chr3 : 62,378,330 62,378,861
531 bp 83 TFs 1 linked gene
This 531 bp open chromatin element is linked to FEZF2 and is bound by 83 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
FEZF2 5.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:62,373,330 – 62,383,861
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
83 transcription factors
Source
Cell type
AGO1 1 dataset
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 201 bp overlap
AR 2 datasets
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 193 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 140 bp overlap
ARID2 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.ARID2.NGP_ARID1A-mut2 209 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 531 bp overlap
BCOR 2 datasets
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 499 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 531 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 445 bp overlap
BRD4 6 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 231 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 111 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 531 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 531 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 390 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 531 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 233 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 359 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 214 bp overlap
CHD1 5 datasets
ChIP H1 ENCFF998XEK 512 bp overlap
ChIP H1 ENCFF998XEK 163 bp overlap
ChIP H1 ENCFF998XEK 309 bp overlap
ChIP WA01 ENCSR000AQK.CHD1.WA01 531 bp overlap
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 345 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 98 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 507 bp overlap
CTCF 5 datasets
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 255 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 131 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 131 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 187 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 286 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 276 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 186 bp overlap
EGR1 4 datasets
ChIP A-375 GSE116190.EGR1.A-375 263 bp overlap
ChIP H1 ENCFF451BLH 261 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 105 bp overlap
ChIP WA01 ENCSR000BJA.EGR1.WA01 126 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 297 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 178 bp overlap
ERG 2 datasets
ChIP MCF-7 GSE23730.ERG.MCF-7 239 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 247 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE48930.ESR1.MCF-7 205 bp overlap
ChIP MCF-7_DHT GSE99626.ESR1.MCF-7_DHT 227 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 462 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 531 bp overlap
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 112 bp overlap
ChIP MCF-7_Veh GSE93510.ESR1.MCF-7_Veh 353 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 379 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 460 bp overlap
ChIP MCF-7_vehicle_45min_I2 GSE99626.ESR1.MCF-7_vehicle_45min_I2 311 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 168 bp overlap
EZH2 34 datasets
ChIP A673 ENCFF790MVL 427 bp overlap
ChIP A673 ENCFF790MVL 527 bp overlap
ChIP A673 ENCFF955JRZ 419 bp overlap
ChIP GM23248 ENCFF506FWX 297 bp overlap
ChIP GM23248 ENCFF506FWX 445 bp overlap
ChIP GM23338 ENCFF613YON 497 bp overlap
ChIP GM23338 ENCFF886DXX 332 bp overlap
ChIP H1 ENCFF232NZA 531 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 444 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 452 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 293 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 292 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 531 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 521 bp overlap
ChIP T98G GSE112240.EZH2.T98G 348 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 455 bp overlap
ChIP astrocyte ENCFF365JTP 531 bp overlap
ChIP dermal-fibroblast_Preneoplastic GSE126396.EZH2.dermal-fibroblast_Preneoplastic 531 bp overlap
ChIP dermal-fibroblast_Untransformed GSE126396.EZH2.dermal-fibroblast_Untransformed 531 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 492 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 433 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 232 bp overlap
ChIP fibroblast of lung ENCFF479BAW 508 bp overlap
ChIP fibroblast of lung ENCFF479BAW 251 bp overlap
ChIP hepatocyte ENCFF118DKH 271 bp overlap
ChIP hepatocyte ENCFF118DKH 357 bp overlap
ChIP hepatocyte ENCFF552DZB 520 bp overlap
ChIP hepatocyte ENCFF552DZB 531 bp overlap
ChIP keratinocyte ENCFF070STK 531 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 491 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 531 bp overlap
ChIP neural cell ENCFF610EPB 401 bp overlap
ChIP neural progenitor cell ENCFF018MKA 531 bp overlap
ChIP neural progenitor cell ENCFF472NFV 531 bp overlap
GABPA 2 datasets
ChIP WA01 ENCSR000BIW.GABPA.WA01 133 bp overlap
ChIP WA01 ENCSR000BIW.GABPA.WA01 155 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 242 bp overlap
GATA6 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 206 bp overlap
GTF2F1 1 dataset
ChIP K-562 GSE120104.GTF2F1.K-562 153 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 338 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 416 bp overlap
HSF1 1 dataset
ChIP MCF-7 ENCFF586GQF 213 bp overlap
JARID2 4 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 531 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 443 bp overlap
ChIP MRC-5_IPS25 GSE48516.JARID2.MRC-5_IPS25 328 bp overlap
ChIP UTEIPS4 GSE48516.JARID2.UTEIPS4 510 bp overlap
JUN 1 dataset
ChIP HUES-8 GSE109524.JUN.HUES-8 328 bp overlap
KDM4A 3 datasets
ChIP H1 ENCFF078LED 531 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 402 bp overlap
ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 393 bp overlap
KDM5B 1 dataset
ChIP MCF-7 GSE46055.KDM5B.MCF-7 142 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 180 bp overlap
KLF4 1 dataset
ChIP WIBR3 GSE130417.KLF4.WIBR3 284 bp overlap
MED1 1 dataset
ChIP MCF-7_SHRARS_E2 GSE60270.MED1.MCF-7_SHRARS_E2 248 bp overlap
MITF 1 dataset
ChIP 501-mel_K243R GSE137522.MITF.501-mel_K243R 262 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCFF394LGD 311 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 253 bp overlap
NANOG 3 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 288 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 254 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 244 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 227 bp overlap
NEUROG2 2 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 225 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 206 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 418 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 293 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 362 bp overlap
POU5F1 8 datasets
ChIP BG03 GSE21614.POU5F1.BG03 319 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 499 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 531 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 347 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 210 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 300 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 330 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 242 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 431 bp overlap
PRDM14 2 datasets
ChIP NCCIT GSE71675.PRDM14.NCCIT 256 bp overlap
ChIP hESC GSE138674.PRDM14.hESC 181 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 531 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 486 bp overlap
RING1 2 datasets
ChIP SYO-1_shCt GSE139053.RING1.SYO-1_shCt 314 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RING1.SYO-1_shRING1A-B 416 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 484 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 213 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 144 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 235 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 218 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 396 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 377 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 409 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 429 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 353 bp overlap
SMARCA4 2 datasets
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 296 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 221 bp overlap
SMARCC1 2 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 519 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 442 bp overlap
SOX4 1 dataset
ChIP MRC-5_1DPT GSE75910.SOX4.MRC-5_1DPT 199 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 74 bp overlap
SP5 1 dataset
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 253 bp overlap
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 420 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 238 bp overlap
SUZ12 9 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 531 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 393 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 531 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 246 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 415 bp overlap
ChIP NT2/D1 ENCFF574SXS 369 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 422 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 349 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 167 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 207 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 207 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 288 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 440 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 289 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 418 bp overlap
TP63 3 datasets
ChIP breast-organoid GSE113909.TP63.breast-organoid 123 bp overlap
ChIP keratinocyte GSE33571.TP63.keratinocyte 145 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 141 bp overlap
TRIM28 2 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 195 bp overlap
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 150 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 393 bp overlap
ZBTB11 1 dataset
ChIP K562 ENCFF694AXU 317 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 340 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 442 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 227 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF460 1 dataset
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
ZNF485 1 dataset
ChIP HEK293T GSE78099.ZNF485.HEK293T 147 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap