chr3 : 8,882,072 8,882,855
783 bp 91 TFs 2 linked genes
This 783 bp open chromatin element is linked to RAD18 and OXTR and is bound by 91 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
RAD18 81.1 kb Distal Multiome
OXTR 112.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:8,877,072 – 8,887,855
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
91 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 174 bp overlap
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 582 bp overlap
ChIP 12Z GSE129781.ARID1A.12Z 121 bp overlap
ATF7 3 datasets
ChIP GM12878 ENCFF037PYH 477 bp overlap
ChIP GM12878 ENCFF037PYH 517 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 353 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 437 bp overlap
BRD4 4 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 153 bp overlap
ChIP K-562_iBET-BD2 GSE138084.BRD4.K-562_iBET-BD2 248 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 346 bp overlap
ChIP K-562_iBET-IFNG GSE138084.BRD4.K-562_iBET-IFNG 192 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 260 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 267 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 252 bp overlap
DACH1 1 dataset
ChIP K-562 ENCSR030TJP.DACH1.K-562 245 bp overlap
E2F6 2 datasets
Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap
Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap
E2F7 2 datasets
Motif DE_36h DE_36h-E2F7_MA0758.1 14 bp overlap
Motif DE_48h DE_48h-E2F7_MA0758.1 14 bp overlap
EBF1 4 datasets
ChIP GM12878 ENCFF167CZS 321 bp overlap
ChIP GM12878 ENCFF813OXE 265 bp overlap
ChIP GM12878 ENCSR000DZQ.EBF1.GM12878 204 bp overlap
ChIP LCL GSE75503.EBF1.LCL 472 bp overlap
ESR1 2 datasets
ChIP MCF-7_SHCTR_E2_TNF GSE59530.ESR1.MCF-7_SHCTR_E2_TNF 209 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 281 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 164 bp overlap
ETV7 1 dataset
Motif DE_36h DE_36h-ETV7_MA1708.2 9 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 178 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-2 74 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 167 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 155 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 547 bp overlap
ChIP DE DE-GATA4-2 595 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 569 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 497 bp overlap
GATA5 2 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 559 bp overlap
ChIP DE DE-GATA6-2 677 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 341 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 448 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 609 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 506 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 519 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 427 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 363 bp overlap
GFI1B 1 dataset
ChIP K-562 ENCSR509GDT.GFI1B.K-562 111 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 240 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 290 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 204 bp overlap
Gata3 2 datasets
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
JUN 7 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 324 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 443 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 350 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 382 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 521 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 534 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 401 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000EBZ.JUND.WA01 181 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 158 bp overlap
MAFF 1 dataset
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 277 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 261 bp overlap
MEIS2 2 datasets
ChIP K-562 ENCSR851BNE.MEIS2.K-562 425 bp overlap
ChIP K562 ENCFF320GSD 298 bp overlap
MYCN 1 dataset
ChIP RH4 GSE83726.MYCN.RH4 222 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 257 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 319 bp overlap
Mafb 1 dataset
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 247 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 193 bp overlap
NR2F1 1 dataset
ChIP GM12878 ENCSR514VYD.NR2F1.GM12878 348 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 331 bp overlap
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 170 bp overlap
NSD2 1 dataset
ChIP K-562 ENCSR000AVE.NSD2.K-562 261 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 268 bp overlap
PBX2 2 datasets
ChIP K-562 ENCSR263DFP.PBX2.K-562 425 bp overlap
ChIP K562 ENCFF286KMN 226 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 252 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 150 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 265 bp overlap
PKNOX1 3 datasets
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 219 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 481 bp overlap
ChIP K562 ENCFF236IUS 329 bp overlap
PLAG1 2 datasets
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap
PRDM1 1 dataset
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
RAD21 1 dataset
ChIP SLK_CTCF-KD GSE138105.RAD21.SLK_CTCF-KD 515 bp overlap
RBPJ 2 datasets
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 222 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 207 bp overlap
REST 1 dataset
ChIP hippocampus GSE144226.REST.hippocampus 233 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 243 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 163 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 703 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 315 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 430 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 546 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 427 bp overlap
SMAD3 2 datasets
Motif DE_36h DE_36h-SMAD3_MA0795.1 10 bp overlap
Motif DE_48h DE_48h-SMAD3_MA0795.1 10 bp overlap
SMAD5 2 datasets
Motif DE_36h DE_36h-SMAD5_MA1557.1 10 bp overlap
Motif DE_48h DE_48h-SMAD5_MA1557.1 10 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SPIB 1 dataset
Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_36h DE_36h-Spi1_MA0080.7 13 bp overlap
Stat4 1 dataset
Motif DE_36h DE_36h-Stat4_MA0518.2 10 bp overlap
TEAD4 1 dataset
ChIP SNU-216 GSE44416.TEAD4.SNU-216 225 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 218 bp overlap
TFAP2C 3 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 783 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 600 bp overlap
ChIP WA09 GSE105081.TFAP2C.WA09 194 bp overlap
TFAP4 1 dataset
ChIP K562 ENCFF727PXG 545 bp overlap
TFAP4::FLI1 2 datasets
Motif DE_36h DE_36h-TFAP4FLI1_MA1967.2 14 bp overlap
Motif DE_48h DE_48h-TFAP4FLI1_MA1967.2 14 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 190 bp overlap
TRPS1 2 datasets
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
TSC22D4 1 dataset
ChIP GM12878 GSE97661.TSC22D4.GM12878 183 bp overlap
VDR 2 datasets
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 156 bp overlap
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 177 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZFX 1 dataset
ChIP MCF-7 ENCFF009NAJ 497 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 485 bp overlap
ZKSCAN3 2 datasets
Motif DE_36h DE_36h-ZKSCAN3_MA1973.2 14 bp overlap
Motif DE_48h DE_48h-ZKSCAN3_MA1973.2 14 bp overlap
ZNF140 1 dataset
Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap
ZNF184 1 dataset
Motif DE_36h DE_36h-ZNF184_MA2120.1 13 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 499 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 340 bp overlap
ZNF263 1 dataset
Motif DE_36h DE_36h-ZNF263_MA0528.3 7 bp overlap
ZNF341 2 datasets
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
ZNF692 1 dataset
Motif DE_36h DE_36h-ZNF692_MA1986.2 8 bp overlap
ZNF707 2 datasets
Motif DE_36h DE_36h-ZNF707_MA1715.1 15 bp overlap
Motif DE_48h DE_48h-ZNF707_MA1715.1 15 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 181 bp overlap
Zfp335 2 datasets
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif DE_48h DE_48h-Zfp335_MA2002.2 7 bp overlap