chr2 : 63,849,590 – 63,849,845
255 bp 81 TFs 2 linked genes
This 255 bp open chromatin element is linked to UGP2 and ENSG00000289943 and is bound by 81 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
UGP2 8.6 kb Proximal Proximity
ENSG00000289943 8.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:63,844,590 – 63,854,845
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
81 transcription factors
Source
Cell type
ARID1A 2 datasets
ChIP 12Z GSE129781.ARID1A.12Z 255 bp overlap
ChIP HAP1 GSE108387.ARID1A.HAP1 255 bp overlap
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 151 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 255 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 115 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 255 bp overlap
ATF4 1 dataset
ChIP Jurkat_ZBTB1-KO_Asp-deprivation GSE145783.ATF4.Jurkat_ZBTB1-KO_Asp-deprivation 75 bp overlap
BCL11A 1 dataset
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 114 bp overlap
BRD4 4 datasets
ChIP DND41_E GSE54379.BRD4.DND41_E 255 bp overlap
ChIP KOPT-K1 GSE54379.BRD4.KOPT-K1 188 bp overlap
ChIP SUM159PT_100nMtrametinib300nMJQ1_24h GSE87418.BRD4.SUM159PT_100nMtrametinib300nMJQ1_24h 255 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 128 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000EBU.CHD1.WA01 255 bp overlap
CHD7 3 datasets
ChIP H1 ENCFF126NLU 255 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 255 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 255 bp overlap
CREB1 2 datasets
ChIP HepG2 ENCFF576ERP 255 bp overlap
ChIP WA01 ENCSR000BSN.CREB1.WA01 133 bp overlap
CREBBP 1 dataset
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 119 bp overlap
CTCF 2 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 180 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 255 bp overlap
DMRTA2 1 dataset
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 123 bp overlap
EP300 2 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 211 bp overlap
ChIP hESC GSE17917.EP300.hESC 152 bp overlap
FOS 1 dataset
ChIP myometrium_PT886 GSE128230.FOS.myometrium_PT886 57 bp overlap
FOSL2 1 dataset
ChIP NPC_K755R-pos GSE122631.FOSL2.NPC_K755R-pos 91 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 255 bp overlap
ChIP DE DE-FOXA2-2 255 bp overlap
Motif ES_0h ES_0h-FOXA2_MA0047.4 8 bp overlap
FOXA3 1 dataset
Motif ES_0h ES_0h-FOXA3_MA1683.2 7 bp overlap
FOXB1 1 dataset
Motif ES_0h ES_0h-FOXB1_MA0845.1 11 bp overlap
FOXD3 1 dataset
Motif ES_0h ES_0h-FOXD3_MA0041.3 14 bp overlap
FOXH1 1 dataset
Motif ES_0h ES_0h-FOXH1_MA0479.2 8 bp overlap
FOXI1 1 dataset
Motif ES_0h ES_0h-FOXI1_MA0042.2 7 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 255 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 255 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 232 bp overlap
ChIP KGN_1512 GSE138496.FOXL2.KGN_1512 250 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 255 bp overlap
FOXP1 2 datasets
Motif ES_0h ES_0h-FOXP1_MA0481.4 7 bp overlap
ChIP H9 GSE31006.FOXP1.H9 238 bp overlap
FOXP4 1 dataset
Motif ES_0h ES_0h-FOXP4_MA2117.1 7 bp overlap
FOXS1 1 dataset
Motif ES_0h ES_0h-FOXS1_MA2118.1 8 bp overlap
Foxj3 1 dataset
Motif ES_0h ES_0h-Foxj3_MA0851.2 9 bp overlap
Foxl2 1 dataset
Motif ES_0h ES_0h-Foxl2_MA1607.2 10 bp overlap
GATA6 1 dataset
ChIP AGS GSE51936.GATA6.AGS 83 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 237 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 202 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 71 bp overlap
MED1 6 datasets
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 255 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 131 bp overlap
ChIP hMSC-TERT4_osteoblast-D1 GSE113253.MED1.hMSC-TERT4_osteoblast-D1 64 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 255 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 238 bp overlap
ChIP hMSC-TERT4_undifferentiated GSE113253.MED1.hMSC-TERT4_undifferentiated 255 bp overlap
NANOG 7 datasets
ChIP GM23338 ENCFF065NZG 174 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 131 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 255 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 255 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 255 bp overlap
ChIP hESC GSE20650.NANOG.hESC 195 bp overlap
ChIP hESC GSE18292.NANOG.hESC 106 bp overlap
NIPBL 1 dataset
ChIP WA09 GSE105028.NIPBL.WA09 93 bp overlap
NR2F2 1 dataset
ChIP liver ENCFF427MRU 108 bp overlap
ONECUT1 1 dataset
ChIP H9 ERP004206.ONECUT1.H9 67 bp overlap
POLR2A 3 datasets
ChIP H1 ENCFF566JSR 255 bp overlap
ChIP H1 ENCFF770YBQ 255 bp overlap
ChIP H1 ENCFF833NJP 193 bp overlap
POU2F1 1 dataset
Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap
POU2F3 1 dataset
Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap
POU5F1 8 datasets
Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap
ChIP GM23338 ENCFF333SNB 194 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 109 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 255 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 65 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 129 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 141 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 255 bp overlap
