chr22 : 26,837,981 26,838,718
737 bp 128 TFs 3 linked genes
This 737 bp open chromatin element is linked to LINC01422, MIATNB, and TPST2 and is bound by 128 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
LINC01422 20.2 kb Distal Multiome
MIATNB 165.6 kb Distal Multiome
TPST2 248.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr22:26,832,981 – 26,843,718
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
128 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 439 bp overlap
ASCL1 6 datasets
Motif DE_24h DE_24h-ASCL1_MA1631.2 9 bp overlap
Motif DE_36h DE_36h-ASCL1_MA1100.3 8 bp overlap
Motif DE_36h DE_36h-ASCL1_MA1631.2 9 bp overlap
ChIP NCI-H2107 GSE69394.ASCL1.NCI-H2107 157 bp overlap
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 249 bp overlap
ChIP SCLC_ASCLP GSE61197.ASCL1.SCLC_ASCLP 162 bp overlap
ATF2 3 datasets
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 211 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 293 bp overlap
ChIP HepG2 ENCFF955VER 189 bp overlap
Ascl2 1 dataset
Motif DE_36h DE_36h-Ascl2_MA0816.1 10 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 230 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 143 bp overlap
BCOR 1 dataset
ChIP K-562 ENCSR808AKZ.BCOR.K-562 187 bp overlap
BRD4 2 datasets
ChIP MPNST_PDJQ GSE62499.BRD4.MPNST_PDJQ 138 bp overlap
ChIP SUM159PT_100nMtrametinib_72h GSE87418.BRD4.SUM159PT_100nMtrametinib_72h 395 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 186 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX2 2 datasets
Motif DE_36h DE_36h-CDX2_MA0465.3 8 bp overlap
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 210 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
CLOCK 1 dataset
ChIP BA10_2 GSE96659.CLOCK.BA10_2 153 bp overlap
CRY1 2 datasets
ChIP U2OS GSE130602.CRY1.U2OS 288 bp overlap
ChIP U2OS_DMSO GSE130506.CRY1.U2OS_DMSO 288 bp overlap
CTCF 17 datasets
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 223 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 152 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 200 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 158 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 433 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 261 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 154 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 167 bp overlap
ChIP body of pancreas ENCFF881RGF 281 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 142 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 297 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 290 bp overlap
Dux 1 dataset
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
EHF 1 dataset
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_48h DE_48h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_48h DE_48h-ELF4_MA0641.1 12 bp overlap
ELK4 1 dataset
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 412 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siPFKFB3 GSE89786.EP300.pulmonary-artery_endothelial-cell_siPFKFB3 97 bp overlap
ERG 1 dataset
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 328 bp overlap
ETV1 1 dataset
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
ETV6 1 dataset
Motif DE_48h DE_48h-ETV6_MA0645.2 9 bp overlap
ETV7 1 dataset
Motif DE_48h DE_48h-ETV7_MA1708.2 9 bp overlap
EZH2 1 dataset
ChIP A-1847 GSE95643.EZH2.A-1847 234 bp overlap
Elf5 1 dataset
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FIGLA 3 datasets
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 142 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 622 bp overlap
ChIP DE DE-FOXA2-2 449 bp overlap
GABPA 1 dataset
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA1 2 datasets
Motif DE_36h DE_36h-GATA1_MA0035.5 7 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 145 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 720 bp overlap
ChIP DE DE-GATA4-2 737 bp overlap
ChIP foregut GSE117136.GATA4.foregut 299 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 662 bp overlap
ChIP DE DE-GATA6-2 711 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 737 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 725 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 737 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 706 bp overlap
ChIP ESO-26 GSE132680.GATA6.ESO-26 409 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 737 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 708 bp overlap
HIF1A 1 dataset
ChIP U2OS_DMOG GSE85096.HIF1A.U2OS_DMOG 215 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
IKZF1 2 datasets
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
Motif DE_48h DE_48h-IKZF1_MA1508.2 8 bp overlap
IKZF2 1 dataset
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
JUN 8 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 737 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 562 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 737 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 737 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 468 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 332 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 437 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 737 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 271 bp overlap
KDM1A 2 datasets
ChIP H1 ENCFF696SGD 261 bp overlap
ChIP K-562 GSE117944.KDM1A.K-562 126 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 495 bp overlap
KLF9 1 dataset
