1 dataset
ChIP K562 ENCFF653BQJ 336 bp overlap
RXR 1 dataset
ChIP LS180_125 GSE31939.RXR.LS180_125 114 bp overlap
SMARCA2 2 datasets
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 108 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 122 bp overlap
SMARCA4 7 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 223 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 171 bp overlap
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 267 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 163 bp overlap
ChIP K562 ENCFF316MCJ 226 bp overlap
ChIP K562 ENCFF357NOJ 274 bp overlap
ChIP K562 ENCFF506JCB 166 bp overlap
SMARCC1 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 140 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 371 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 440 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 227 bp overlap
ChIP K562 ENCFF059YCJ 249 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 459 bp overlap
STAT1 2 datasets
ChIP K-562 ENCSR000EHJ.STAT1.K-562 115 bp overlap
ChIP K-562 ENCSR000EHK.STAT1.K-562 80 bp overlap
STAT3 1 dataset
ChIP HCC1187 GSE152203.STAT3.HCC1187 184 bp overlap
STAT5A 2 datasets
ChIP K-562 ENCSR000BRR.STAT5A.K-562 213 bp overlap
ChIP K562 ENCFF226BTJ 149 bp overlap
STAT5B 2 datasets
ChIP CD8_H9 GSE64713.STAT5B.CD8_H9 98 bp overlap
ChIP CD8_IL2 GSE64713.STAT5B.CD8_IL2 117 bp overlap
TAL1 17 datasets
ChIP CD34 GSE52924.TAL1.CD34 189 bp overlap
ChIP CHRF28811 ERP008568.TAL1.CHRF28811 263 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 200 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 297 bp overlap
ChIP K-562 ENCSR106FRG.TAL1.K-562 261 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 249 bp overlap
ChIP K-562_MYO1D-Hub_KO GSE107726.TAL1.K-562_MYO1D-Hub_KO 195 bp overlap
ChIP K-562_MYO1D-Non-hub_KO GSE107726.TAL1.K-562_MYO1D-Non-hub_KO 155 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 209 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 216 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 209 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 220 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 218 bp overlap
ChIP K562 ENCFF620GMX 218 bp overlap
ChIP K562 ENCFF661CCK 154 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 172 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 179 bp overlap
TBL1XR1 2 datasets
ChIP K-562 ENCSR000EGB.TBL1XR1.K-562 135 bp overlap
ChIP K562 ENCFF899VEC 190 bp overlap
TCF12 4 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 212 bp overlap
ChIP K-562 ENCSR189TRZ.TCF12.K-562 182 bp overlap
ChIP K562 ENCFF909RDY 234 bp overlap
ChIP K562 ENCFF931DJY 187 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 228 bp overlap
ChIP K562 ENCFF319QZT 176 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 145 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 197 bp overlap
TRIM24 2 datasets
ChIP K-562 ENCSR907MZR.TRIM24.K-562 167 bp overlap
ChIP K562 ENCFF616RIL 259 bp overlap
TRIM28 1 dataset
ChIP K-562 ENCSR000BRW.TRIM28.K-562 153 bp overlap
ZEB2 4 datasets
ChIP K-562 ENCSR004GKA.ZEB2.K-562 293 bp overlap
ChIP K-562 ENCSR322CFO.ZEB2.K-562 264 bp overlap
ChIP K562 ENCFF795CMH 324 bp overlap
ChIP K562 ENCFF975RXS 335 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 209 bp overlap
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