chr2 : 236,743,225 236,743,775
550 bp 73 TFs 0 linked genes
This 550 bp open chromatin element has no linked target genes and is bound by 73 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:236,738,225 – 236,748,775
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
73 transcription factors
Source
Cell type
AR 2 datasets
ChIP prostate GSE56288.AR.prostate 217 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 350 bp overlap
ARNTL 2 datasets
ChIP U2OS GSE130602.ARNTL.U2OS 107 bp overlap
ChIP U2OS_DMSO GSE130506.ARNTL.U2OS_DMSO 107 bp overlap
BRD4 18 datasets
ChIP HCC1395_JQ1 GSE63581.BRD4.HCC1395_JQ1 89 bp overlap
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.BRD4.Hs-352-Sk_PAX3-FOXO1-vector 265 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 117 bp overlap
ChIP LPS141 GSE111253.BRD4.LPS141 332 bp overlap
ChIP MCF-7 GSE55921.BRD4.MCF-7 550 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 550 bp overlap
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 182 bp overlap
ChIP RH4 GSE83726.BRD4.RH4 215 bp overlap
ChIP SUM159PT_100nMtrametinib_1h GSE87418.BRD4.SUM159PT_100nMtrametinib_1h 99 bp overlap
ChIP SUM159PT_100nMtrametinib_4h GSE87418.BRD4.SUM159PT_100nMtrametinib_4h 126 bp overlap
ChIP SUM159PT_100nMtrametinib_8h GSE87418.BRD4.SUM159PT_100nMtrametinib_8h 99 bp overlap
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 136 bp overlap
ChIP SUM159PT_DMSO_24h GSE87418.BRD4.SUM159PT_DMSO_24h 96 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 167 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 159 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 198 bp overlap
ChIP SUM229PE_neg_DMSO_24h GSE87418.BRD4.SUM229PE_neg_DMSO_24h 157 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 281 bp overlap
CDK8 2 datasets
ChIP leiomyoma_PT886 GSE128230.CDK8.leiomyoma_PT886 65 bp overlap
ChIP myometrium_PT916 GSE128230.CDK8.myometrium_PT916 128 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 187 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 295 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 260 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 115 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 62 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 270 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF451CNG 171 bp overlap
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 152 bp overlap
EPAS1 1 dataset
ChIP ccRCC GSE86092.EPAS1.ccRCC 272 bp overlap
ETV1 2 datasets
ChIP COLO-800 GSE80443.ETV1.COLO-800 94 bp overlap
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 68 bp overlap
EZH2 2 datasets
ChIP GM23248 ENCFF506FWX 222 bp overlap
ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 270 bp overlap
FOS 3 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 177 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 85 bp overlap
ChIP myometrium_PT1063 GSE128230.FOS.myometrium_PT1063 60 bp overlap
FOSL2 5 datasets
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 157 bp overlap
ChIP NPC_R1159Q GSE122631.FOSL2.NPC_R1159Q 197 bp overlap
ChIP SK-N-SH ENCFF127ZDW 70 bp overlap
ChIP SK-N-SH ENCSR000BVB.FOSL2.SK-N-SH 58 bp overlap
ChIP hESC GSE69539.FOSL2.hESC 53 bp overlap
FOXA1 1 dataset
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 183 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 393 bp overlap
ChIP DE DE-FOXA2-2 305 bp overlap
GATA2 8 datasets
ChIP ESF GSE108408.GATA2.ESF 255 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 51 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 269 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 217 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 202 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P1 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P1 216 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 226 bp overlap
ChIP primary-endometrial-stromal-cell_Veh_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_Veh_P2 195 bp overlap
GATA3 3 datasets
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 97 bp overlap
ChIP SK-N-SH ENCFF040SSB 103 bp overlap
ChIP SK-N-SH ENCFF040SSB 123 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 344 bp overlap
ChIP DE DE-GATA4-2 471 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 331 bp overlap
ChIP DE DE-GATA6-2 542 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 409 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 310 bp overlap
GPS2 1 dataset
ChIP hMADS_D0_E GSE152517.GPS2.hMADS_D0_E 177 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 262 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 218 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 168 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 143 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 233 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 146 bp overlap
HIF1A 1 dataset
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 185 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 150 bp overlap
HSF1 1 dataset
ChIP NCI-H838 GSE38901.HSF1.NCI-H838 185 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 82 bp overlap
JUN 3 datasets
ChIP 786-O GSE86092.JUN.786-O 132 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 317 bp overlap
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 132 bp overlap
JUND 2 datasets
ChIP SK-N-SH ENCFF551NEQ 139 bp overlap
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 95 bp overlap
KAT7 1 dataset
ChIP OCI-AML-3 GSE133516.KAT7.OCI-AML-3 232 bp overlap
LYL1 1 dataset
ChIP TSU-1621MT GSE60477.LYL1.TSU-1621MT 227 bp overlap
MED1 10 datasets
ChIP RH4 GSE83726.MED1.RH4 471 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 253 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 167 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 168 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 100 bp overlap
