chr2 : 63,056,639 63,057,039
400 bp 82 TFs 2 linked genes
This 400 bp open chromatin element is linked to OTX1 and EHBP1-AS1 and is bound by 82 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
OTX1 5.9 kb Proximal Proximity
EHBP1-AS1 8.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:63,051,639 – 63,062,039
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 285 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 275 bp overlap
AGO2 2 datasets
ChIP HepG2 ENCFF252VFI 320 bp overlap
ChIP HepG2 ENCFF773YDL 320 bp overlap
AR 1 dataset
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 143 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 286 bp overlap
BCL11A 1 dataset
ChIP HUDEP-2_BCL11A-ER-V5 GSE103445.BCL11A.HUDEP-2_BCL11A-ER-V5 262 bp overlap
BCOR 4 datasets
ChIP B-cell_GERMINAL_CENTER GSE43350.BCOR.B-cell_GERMINAL_CENTER 303 bp overlap
ChIP WA01_KDM2B_KO GSE104690.BCOR.WA01_KDM2B_KO 400 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 171 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 289 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 242 bp overlap
BRD3 2 datasets
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 279 bp overlap
ChIP THP-1_DMSO-PMA GSE138084.BRD3.THP-1_DMSO-PMA 392 bp overlap
BRD4 13 datasets
ChIP MM1-S_JQ1_50NM GSE42355.BRD4.MM1-S_JQ1_50NM 208 bp overlap
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 208 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 400 bp overlap
ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 225 bp overlap
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 228 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 215 bp overlap
ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 182 bp overlap
ChIP THP-1_DMSO GSE138084.BRD4.THP-1_DMSO 400 bp overlap
ChIP THP-1_iBET GSE138084.BRD4.THP-1_iBET 162 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 400 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 69 bp overlap
ChIP THP-1_iBET-BD2-PMA GSE138084.BRD4.THP-1_iBET-BD2-PMA 242 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 284 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 268 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 202 bp overlap
CBX7 1 dataset
ChIP lymphocyte_DMSO GSE110139.CBX7.lymphocyte_DMSO 279 bp overlap
CBX8 2 datasets
ChIP H1 ENCFF095JHA 239 bp overlap
ChIP H1 ENCFF095JHA 400 bp overlap
CDK8 1 dataset
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 229 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 309 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 400 bp overlap
CTCF 2 datasets
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP MM1-S GSE43743.CTCF.MM1-S 200 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF274GAT 268 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 281 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 400 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 386 bp overlap
EGR1 1 dataset
ChIP H1 ENCFF451BLH 247 bp overlap
ERG 5 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 225 bp overlap
ChIP K-562 GSE23730.ERG.K-562 166 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 180 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 283 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 220 bp overlap
ESR1 9 datasets
ChIP Ishikawa_C1-5 GSE147141.ESR1.Ishikawa_C1-5 268 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 231 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 310 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 263 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 283 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 221 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 285 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 240 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 183 bp overlap
ETS1 4 datasets
ChIP HUVEC-C_4h GSE93030.ETS1.HUVEC-C_4h 173 bp overlap
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 211 bp overlap
ChIP HUVEC-C_VEGF_4H GSE41166.ETS1.HUVEC-C_VEGF_4H 204 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.ETS1.HUVEC-C_VEGF_4h 173 bp overlap
EZH2 18 datasets
ChIP B cell ENCFF803EMO 322 bp overlap
ChIP B cell ENCFF803EMO 290 bp overlap
ChIP GM12878 ENCFF635TDF 77 bp overlap
ChIP GM12878 ENCFF635TDF 277 bp overlap
ChIP GM23248 ENCFF404ZHM 200 bp overlap
ChIP GM23248 ENCFF506FWX 256 bp overlap
ChIP GM23338 ENCFF613YON 400 bp overlap
ChIP GM23338 ENCFF886DXX 138 bp overlap
ChIP H1 ENCFF232NZA 400 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 291 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 350 bp overlap
ChIP RCH-ACV GSE135024.EZH2.RCH-ACV 310 bp overlap
ChIP astrocyte ENCFF365JTP 400 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 400 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 400 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 400 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 338 bp overlap
ChIP neural progenitor cell ENCFF472NFV 394 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 149 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 124 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 236 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 139 bp overlap
