chrX : 118,353,064 118,353,531
467 bp 85 TFs 1 linked gene
This 467 bp open chromatin element is linked to WDR44 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
WDR44 7.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:118,348,064 – 118,358,531
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 216 bp overlap
ATF3 1 dataset
ChIP K-562 ENCSR028UIU.ATF3.K-562 144 bp overlap
ATF7 1 dataset
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 304 bp overlap
BATF 1 dataset
ChIP GM12878 ENCFF954REE 231 bp overlap
BATF3 1 dataset
ChIP GM12878 GSE97661.BATF3.GM12878 139 bp overlap
BCL11A 2 datasets
ChIP GM12878 ENCFF717YPR 258 bp overlap
ChIP GM12878 ENCSR000BHA.BCL11A.GM12878 124 bp overlap
BMI1 2 datasets
ChIP GM12878 ENCSR469WII.BMI1.GM12878 436 bp overlap
ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 343 bp overlap
BRCA1 1 dataset
ChIP K-562 ENCSR223MLH.BRCA1.K-562 440 bp overlap
BRD2 1 dataset
ChIP K-562 GSE140325.BRD2.K-562 243 bp overlap
BRD3 2 datasets
ChIP K-562 GSE140325.BRD3.K-562 148 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD3.K-562_dilution-6-100 169 bp overlap
BRD4 2 datasets
ChIP K-562 GSE140325.BRD4.K-562 204 bp overlap
ChIP K-562_dilution-6-100 GSE140325.BRD4.K-562_dilution-6-100 323 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 249 bp overlap
ChIP K562 ENCFF673OEZ 296 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 132 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 234 bp overlap
COMMD3-BMI1,BMI1 2 datasets
ChIP GM12878 ENCFF249AMT 341 bp overlap
ChIP MCF-7 ENCFF570JPP 368 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCSR000BUF.CREB1.GM12878 346 bp overlap
CREM 2 datasets
ChIP GM12878 ENCFF391UGE 335 bp overlap
ChIP GM12878 ENCSR839XZU.CREM.GM12878 253 bp overlap
CSDE1 1 dataset
ChIP K562 ENCFF313FYC 377 bp overlap
EBF1 1 dataset
ChIP GM12878 ENCFF167CZS 305 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 305 bp overlap
EP300 4 datasets
ChIP GM12878 ENCFF039QRE 318 bp overlap
ChIP GM12878 ENCFF242HCG 361 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 324 bp overlap
ChIP neural cell ENCFF442QNK 136 bp overlap
ETV6 1 dataset
ChIP GM12878 GSE97661.ETV6.GM12878 204 bp overlap
FOS 1 dataset
Motif DE_60h DE_60h-FOS_MA0476.2 8 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 467 bp overlap
ChIP DE DE-FOXA2-2 467 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 136 bp overlap
FOXJ2 1 dataset
ChIP K562 ENCFF457GZC 452 bp overlap
FOXM1 2 datasets
ChIP GM12878 ENCFF264DJE 467 bp overlap
ChIP GM12878 ENCSR000BRU.FOXM1.GM12878 322 bp overlap
GATA1 4 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 167 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP erythroblast ENCFF867JAR 431 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 366 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 288 bp overlap
ChIP DE DE-GATA4-2 467 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 250 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 322 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 311 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 467 bp overlap
ChIP DE DE-GATA6-2 467 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 328 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 324 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 460 bp overlap
HDAC1 1 dataset
ChIP K-562_dilution-6-100 GSE140325.HDAC1.K-562_dilution-6-100 235 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 236 bp overlap
HMBOX1 4 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 207 bp overlap
ChIP K562 ENCFF055GAZ 378 bp overlap
ChIP K562 ENCFF055GAZ 350 bp overlap
ChIP K562 ENCFF317JJX 373 bp overlap
IKZF1 2 datasets
ChIP GM12878 ENCFF753XDO 295 bp overlap
ChIP GM12878 ENCFF824TGK 467 bp overlap
IKZF2 4 datasets
ChIP GM12878 ENCFF238LYK 457 bp overlap
ChIP GM12878 ENCFF918AID 446 bp overlap
ChIP GM12878 ENCSR822AHX.IKZF2.GM12878 284 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 286 bp overlap
IRF4 1 dataset
ChIP B-cell GSE142493.IRF4.B-cell 246 bp overlap
JUN 1 dataset
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 135 bp overlap
JUNB 2 datasets
ChIP GM12878 ENCFF667EJQ 348 bp overlap
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 375 bp overlap
Jun 1 dataset
