chr2 : 97,931,591 97,932,156
565 bp 81 TFs 4 linked genes
This 565 bp open chromatin element is linked to 4 target genes and is bound by 81 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
TMEM131 64.0 kb Distal Multiome
C2orf92 267.7 kb Distal Multiome
ACTR1B 267.9 kb Distal Multiome
COX5B 285.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:97,926,591 – 97,937,156
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 97 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 112 bp overlap
BCL6 3 datasets
ChIP B-cell_GERMINAL_CENTER GSE68349.BCL6.B-cell_GERMINAL_CENTER 343 bp overlap
ChIP B-cell_GERMINAL_CENTER GSE43350.BCL6.B-cell_GERMINAL_CENTER 220 bp overlap
ChIP SU-DHL-4 GSE119038.BCL6.SU-DHL-4 153 bp overlap
BRD3 2 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 143 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 277 bp overlap
BRD4 3 datasets
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 363 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 282 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 138 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 269 bp overlap
ChIP K562 ENCFF673OEZ 122 bp overlap
CDK8 1 dataset
ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 185 bp overlap
CEBPA 1 dataset
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 147 bp overlap
CHD4 1 dataset
ChIP GM12878 ENCSR751CJG.CHD4.GM12878 67 bp overlap
CREBBP 2 datasets
ChIP tonsil_GCBC_p5 GSE89688.CREBBP.tonsil_GCBC_p5 223 bp overlap
ChIP tonsil_GCBc_p4 GSE89688.CREBBP.tonsil_GCBc_p4 241 bp overlap
CTCF 2 datasets
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 294 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 152 bp overlap
DPF2 3 datasets
ChIP GM12878 ENCFF681AJV 91 bp overlap
ChIP GM12878 ENCFF681AJV 298 bp overlap
ChIP GM12878 ENCSR509FWH.DPF2.GM12878 213 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 248 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 324 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 204 bp overlap
ERG 1 dataset
ChIP VCaP GSE49091.ERG.VCaP 121 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 423 bp overlap
ChIP DE DE-FOXA2-2 468 bp overlap
FOXO1 1 dataset
ChIP B-cell_GERMINAL_CENTER GSE68349.FOXO1.B-cell_GERMINAL_CENTER 240 bp overlap
FOXP1 1 dataset
ChIP U2932 ERP010999.FOXP1.U2932 98 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 92 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 248 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 220 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 155 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 179 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 332 bp overlap
GATA2 8 datasets
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 326 bp overlap
ChIP SH-SY5Y ENCFF485YIB 317 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 398 bp overlap
ChIP SK-N-SH ENCFF764OZD 379 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 243 bp overlap
ChIP SKH1 GSE87283.GATA2.SKH1 472 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 436 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 130 bp overlap
GATA3 5 datasets
ChIP Kelly GSE65664.GATA3.Kelly 209 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 213 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 228 bp overlap
ChIP SH-SY5Y ENCFF475HYF 385 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 281 bp overlap
GATA4 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 177 bp overlap
ChIP DE DE-GATA4-1 565 bp overlap
ChIP DE DE-GATA4-2 565 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 500 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 373 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 451 bp overlap
GATA6 12 datasets
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap
ChIP DE DE-GATA6-1 565 bp overlap
ChIP DE DE-GATA6-2 565 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 271 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 465 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 262 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 204 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 210 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 523 bp overlap
ChIP foregut GSE117136.GATA6.foregut 414 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 330 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 291 bp overlap
Gfi1B 1 dataset
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 150 bp overlap
HDAC1 2 datasets
ChIP K-562 ENCSR387UWP.HDAC1.K-562 238 bp overlap
ChIP K562 ENCFF968WBH 446 bp overlap
HMGA2 1 dataset
ChIP WTC11 ENCFF535JLP 137 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 211 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCFF667EJQ 195 bp overlap
KMT2A 2 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 213 bp overlap
ChIP L826 GSE83671.KMT2A.L826 57 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 152 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 134 bp overlap
MAFK 1 dataset
ChIP HepG2 ENCFF743ZOF 231 bp overlap
MEF2B 1 dataset
ChIP tonsil GSE110682.MEF2B.tonsil 447 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCFF615CWQ 74 bp overlap
MTA3 1 dataset
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 184 bp overlap
NBN 1 dataset
ChIP GM12878 ENCFF213ZNN 187 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 226 bp overlap
NFIA 1 dataset
Motif DE_60h DE_60h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 127 bp overlap
NFIX 1 dataset
Motif DE_60h DE_60h-NFIX_MA0671.2 6 bp overlap
NR2C2 1 dataset
Motif DE_60h DE_60h-NR2C2_MA0504.2 14 bp overlap
NR2F1 2 datasets
Motif DE_60h DE_60h-NR2F1_MA1537.2 13 bp overlap
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 153 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 148 bp overlap
Nr2f6 1 dataset
Motif DE_60h DE_60h-Nr2f6_MA0677.2 13 bp overlap
ONECUT2 1 dataset
ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 60 bp overlap
PBX3 1 dataset
Motif DE_60h DE_60h-PBX3_MA1114.2 11 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 339 bp overlap
PKNOX1 1 dataset
Motif DE_60h DE_60h-PKNOX1_MA0782.3 10 bp overlap
POLR2A 1 dataset
ChIP Raji ENCFF613VGX 483 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 126 bp overlap
PPARD 1 dataset
Motif DE_60h DE_60h-PPARD_MA1550.2 14 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 141 bp overlap
RCOR1 3 datasets
ChIP K562 ENCFF216EEJ 272 bp overlap
ChIP SK-N-SH ENCFF518EXB 329 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 146 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 362 bp overlap
RXRB 1 dataset
Motif DE_60h DE_60h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_60h DE_60h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_60h DE_60h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 331 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 327 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
SMARCA4 3 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 218 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 252 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 284 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 260 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 303 bp overlap
SOX6 2 datasets
ChIP K-562 ENCSR788RSW.SOX6.K-562 252 bp overlap
ChIP K562 ENCFF059YCJ 381 bp overlap
SPI1 1 dataset
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 214 bp overlap
SREBF1 1 dataset
Motif DE_60h DE_60h-SREBF1_MA0595.1 10 bp overlap
TAL1 6 datasets
ChIP CD34 GSE52924.TAL1.CD34 93 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 114 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 186 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 144 bp overlap
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 211 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 176 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 215 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 99 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 195 bp overlap
THRB 1 dataset
Motif DE_60h DE_60h-THRB_MA1574.2 13 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 565 bp overlap
ZNF324 1 dataset
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
ZNF416 1 dataset
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF701 1 dataset
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
ZSCAN31 1 dataset
Motif DE_48h DE_48h-ZSCAN31_MA1722.2 18 bp overlap