chr20 : 56,004,812 56,005,623
811 bp 72 TFs 1 linked gene
This 811 bp open chromatin element is linked to CBLN4 and is bound by 72 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CBLN4 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:55,999,812 – 56,010,623
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AGO1 4 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 491 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 56 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 360 bp overlap
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 208 bp overlap
AR 3 datasets
ChIP MCF-7 GSE48930.AR.MCF-7 241 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 175 bp overlap
ChIP myofibroblast GSE90772.AR.myofibroblast 304 bp overlap
ARID1B 1 dataset
ChIP MCF-7_shJUN GSE128445.ARID1B.MCF-7_shJUN 811 bp overlap
ARNT 2 datasets
ChIP 501-mel GSE95280.ARNT.501-mel 251 bp overlap
ChIP RCC4 GSE85352.ARNT.RCC4 188 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 175 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 342 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 811 bp overlap
BRD4 10 datasets
ChIP 22Rv1_DHT-DMSO GSE118247.BRD4.22Rv1_DHT-DMSO 300 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 754 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 153 bp overlap
ChIP IMR-90_SENES GSE74238.BRD4.IMR-90_SENES 153 bp overlap
ChIP MCF-10A ERP003925.BRD4.MCF-10A 364 bp overlap
ChIP MCF-7 GSE55921.BRD4.MCF-7 231 bp overlap
ChIP MDA-MB-157 ERP003925.BRD4.MDA-MB-157 775 bp overlap
ChIP T-47D ERP003925.BRD4.T-47D 592 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 179 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 200 bp overlap
CBFB 2 datasets
ChIP ME-1 GSE46044.CBFB.ME-1 282 bp overlap
ChIP ME-1 GSE46044.CBFB.ME-1 247 bp overlap
CBX4 1 dataset
ChIP hMSC GSE117084.CBX4.hMSC 251 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 212 bp overlap
CTCF 5 datasets
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 224 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 461 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 387 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 655 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 288 bp overlap
CTCFL 1 dataset
ChIP delta-47 GSE70764.CTCFL.delta-47 182 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 388 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 233 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 186 bp overlap
EGR1 1 dataset
Motif ES_0h ES_0h-EGR1_MA0162.5 10 bp overlap
EP300 1 dataset
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 477 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 191 bp overlap
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 327 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 413 bp overlap
ESR1 14 datasets
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 58 bp overlap
ChIP MCF-7 GSE148277.ESR1.MCF-7 128 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 315 bp overlap
ChIP MCF-7_D538G GSE148277.ESR1.MCF-7_D538G 217 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 346 bp overlap
ChIP MCF-7_Veh GSE67295.ESR1.MCF-7_Veh 159 bp overlap
ChIP MCF-7_Veh_OA GSE93510.ESR1.MCF-7_Veh_OA 676 bp overlap
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 249 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 569 bp overlap
ChIP MCF-7_estradiol-DHT_45min GSE99626.ESR1.MCF-7_estradiol-DHT_45min 243 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 661 bp overlap
ChIP MCF-7_vehicle_45min_I2 GSE99626.ESR1.MCF-7_vehicle_45min_I2 295 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 355 bp overlap
ChIP U2OS_10nM-E2 GSE151039.ESR1.U2OS_10nM-E2 269 bp overlap
EZH2 12 datasets
ChIP H1 ENCFF232NZA 811 bp overlap
ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 774 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 245 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 349 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 394 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 501 bp overlap
ChIP hESC GSE113817.EZH2.hESC 751 bp overlap
ChIP hESC_KO GSE113817.EZH2.hESC_KO 470 bp overlap
ChIP keratinocyte ENCFF070STK 233 bp overlap
ChIP keratinocyte ENCFF070STK 602 bp overlap
ChIP neural progenitor cell ENCFF472NFV 811 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 349 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 811 bp overlap
ChIP breast-cancer_heregulin-Herceptin-ICI GSE101407.FOXA1.breast-cancer_heregulin-Herceptin-ICI 802 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 200 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 125 bp overlap
GATA6 2 datasets
