chr3 : 172,208,976 172,209,322
346 bp 70 TFs 0 linked genes
This 346 bp open chromatin element has no linked target genes and is bound by 70 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:172,203,976 – 172,214,322
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
70 transcription factors
Source
Cell type
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 346 bp overlap
ChIP HepG2 ENCFF773YDL 346 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 159 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 278 bp overlap
BRD2 1 dataset
ChIP THP-1_iBET GSE138084.BRD2.THP-1_iBET 326 bp overlap
BRD4 2 datasets
ChIP SUM1315_DMSO GSE63581.BRD4.SUM1315_DMSO 220 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD4.THP-1_DMSO-PMA 133 bp overlap
CBFB 1 dataset
ChIP SaOS-2 GSE76937.CBFB.SaOS-2 87 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 160 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 119 bp overlap
CTCF 1 dataset
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 258 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF093OYK 54 bp overlap
ChIP BLaER1 ENCFF274GAT 170 bp overlap
ChIP BLaER1 ENCFF364PUR 89 bp overlap
ChIP BLaER1 ENCFF364PUR 60 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 261 bp overlap
ERG 4 datasets
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 113 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 236 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 265 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 197 bp overlap
ESR1 2 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 224 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 233 bp overlap
ETS1 5 datasets
ChIP HUVEC-C GSE109625.ETS1.HUVEC-C 220 bp overlap
ChIP HUVEC-C GSE93030.ETS1.HUVEC-C 220 bp overlap
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 190 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 190 bp overlap
ChIP SCC-25 GSE109884.ETS1.SCC-25 289 bp overlap
FLI1 2 datasets
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 346 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 290 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 346 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 346 bp overlap
HNRNPH1 2 datasets
ChIP Hep-G2 ENCSR066FXN.HNRNPH1.Hep-G2 157 bp overlap
ChIP Hep-G2 GSE120104.HNRNPH1.Hep-G2 157 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 346 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 171 bp overlap
IRF2 1 dataset
ChIP keratinocyte_DOX GSE135677.IRF2.keratinocyte_DOX 162 bp overlap
JUN 1 dataset
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 206 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 215 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 251 bp overlap
MAX 2 datasets
ChIP HepG2 ENCFF507HCX 346 bp overlap
ChIP HepG2 ENCFF507HCX 263 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 154 bp overlap
MYC 1 dataset
ChIP IMEC_MYC GSE86412.MYC.IMEC_MYC 322 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 80 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 126 bp overlap
NRF1 1 dataset
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 139 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 155 bp overlap
POLR2A 2 datasets
ChIP endothelial cell of umbilical vein ENCFF303XUJ 117 bp overlap
ChIP endothelial cell of umbilical vein ENCFF303XUJ 346 bp overlap
POLR2G 3 datasets
ChIP K562 ENCFF047BLG 173 bp overlap
ChIP K562 ENCFF648YPL 173 bp overlap
ChIP K562 ENCFF648YPL 346 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 164 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 143 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 346 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 243 bp overlap
RBM22 4 datasets
ChIP HepG2 ENCFF292RVQ 346 bp overlap
ChIP HepG2 ENCFF561IAJ 346 bp overlap
ChIP K-562 GSE120104.RBM22.K-562 346 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 346 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 346 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 346 bp overlap
RELA 10 datasets
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 191 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 194 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 130 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 115 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 158 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 132 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 165 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 78 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 180 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 167 bp overlap
REST 2 datasets
ChIP HEK293 ENCSR896UBV.REST.HEK293 203 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 103 bp overlap
RUNX1T1 3 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 346 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 277 bp overlap
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER_E2 135 bp overlap
SMC3 1 dataset
ChIP peripheral-blood-neutrophil_Ecoli-1 GSE126755.SMC3.peripheral-blood-neutrophil_Ecoli-1 132 bp overlap
SP1 2 datasets
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 118 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 136 bp overlap
SRSF3 1 dataset
ChIP K-562 GSE120104.SRSF3.K-562 219 bp overlap
SSRP1 1 dataset
ChIP Hep-G2 ENCSR571PDN.SSRP1.Hep-G2 127 bp overlap
STAT1 1 dataset
ChIP CD14_INFG_LPS GSE43036.STAT1.CD14_INFG_LPS 110 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 223 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 133 bp overlap
TBX5 1 dataset
Motif ES_0h ES_0h-TBX5_MA0807.1 8 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 178 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 127 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 346 bp overlap
TP63 4 datasets
ChIP SUIT-2 GSE115461.TP63.SUIT-2 221 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 141 bp overlap
ChIP keratinocyte_D7 GSE59824.TP63.keratinocyte_D7 172 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 182 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 110 bp overlap
U2AF1 1 dataset
ChIP Hep-G2 GSE120104.U2AF1.Hep-G2 186 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 302 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 227 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 165 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 143 bp overlap
ZKSCAN1 2 datasets
ChIP K-562 ENCSR882ERE.ZKSCAN1.K-562 169 bp overlap
ChIP K562 ENCFF977CBA 329 bp overlap
ZNF257 1 dataset
Motif ES_0h ES_0h-ZNF257_MA1710.2 10 bp overlap
ZNF587 1 dataset
ChIP WA01 GSE144149.ZNF587.WA01 170 bp overlap