POU5F1B 1 dataset
Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap
PRDM1 1 dataset
Motif ES_0h ES_0h-PRDM1_MA0508.4 7 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 110 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 196 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 255 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 101 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 115 bp overlap
SIN3A 1 dataset
ChIP WA01 ENCSR000BIS.SIN3A.WA01 143 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 234 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 233 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 189 bp overlap
SMARCA2 3 datasets
ChIP NPC_K755R-siAP GSE122631.SMARCA2.NPC_K755R-siAP 169 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 164 bp overlap
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 255 bp overlap
SMARCA4 12 datasets
ChIP A-549_AG15688 GSE132290.SMARCA4.A-549_AG15688 255 bp overlap
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 255 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 255 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 255 bp overlap
ChIP NPC_K755R-siCT GSE122631.SMARCA4.NPC_K755R-siCT 167 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 255 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 145 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 255 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 64 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 255 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 255 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 255 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 152 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 255 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 255 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 255 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 255 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 97 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 73 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 253 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 255 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 168 bp overlap
SPI1 3 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 83 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 88 bp overlap
ChIP K-562 ENCSR000BGW.SPI1.K-562 62 bp overlap
STAT3 1 dataset
ChIP A139 GSE85579.STAT3.A139 127 bp overlap
TAF1 2 datasets
ChIP H1 ENCFF478SZO 255 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 229 bp overlap
TAF7 2 datasets
ChIP H1 ENCFF061XZZ 254 bp overlap
ChIP WA01 ENCSR000BLU.TAF7.WA01 255 bp overlap
TBP 6 datasets
ChIP H1 ENCFF859IIO 255 bp overlap
ChIP H1 ENCFF859IIO 84 bp overlap
ChIP WA01 ENCSR000ECB.TBP.WA01 224 bp overlap
ChIP hESC GSE122298.TBP.hESC 162 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 181 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 255 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte GSE85628.TBX5.cardiomyocyte 232 bp overlap
ChIP cardiomyocyte_1 GSE85628.TBX5.cardiomyocyte_1 232 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 238 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 213 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 255 bp overlap
TEAD4 9 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 255 bp overlap
ChIP H1 ENCFF778PAX 162 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 106 bp overlap
ChIP PC-9_1DF GSE131687.TEAD4.PC-9_1DF 255 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.TEAD4.PC-9_1DF_DMSO 200 bp overlap
ChIP PC-9_2DF GSE131687.TEAD4.PC-9_2DF 231 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.TEAD4.PC-9_2DF_DMSO 255 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 207 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 198 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 255 bp overlap
TP53 1 dataset
ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 255 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 174 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 228 bp overlap
YY1AP1 4 datasets
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 255 bp overlap
ChIP PC-9_1DF_DMSO GSE131687.YY1AP1.PC-9_1DF_DMSO 188 bp overlap
ChIP PC-9_2DF GSE131687.YY1AP1.PC-9_2DF 219 bp overlap
ChIP PC-9_2DF_DMSO GSE131687.YY1AP1.PC-9_2DF_DMSO 226 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 255 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 255 bp overlap
ZFP64 2 datasets
ChIP HEK293 GSE76494.ZFP64.HEK293 251 bp overlap
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 135 bp overlap
ZNF184 1 dataset
Motif ES_0h ES_0h-ZNF184_MA2120.1 13 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 188 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 94 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 255 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 224 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 232 bp overlap
ZNF660 1 dataset
ChIP HEK293 ENCSR283DOU.ZNF660.HEK293 124 bp overlap
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