ChIP hMSC-TERT4_adipocyte-D3 GSE113253.MED1.hMSC-TERT4_adipocyte-D3 110 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 70 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 187 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 119 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 195 bp overlap
MED12 3 datasets
ChIP leiomyoma_PT848 GSE128230.MED12.leiomyoma_PT848 92 bp overlap
ChIP leiomyoma_PT967 GSE128230.MED12.leiomyoma_PT967 59 bp overlap
ChIP myometrium_PT916 GSE128230.MED12.myometrium_PT916 103 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 162 bp overlap
MYCN 2 datasets
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 85 bp overlap
ChIP SH-EP_MYCNER_plusOHT GSE111905.MYCN.SH-EP_MYCNER_plusOHT 95 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 216 bp overlap
MYOD1 6 datasets
ChIP RD GSE137168.MYOD1.RD 168 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 182 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 224 bp overlap
ChIP SMS-CTR GSE137168.MYOD1.SMS-CTR 289 bp overlap
ChIP myoblast GSE50413.MYOD1.myoblast 114 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 113 bp overlap
MYOG 2 datasets
ChIP RH4 GSE83726.MYOG.RH4 244 bp overlap
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 181 bp overlap
NCOR1 1 dataset
ChIP LS180 GSE39277.NCOR1.LS180 89 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 107 bp overlap
NFE2L2 1 dataset
ChIP BEAS-2B GSE145834.NFE2L2.BEAS-2B 199 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 145 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 136 bp overlap
NR3C1 2 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 86 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 163 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 85 bp overlap
PGR 2 datasets
ChIP myometrium_NP1 GSE137550.PGR.myometrium_NP1 550 bp overlap
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 486 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 233 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 112 bp overlap
POLR2A 4 datasets
ChIP sigmoid colon ENCFF725QFT 192 bp overlap
ChIP sigmoid colon ENCFF725QFT 107 bp overlap
ChIP sigmoid colon ENCFF754JQR 126 bp overlap
ChIP sigmoid colon ENCFF754JQR 86 bp overlap
POU5F1 1 dataset
ChIP SKM-1 GSE93706.POU5F1.SKM-1 150 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 210 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 294 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 333 bp overlap
RELA 24 datasets
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 217 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 91 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 179 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 133 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 155 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 103 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 240 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 140 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 138 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 57 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 76 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 103 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 125 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 232 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 127 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 145 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 74 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 59 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 104 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 126 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 125 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 148 bp overlap
RNF2 2 datasets
ChIP fibroblast GSE139053.RNF2.fibroblast 61 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 287 bp overlap
RUVBL2 2 datasets
ChIP U2OS GSE130602.RUVBL2.U2OS 290 bp overlap
ChIP U2OS_cordycepin GSE130507.RUVBL2.U2OS_cordycepin 272 bp overlap
RXRA 2 datasets
ChIP SK-N-SH ENCFF893DLM 95 bp overlap
ChIP SK-N-SH ENCSR000BVG.RXRA.SK-N-SH 92 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 429 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 420 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 349 bp overlap
SMAD3 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.SMAD3.LX2_CALCIPOTRIOL_TGFB1 168 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 241 bp overlap
SMARCA4 1 dataset
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 342 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 145 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 50 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 403 bp overlap
SS18 3 datasets
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 288 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 100 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 95 bp overlap
SS18-SSX 2 datasets
ChIP fibroblast_23aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_23aa-SSX-Tail 142 bp overlap
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 257 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 298 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 110 bp overlap
TCF21 1 dataset
ChIP HCASMC GSE124011.TCF21.HCASMC 302 bp overlap
TEAD4 2 datasets
ChIP SK-N-SH ENCFF754TJT 150 bp overlap
ChIP SK-N-SH ENCSR000BUQ.TEAD4.SK-N-SH 84 bp overlap
TWIST1 1 dataset
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 80 bp overlap
VDR 1 dataset
ChIP LX2_CALCIPOTRIOL_TGFB1 GSE38103.VDR.LX2_CALCIPOTRIOL_TGFB1 161 bp overlap