Motif DE_60h DE_60h-Jun_MA0489.3 8 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 184 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 179 bp overlap
LIN54 1 dataset
Motif DE_60h DE_60h-LIN54_MA0619.2 7 bp overlap
MEIS1 1 dataset
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_60h DE_60h-MEIS3_MA0775.2 7 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 407 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 379 bp overlap
MTA3 2 datasets
ChIP GM12878 ENCFF681QPL 422 bp overlap
ChIP GM12878 ENCSR000BRH.MTA3.GM12878 192 bp overlap
MXI1 1 dataset
ChIP neural cell ENCFF623HQN 454 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 213 bp overlap
NFIC 2 datasets
ChIP GM12878 ENCFF259FWL 437 bp overlap
ChIP GM12878 ENCSR000BRN.NFIC.GM12878 322 bp overlap
NFKB1 2 datasets
ChIP L1236 GSE63736.NFKB1.L1236 248 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 148 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 301 bp overlap
NIPBL 1 dataset
ChIP LCL GSE38395.NIPBL.LCL 158 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 121 bp overlap
PAX5 1 dataset
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 148 bp overlap
PGR 1 dataset
Motif DE_60h DE_60h-PGR_MA2327.1 9 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 152 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 319 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 192 bp overlap
RELA 4 datasets
ChIP GM12878 ENCSR000EAG.RELA.GM12878 232 bp overlap
ChIP GM12891 ENCSR000EAI.RELA.GM12891 155 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 322 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 176 bp overlap
RELB 4 datasets
ChIP GM12878 ENCFF217ADF 293 bp overlap
ChIP GM12878 ENCFF217ADF 454 bp overlap
ChIP GM12878 ENCSR387QUV.RELB.GM12878 340 bp overlap
ChIP L1236 GSE63736.RELB.L1236 147 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 401 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 467 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 467 bp overlap
ChIP K562 ENCFF421AVO 467 bp overlap
ChIP K562 ENCFF809XVG 441 bp overlap
ChIP MCF-7 ENCFF782EZS 141 bp overlap
ChIP MCF-7 ENCFF973QAD 245 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 380 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 356 bp overlap
SKIL 1 dataset
ChIP GM12878 ENCSR212YKD.SKIL.GM12878 279 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 319 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 467 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 467 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 467 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 271 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 355 bp overlap
SMARCA4 4 datasets
ChIP K-562 ENCSR587OQL.SMARCA4.K-562 153 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 357 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 325 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 274 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 347 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 354 bp overlap
SPI1 3 datasets
ChIP DC_LPS GSE123347.SPI1.DC_LPS 133 bp overlap
ChIP GM12891 ENCFF563IUT 241 bp overlap
ChIP GM12891 ENCSR000BIJ.SPI1.GM12891 184 bp overlap
TAL1 8 datasets
ChIP CD34 GSE52924.TAL1.CD34 126 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 140 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 211 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 164 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 166 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 206 bp overlap
ChIP K562 ENCFF661CCK 230 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 162 bp overlap
TBX21 1 dataset
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 301 bp overlap
TCF12 2 datasets
ChIP K-562 ENCSR744WOO.TCF12.K-562 321 bp overlap
ChIP K562 ENCFF931DJY 320 bp overlap
TP63 3 datasets
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 110 bp overlap
ChIP keratinocyte_D0 GSE59824.TP63.keratinocyte_D0 144 bp overlap
ChIP keratinocyte_D2 GSE59824.TP63.keratinocyte_D2 128 bp overlap
ZBED1 1 dataset
ChIP GM12878 ENCSR207PFI.ZBED1.GM12878 330 bp overlap
ZNF24 2 datasets
ChIP K-562 ENCSR117WTM.ZNF24.K-562 353 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 273 bp overlap