chr2 : 118,841,828 118,842,164
336 bp 80 TFs 2 linked genes
This 336 bp open chromatin element is linked to EN1 and LINC01956 and is bound by 80 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
EN1 5.5 kb Proximal Proximity
LINC01956 6.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:118,836,828 – 118,847,164
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
80 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 255 bp overlap
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 301 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 266 bp overlap
ChIP HepG2 ENCFF358CXO 165 bp overlap
ChIP K-562 ENCSR641BSL.AGO1.K-562 181 bp overlap
ARNT 1 dataset
ChIP MCF-7_aza GSE85352.ARNT.MCF-7_aza 217 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 336 bp overlap
BCOR 1 dataset
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 336 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 292 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 169 bp overlap
BRD2 3 datasets
ChIP SUM149PT_JQ1 GSE131097.BRD2.SUM149PT_JQ1 336 bp overlap
ChIP SUM149PT_R_DMSO GSE131097.BRD2.SUM149PT_R_DMSO 336 bp overlap
ChIP SUM149PT_R_JQ1 GSE131097.BRD2.SUM149PT_R_JQ1 211 bp overlap
BRD4 8 datasets
ChIP 402-91 GSE111253.BRD4.402-91 292 bp overlap
ChIP CLL_patient1_4h_CpG GSE109411.BRD4.CLL_patient1_4h_CpG 61 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 235 bp overlap
ChIP HCC1395 GSE63581.BRD4.HCC1395 336 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 86 bp overlap
ChIP SUM149_DMSO GSE63581.BRD4.SUM149_DMSO 72 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 336 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 335 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 191 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 107 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 152 bp overlap
ChIP H1 ENCFF095JHA 118 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 270 bp overlap
CTBP2 2 datasets
ChIP H1 ENCFF329MAX 336 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 336 bp overlap
CTCF 7 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 62 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 92 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 235 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 194 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 192 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 198 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 129 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 129 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 198 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 280 bp overlap
EP300 1 dataset
ChIP tibial nerve ENCFF346AYA 336 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 172 bp overlap
ESR1 2 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 215 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 230 bp overlap
EZH2 23 datasets
ChIP GM23338 ENCFF613YON 336 bp overlap
ChIP GM23338 ENCFF886DXX 336 bp overlap
ChIP H1 ENCFF232NZA 336 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 336 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 314 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 336 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 336 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 327 bp overlap
ChIP SK-N-SH ENCFF657FZK 292 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 336 bp overlap
ChIP astrocyte ENCFF365JTP 332 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 336 bp overlap
ChIP fibroblast of lung ENCFF479BAW 336 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 336 bp overlap
ChIP hESC GSE113817.EZH2.hESC 336 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 311 bp overlap
ChIP hepatocyte ENCFF118DKH 85 bp overlap
ChIP hepatocyte ENCFF552DZB 336 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 336 bp overlap
ChIP neural cell ENCFF610EPB 129 bp overlap
ChIP neural cell ENCFF610EPB 336 bp overlap
ChIP neural progenitor cell ENCFF018MKA 336 bp overlap
ChIP neural progenitor cell ENCFF472NFV 336 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 171 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 157 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 336 bp overlap
HNRNPLL 4 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 150 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 133 bp overlap
ChIP HepG2 ENCFF355PIC 336 bp overlap
ChIP HepG2 ENCFF952XAB 336 bp overlap
IRF4 1 dataset
ChIP T-cell GSE136853.IRF4.T-cell 224 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 336 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 336 bp overlap
JUN 2 datasets
ChIP ESC S34-ESC-d0-JUN-exp2 249 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 257 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 301 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 240 bp overlap
KMT2A 1 dataset
ChIP blood_cord GSE83671.KMT2A.blood_cord 191 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 214 bp overlap
MLLT3 1 dataset