ChIP PATU8988 GSE47535.GATA6.PATU8988 80 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 193 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 151 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 260 bp overlap
HINFP 1 dataset
Motif DE_12h DE_12h-HINFP_MA0131.3 8 bp overlap
HNRNPLL 2 datasets
ChIP Hep-G2 ENCSR804HMZ.HNRNPLL.Hep-G2 537 bp overlap
ChIP Hep-G2 GSE120104.HNRNPLL.Hep-G2 227 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 798 bp overlap
ChIP EDOMIPS2 GSE48516.JARID2.EDOMIPS2 811 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 197 bp overlap
ChIP WA01 ENCSR000AVC.KDM4A.WA01 811 bp overlap
KDM4C 1 dataset
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 541 bp overlap
KDM5B 4 datasets
ChIP Hep-G2 ENCSR227MRE.KDM5B.Hep-G2 159 bp overlap
ChIP MCF-7 GSE46055.KDM5B.MCF-7 261 bp overlap
ChIP MCF-7 GSE46055.KDM5B.MCF-7 329 bp overlap
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 165 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 180 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 196 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 347 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 106 bp overlap
MTA1 1 dataset
ChIP Hep-G2 ENCSR983KRB.MTA1.Hep-G2 310 bp overlap
MYC 2 datasets
ChIP CD34 GSE85488.MYC.CD34 124 bp overlap
ChIP NB69 GSE138295.MYC.NB69 270 bp overlap
MYCN 1 dataset
ChIP NB-1643 GSE138295.MYCN.NB-1643 578 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 629 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 379 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 236 bp overlap
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 411 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 563 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 435 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 276 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 597 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 192 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 256 bp overlap
POU5F1 7 datasets
ChIP BG03 GSE21614.POU5F1.BG03 111 bp overlap
ChIP BG03 GSE21614.POU5F1.BG03 190 bp overlap
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 302 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 589 bp overlap
ChIP SKM-1 GSE93706.POU5F1.SKM-1 215 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 242 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 488 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 490 bp overlap
RAD21 1 dataset
ChIP neural ENCSR198ZYJ.RAD21.neural 455 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 124 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RBM39 2 datasets
ChIP Hep-G2 GSE120104.RBM39.Hep-G2 135 bp overlap
ChIP Hep-G2 ENCSR339JTP.RBM39.Hep-G2 135 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 288 bp overlap
REST 1 dataset
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 104 bp overlap
RNF2 4 datasets
ChIP H1 ENCFF239FFS 242 bp overlap
ChIP H1 ENCFF239FFS 581 bp overlap
ChIP WA01 ENCSR784VUY.RNF2.WA01 92 bp overlap
ChIP WA01 GSE104690.RNF2.WA01 204 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 811 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 811 bp overlap
RUNX1 2 datasets
ChIP AML GSE111821.RUNX1.AML 211 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 230 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 348 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 336 bp overlap
SREBP2 3 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 302 bp overlap
ChIP HCC70 GSE126380.SREBP2.HCC70 445 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 811 bp overlap
STAT3 2 datasets
ChIP WA01 ERP004237.STAT3.WA01 227 bp overlap
ChIP WA01 ERP004237.STAT3.WA01 369 bp overlap
SUZ12 7 datasets
ChIP H1 ENCFF881NFR 811 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 786 bp overlap
ChIP NT2/D1 ENCFF574SXS 745 bp overlap
ChIP NT2/D1 ENCFF574SXS 242 bp overlap
ChIP NT2/D1 ENCFF574SXS 588 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 144 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 397 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 327 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 377 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 299 bp overlap
TP63 1 dataset
ChIP breast-organoid GSE113909.TP63.breast-organoid 116 bp overlap
TRIM25 2 datasets
ChIP BT-549 GSE79588.TRIM25.BT-549 203 bp overlap
ChIP BT-549 GSE79588.TRIM25.BT-549 360 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 811 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 123 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 811 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 296 bp overlap
ZNF143 1 dataset
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 243 bp overlap