Motif DE_36h DE_36h-KLF9_MA1107.3 11 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 91 bp overlap
MAFK 2 datasets
ChIP A549 ENCFF371EPR 239 bp overlap
ChIP H1 ENCFF854XWE 194 bp overlap
MEF2A 1 dataset
Motif DE_36h DE_36h-MEF2A_MA0052.5 10 bp overlap
MEF2B 1 dataset
Motif DE_36h DE_36h-MEF2B_MA0660.1 12 bp overlap
MEF2C 1 dataset
Motif DE_36h DE_36h-MEF2C_MA0497.2 11 bp overlap
MEF2D 2 datasets
Motif DE_36h DE_36h-MEF2D_MA0773.1 12 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 214 bp overlap
MYC 1 dataset
ChIP GP5D GSE51234.MYC.GP5D 307 bp overlap
MYOG 1 dataset
Motif DE_36h DE_36h-MYOG_MA0500.3 8 bp overlap
NFE2 3 datasets
ChIP K-562 ENCSR000FCC.NFE2.K-562 152 bp overlap
ChIP K-562 ENCSR552YGL.NFE2.K-562 152 bp overlap
ChIP K562 ENCFF047YKA 238 bp overlap
NHLH1 1 dataset
Motif DE_36h DE_36h-NHLH1_MA0048.3 9 bp overlap
NHLH2 1 dataset
Motif DE_36h DE_36h-NHLH2_MA1529.2 16 bp overlap
NIPBL 1 dataset
ChIP GP5D GSE51234.NIPBL.GP5D 385 bp overlap
Olig2 1 dataset
Motif DE_36h DE_36h-Olig2_MA1997.2 6 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHJ.PAX5.GM12878 151 bp overlap
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 139 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 198 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 575 bp overlap
PLAG1 1 dataset
Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 385 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 462 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
PTBP1 1 dataset
ChIP K-562 GSE120104.PTBP1.K-562 165 bp overlap
Ptf1A 1 dataset
Motif DE_24h DE_24h-Ptf1A_MA1620.2 8 bp overlap
RAD21 3 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 242 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 340 bp overlap
RBM25 3 datasets
ChIP K-562 ENCSR791OZM.RBM25.K-562 202 bp overlap
ChIP K562 ENCFF248CGR 182 bp overlap
ChIP K562 ENCFF957ORK 179 bp overlap
RBPJ 2 datasets
Motif DE_24h DE_24h-RBPJ_MA1116.2 6 bp overlap
Motif DE_36h DE_36h-RBPJ_MA1116.2 6 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 117 bp overlap
RUVBL2 1 dataset
ChIP U2OS_DMSO GSE130507.RUVBL2.U2OS_DMSO 256 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 728 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 737 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 737 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 737 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 737 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 723 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 737 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 737 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 192 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 226 bp overlap
SMARCA4 4 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 179 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 285 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 737 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 243 bp overlap
SMARCC1 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 219 bp overlap
ChIP DE_D1 S10-DE-d1-BAF155-exp1 412 bp overlap
SMC1A 1 dataset
ChIP A-549 GSE76893.SMC1A.A-549 198 bp overlap
SNAI1 1 dataset
Motif DE_24h DE_24h-SNAI1_MA1558.2 7 bp overlap
SNAI2 1 dataset
Motif DE_24h DE_24h-SNAI2_MA0745.3 8 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 215 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 471 bp overlap
SPIB 1 dataset
Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap
Spi1 1 dataset
Motif DE_48h DE_48h-Spi1_MA0080.7 13 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 294 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 262 bp overlap
TAL1 2 datasets
ChIP K-562 GSE107726.TAL1.K-562 261 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
TCF12 2 datasets
Motif DE_24h DE_24h-TCF12_MA1648.2 7 bp overlap
ChIP K-562 ENCSR744WOO.TCF12.K-562 190 bp overlap
TCF3 1 dataset
Motif DE_24h DE_24h-TCF3_MA0522.4 7 bp overlap
TFAP2A 1 dataset
Motif DE_36h DE_36h-TFAP2A_MA0810.2 11 bp overlap
Tcf12 1 dataset
Motif DE_36h DE_36h-Tcf12_MA0521.3 6 bp overlap
Twist2 1 dataset
Motif DE_36h DE_36h-Twist2_MA0633.3 6 bp overlap
XRCC5 4 datasets
ChIP K-562 GSE120104.XRCC5.K-562 270 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 258 bp overlap
ChIP K-562 ENCSR506KWJ.XRCC5.K-562 69 bp overlap
ChIP K-562 GSE120104.XRCC5.K-562 69 bp overlap
ZBTB11 1 dataset
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
ZBTB24 1 dataset
Motif DE_36h DE_36h-ZBTB24_MA2330.1 10 bp overlap
ZBTB7A 1 dataset
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
ZEB1 3 datasets
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZFP69B 1 dataset
ChIP HEK293T GSE78099.ZFP69B.HEK293T 121 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 222 bp overlap
ZMYM3 3 datasets
ChIP K-562 ENCSR102KIN.ZMYM3.K-562 132 bp overlap
ChIP K-562_Ab_JH39-2-2F10 GSE97661.ZMYM3.K-562_Ab_JH39-2-2F10 164 bp overlap
ChIP K562 ENCFF361LXT 208 bp overlap
ZNF140 1 dataset
Motif DE_48h DE_48h-ZNF140_MA1589.2 19 bp overlap
ZNF175 1 dataset
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 258 bp overlap
ZNF549 1 dataset
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
ZNF582 1 dataset
Motif DE_48h DE_48h-ZNF582_MA1983.2 19 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 119 bp overlap
ChIP HepG2 ENCFF490FFQ 179 bp overlap
ZNF768 1 dataset
Motif DE_48h DE_48h-ZNF768_MA1731.2 9 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 82 bp overlap
Zfp809 1 dataset
Motif DE_36h DE_36h-Zfp809_MA2125.1 9 bp overlap