ChIP HSPC_MLLT3-virus GSE111482.MLLT3.HSPC_MLLT3-virus 244 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 170 bp overlap
MYB 3 datasets
ChIP U-937_ATRA-treated_MYB GSE98006.MYB.U-937_ATRA-treated_MYB 265 bp overlap
ChIP U-937_vehicle-treated_MYB GSE98006.MYB.U-937_vehicle-treated_MYB 80 bp overlap
ChIP U-937_vehicle-treated_MYB GSE98006.MYB.U-937_vehicle-treated_MYB 183 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 238 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 112 bp overlap
NCOR1 1 dataset
ChIP LS180_125 GSE39277.NCOR1.LS180_125 111 bp overlap
NELFE 1 dataset
ChIP K-562_HS GSE112379.NELFE.K-562_HS 151 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 274 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 336 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 81 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 261 bp overlap
PCGF2 3 datasets
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 336 bp overlap
ChIP fibroblast_MET GSE55605.PCGF2.fibroblast_MET 336 bp overlap
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 336 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 307 bp overlap
POLR2A 12 datasets
ChIP esophagus muscularis mucosa ENCFF432ZCY 336 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 324 bp overlap
ChIP neural cell ENCFF604SPB 270 bp overlap
ChIP sigmoid colon ENCFF725QFT 219 bp overlap
ChIP sigmoid colon ENCFF725QFT 134 bp overlap
ChIP sigmoid colon ENCFF748YVT 253 bp overlap
ChIP sigmoid colon ENCFF754JQR 138 bp overlap
ChIP spleen ENCFF044PYR 173 bp overlap
ChIP spleen ENCFF446ZGT 307 bp overlap
ChIP spleen ENCFF706IUS 336 bp overlap
ChIP transverse colon ENCFF840PXT 252 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 336 bp overlap
POU5F1 3 datasets
ChIP BG03 GSE21614.POU5F1.BG03 162 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 336 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 336 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 312 bp overlap
PRDM15 1 dataset
ChIP WTC11 ENCFF108TMF 274 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 336 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 317 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 316 bp overlap
RBPJ 2 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 335 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 256 bp overlap
RELA 1 dataset
ChIP HEK293_60_min GSE89017.RELA.HEK293_60_min 83 bp overlap
RNF2 4 datasets
ChIP GM12878 ENCSR679FAB.RNF2.GM12878 302 bp overlap
ChIP H1 ENCFF239FFS 336 bp overlap
ChIP HMELBRAF_OVER GSE51929.RNF2.HMELBRAF_OVER 88 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 234 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 316 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 287 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 126 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 215 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 323 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 293 bp overlap
SMARCA4 3 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 264 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 264 bp overlap
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 336 bp overlap
SMARCC1 3 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 335 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 336 bp overlap
ChIP SYO-1 GSE108025.SMARCC1.SYO-1 336 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 183 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 242 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 239 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 274 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 316 bp overlap
SUZ12 9 datasets
ChIP GM12878 ENCFF498QAM 232 bp overlap
ChIP GM12878 ENCSR744XTG.SUZ12.GM12878 336 bp overlap
ChIP H1 ENCFF507HGF 267 bp overlap
ChIP H1 ENCFF881NFR 336 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 311 bp overlap
ChIP NT2-D1 GSE101538.SUZ12.NT2-D1 314 bp overlap
ChIP NT2/D1 ENCFF574SXS 336 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 336 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 332 bp overlap
TAL1 1 dataset
ChIP ME-1 GSE46044.TAL1.ME-1 189 bp overlap
TCF12 1 dataset
ChIP WA01 ENCSR000BIT.TCF12.WA01 232 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 230 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 64 bp overlap
TEAD1 1 dataset
ChIP H69 GSE62274.TEAD1.H69 151 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 247 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 143 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 163 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 281 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BKU.YY1.K-562 118 bp overlap
ZBTB48 2 datasets
ChIP U2OS GSE96776.ZBTB48.U2OS 336 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 336 bp overlap
ZFX 2 datasets
ChIP DAOY GSE45394.ZFX.DAOY 150 bp overlap
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 336 bp overlap
ZNF3 1 dataset
ChIP K-562 ENCSR195QFV.ZNF3.K-562 180 bp overlap