chr1 : 36,465,219 36,465,457
238 bp 79 TFs 1 linked gene
This 238 bp open chromatin element is linked to MRPS15 and is bound by 79 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MRPS15 835 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:36,460,219 – 36,470,457
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
79 transcription factors
Source
Cell type
ADNP 1 dataset
ChIP K562 ENCFF492SKF 133 bp overlap
ASCL1 1 dataset
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 128 bp overlap
BAP1 2 datasets
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 238 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 238 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 238 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 206 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 146 bp overlap
BRD4 5 datasets
ChIP CLL_patient2_4h_CpG GSE109411.BRD4.CLL_patient2_4h_CpG 213 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 100 bp overlap
ChIP K-562_DMSO GSE120715.BRD4.K-562_DMSO 146 bp overlap
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 238 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 238 bp overlap
CAVIN1 1 dataset
ChIP K562 ENCFF731YBD 203 bp overlap
CTCF 1 dataset
ChIP peripheral-blood-neutrophil_US-1 GSE126755.CTCF.peripheral-blood-neutrophil_US-1 201 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 166 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 100 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 238 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 99 bp overlap
FOXA1 10 datasets
ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 137 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 117 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 145 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 238 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 171 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 117 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 154 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 222 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 177 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 160 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 238 bp overlap
ChIP DE DE-FOXA2-2 238 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 180 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 238 bp overlap
ChIP DE DE-GATA4-2 238 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 238 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 238 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 238 bp overlap
ChIP DE DE-GATA6-2 238 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 238 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 238 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 238 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 238 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 238 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 238 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 207 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 238 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCFF299RSE 108 bp overlap
HDAC8 1 dataset
ChIP K-562 ENCSR835TCD.HDAC8.K-562 176 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 155 bp overlap
IKZF3 2 datasets
ChIP HEK293 ENCFF518OXG 226 bp overlap
ChIP HEK293 ENCSR304AMN.IKZF3.HEK293 238 bp overlap
ILF3 1 dataset
ChIP K-562 GSE103215.ILF3.K-562 216 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 90 bp overlap
KAT7 1 dataset
ChIP HepG2 ENCFF613PTN 238 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 238 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 162 bp overlap
KMT2A 1 dataset
ChIP THP-1 GSE79899.KMT2A.THP-1 94 bp overlap
MAZ 1 dataset
ChIP HEK293 ENCSR290SSQ.MAZ.HEK293 156 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 238 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 238 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 166 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 149 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 230 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 164 bp overlap
NCAPH2 2 datasets
ChIP RMG-I GSE120058.NCAPH2.RMG-I 238 bp overlap
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 238 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 103 bp overlap
ONECUT1 5 datasets
ChIP H9 ERP004206.ONECUT1.H9 232 bp overlap
ChIP Hep-G2 ENCSR956OSX.ONECUT1.Hep-G2 238 bp overlap
ChIP HepG2 ENCFF243FIR 238 bp overlap
ChIP liver ERP002306.ONECUT1.liver 198 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 238 bp overlap
ONECUT2 2 datasets
ChIP AGS_Overexpression GSE113045.ONECUT2.AGS_Overexpression 205 bp overlap
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 116 bp overlap
OSR2 4 datasets
ChIP HEK293 ENCFF875BDB 238 bp overlap
ChIP HEK293 ENCFF875BDB 167 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 238 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 123 bp overlap
PATZ1 1 dataset
ChIP HEK293 ENCSR966ULI.PATZ1.HEK293 183 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 205 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 107 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 197 bp overlap
PKNOX1 2 datasets
ChIP HEK293T ENCFF174WDB 175 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 130 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 141 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 100 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 206 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
PRDM14 2 datasets
ChIP hESC GSE22767.PRDM14.hESC 238 bp overlap
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 238 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 185 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 238 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 131 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 238 bp overlap
RB1 2 datasets
ChIP K562 ENCFF627ZBG 152 bp overlap
ChIP K562 ENCFF627ZBG 124 bp overlap
RELA 1 dataset
ChIP K-562 ENCSR772EEN.RELA.K-562 238 bp overlap
RNF2 3 datasets
ChIP WA01 GSE104690.RNF2.WA01 198 bp overlap
ChIP WA09 GSE105028.RNF2.WA09 238 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 238 bp overlap
SETDB1 2 datasets
ChIP HEK293 ENCSR348AGV.SETDB1.HEK293 147 bp overlap
ChIP U2OS ENCSR000EYD.SETDB1.U2OS 192 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 238 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 143 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 238 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 238 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 212 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 164 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 139 bp overlap
SP7 1 dataset
ChIP HEK293 ENCFF733RBE 238 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 238 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 220 bp overlap
TCF12 1 dataset
ChIP H1 ENCFF203EBH 201 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 220 bp overlap
TCF7L2 3 datasets
ChIP HEK293 ENCFF513JQN 238 bp overlap
ChIP HEK293 ENCFF513JQN 238 bp overlap
ChIP HEK293 ENCSR000EUY.TCF7L2.HEK293 238 bp overlap
TEAD4 1 dataset
ChIP HEK293_siCtrl GSE130135.TEAD4.HEK293_siCtrl 138 bp overlap
TFDP1 1 dataset
ChIP K562 ENCFF794ZXJ 142 bp overlap
TOP1 1 dataset
ChIP LNCaP_DHT GSE63202.TOP1.LNCaP_DHT 63 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 167 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 167 bp overlap
YY1AP1 1 dataset
ChIP HEK293_siCtrl GSE130135.YY1AP1.HEK293_siCtrl 114 bp overlap
ZBTB11 2 datasets
ChIP HEK293 ENCFF262GZJ 114 bp overlap
ChIP HEK293 ENCSR882ZTS.ZBTB11.HEK293 238 bp overlap
ZBTB44 3 datasets
ChIP HEK293 ENCFF560VPN 141 bp overlap
ChIP HEK293 ENCFF560VPN 199 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 238 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 219 bp overlap
ZFP3 1 dataset
ChIP HEK293 ENCFF345CRU 216 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 207 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCFF611ZJI 68 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 123 bp overlap
ZNF335 1 dataset
ChIP HEK293 ENCFF784SLD 238 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 199 bp overlap
ZNF449 2 datasets
ChIP HEK293 ENCFF764ZIC 122 bp overlap
ChIP HEK293 ENCSR738SLS.ZNF449.HEK293 174 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 238 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 110 bp overlap
ZNF580 2 datasets
ChIP HEK293 ENCFF906MQV 219 bp overlap
ChIP HEK293 ENCSR668HOP.ZNF580.HEK293 238 bp overlap
ZNF592 2 datasets
ChIP K-562 ENCSR249BHQ.ZNF592.K-562 238 bp overlap
ChIP K562 ENCFF547OSS 65 bp overlap
ZNF596 2 datasets
ChIP HEK293 ENCFF854MGB 238 bp overlap
ChIP HEK293 ENCSR344SBD.ZNF596.HEK293 233 bp overlap
ZNF843 2 datasets
ChIP HEK293 ENCFF241QRH 112 bp overlap
ChIP HEK293 ENCSR502KPJ.ZNF843.HEK293 238 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 222 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 197 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCFF835SGA 238 bp overlap