HDAC6 1 dataset
ChIP GM12878 ENCSR933EYC.HDAC6.GM12878 255 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 211 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 136 bp overlap
IFNA1 1 dataset
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 201 bp overlap
IRF4 1 dataset
ChIP BC-3 GSE132777.IRF4.BC-3 135 bp overlap
JUND 1 dataset
ChIP WA01 ENCSR000BKP.JUND.WA01 94 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 150 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE83671.KMT2A.MV4-11 325 bp overlap
MAX 2 datasets
ChIP P493-6 GSE36354.MAX.P493-6 239 bp overlap
ChIP P493-6_4HR GSE125863.MAX.P493-6_4HR 131 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 171 bp overlap
MED1 1 dataset
ChIP MOLM-14 GSE65138.MED1.MOLM-14 110 bp overlap
MTA3 2 datasets
ChIP K-562 ENCSR180NCY.MTA3.K-562 150 bp overlap
ChIP K-562 ENCSR914NEI.MTA3.K-562 213 bp overlap
MYC 3 datasets
ChIP P493-6 GSE77061.MYC.P493-6 221 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 222 bp overlap
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
MYCN 1 dataset
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 174 bp overlap
MYOD1 1 dataset
ChIP IMR-90_GM GSE128527.MYOD1.IMR-90_GM 234 bp overlap
NANOG 2 datasets
ChIP WA01 ENCSR000BMT.NANOG.WA01 138 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 222 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 138 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 337 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 306 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 295 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 145 bp overlap
ChIP GM12892 ENCFF635MSF 245 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 213 bp overlap
PCGF2 1 dataset
ChIP NT2-D1 GSE101538.PCGF2.NT2-D1 59 bp overlap
POLR2A 3 datasets
ChIP GM12892 ENCFF506PGQ 375 bp overlap
ChIP spleen ENCFF446ZGT 232 bp overlap
ChIP spleen ENCFF706IUS 263 bp overlap
POLR2G 2 datasets
ChIP K562 ENCFF047BLG 252 bp overlap
ChIP K562 ENCFF648YPL 252 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 350 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 295 bp overlap
PRDM14 1 dataset
ChIP NCCIT GSE71675.PRDM14.NCCIT 226 bp overlap
RAD21 1 dataset
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 199 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 332 bp overlap
RBFOX2 7 datasets
ChIP HepG2 ENCFF554DMZ 308 bp overlap
ChIP HepG2 ENCFF554DMZ 249 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 367 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 349 bp overlap
ChIP K562 ENCFF196WTG 184 bp overlap
ChIP K562 ENCFF196WTG 343 bp overlap
ChIP K562 ENCFF967GRF 343 bp overlap
RBM22 2 datasets
ChIP K-562 GSE120104.RBM22.K-562 278 bp overlap
ChIP K-562 ENCSR848AOP.RBM22.K-562 260 bp overlap
RBM39 2 datasets
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 188 bp overlap
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 188 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 366 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 223 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 363 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 313 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 352 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 214 bp overlap
SMARCA4 1 dataset
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 204 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 229 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 317 bp overlap
ChIP ESC S25-ESC-d0-BAF155-exp1 280 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 400 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 381 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 321 bp overlap
SPI1 1 dataset
ChIP ME-1 GSE46044.SPI1.ME-1 278 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 297 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 306 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 240 bp overlap
ChIP Aska-SS_BAF47KO1 GSE108025.SS18.Aska-SS_BAF47KO1 164 bp overlap
SUZ12 8 datasets
ChIP GM12878 ENCFF498QAM 304 bp overlap
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 400 bp overlap
ChIP H1 ENCFF507HGF 271 bp overlap
ChIP H1 ENCFF881NFR 400 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 385 bp overlap
ChIP NT2/D1 ENCFF574SXS 217 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 400 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 376 bp overlap
TAF15 2 datasets
ChIP Hep-G2 ENCSR825MZS.TAF15.Hep-G2 195 bp overlap
ChIP Hep-G2 GSE120104.TAF15.Hep-G2 198 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 223 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 188 bp overlap
TCF7L2 1 dataset
ChIP CD34_PROG_BIO GSE29194.TCF7L2.CD34_PROG_BIO 223 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 187 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 193 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 231 bp overlap
ZBTB33 1 dataset
ChIP K562 ENCFF427SDV 350 bp overlap
ZNF519 1 dataset
ChIP HEK293T GSE78099.ZNF519.HEK293T 193 bp overlap