chr17 : 52,160,880 – 52,161,046
166 bp 85 TFs 1 linked gene
This 166 bp open chromatin element is linked to CA10 and is bound by 85 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CA10 2.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:52,155,880 – 52,166,046
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
85 transcription factors
Source
Cell type
AFF1 1 dataset
ChIP SEM_CX4945 GSE90762.AFF1.SEM_CX4945 163 bp overlap
AR 2 datasets
ChIP A-375 GSE116189.AR.A-375 146 bp overlap
ChIP A-375_SLNCR GSE116189.AR.A-375_SLNCR 138 bp overlap
ARID2 3 datasets
ChIP Aska-SS GSE108025.ARID2.Aska-SS 166 bp overlap
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 157 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 166 bp overlap
ARNTL 1 dataset
ChIP Hep-G2 ENCSR794LVK.ARNTL.Hep-G2 125 bp overlap
ATF3 1 dataset
ChIP Hep-G2 ENCSR402ZCY.ATF3.Hep-G2 122 bp overlap
BRD4 2 datasets
ChIP MV4-11_DMSO GSE71776.BRD4.MV4-11_DMSO 166 bp overlap
ChIP MV4-11_IBET GSE71776.BRD4.MV4-11_IBET 166 bp overlap
CBX1 1 dataset
ChIP Hep-G2 ENCSR819WZE.CBX1.Hep-G2 159 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 166 bp overlap
EHMT2 2 datasets
ChIP K-562 ENCSR175EOM.EHMT2.K-562 166 bp overlap
ChIP K562 ENCFF053BWO 115 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF472NFV 141 bp overlap
FEZF2 4 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_24h DE_24h-FEZF2_MA2341.1 8 bp overlap
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
FOS 1 dataset
ChIP leiomyoma_PT848 GSE128230.FOS.leiomyoma_PT848 55 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 166 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 108 bp overlap
IRF4 3 datasets
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 93 bp overlap
ChIP NCI-H929 GSE142493.IRF4.NCI-H929 88 bp overlap
ChIP T-cell GSE136853.IRF4.T-cell 137 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 166 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 1 dataset
ChIP leiomyoma_PT848 GSE128230.JUN.leiomyoma_PT848 55 bp overlap
KLF1 2 datasets
Motif DE_12h DE_12h-KLF1_MA0493.3 8 bp overlap
Motif DE_24h DE_24h-KLF1_MA0493.3 8 bp overlap
KLF10 3 datasets
Motif DE_12h DE_12h-KLF10_MA1511.2 9 bp overlap
Motif DE_24h DE_24h-KLF10_MA1511.2 9 bp overlap
Motif DE_48h DE_48h-KLF10_MA1511.2 9 bp overlap
KLF14 3 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
Motif DE_48h DE_48h-KLF14_MA0740.2 9 bp overlap
KLF2 2 datasets
Motif DE_12h DE_12h-KLF2_MA1515.2 8 bp overlap
Motif DE_24h DE_24h-KLF2_MA1515.2 8 bp overlap
KLF4 2 datasets
Motif DE_12h DE_12h-KLF4_MA0039.5 8 bp overlap
Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap
KLF5 2 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 154 bp overlap
MED1 1 dataset
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 155 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MIER1 2 datasets
ChIP K-562 ENCSR426MDV.MIER1.K-562 166 bp overlap
ChIP K562 ENCFF584AYC 166 bp overlap
MIER2 1 dataset
ChIP HepG2 ENCFF997QIX 166 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 137 bp overlap
MYBL2 1 dataset
ChIP Hep-G2 ENCSR581KCO.MYBL2.Hep-G2 147 bp overlap
NFAT5 1 dataset
ChIP Hep-G2 ENCSR565BVI.NFAT5.Hep-G2 114 bp overlap
NFE2 1 dataset
ChIP erythroid_R3R4 GSE43625.NFE2.erythroid_R3R4 60 bp overlap
NFKBIZ 1 dataset
ChIP Hep-G2 ENCSR235OVI.NFKBIZ.Hep-G2 160 bp overlap
NR1I3 5 datasets
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
Motif DE_24h DE_24h-NR1I3_MA1534.2 8 bp overlap
Motif DE_48h DE_48h-NR1I3_MA1534.2 8 bp overlap
Motif DE_60h DE_60h-NR1I3_MA1534.2 8 bp overlap
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
ONECUT2 1 dataset
ChIP Hep-G2 ENCSR661PKJ.ONECUT2.Hep-G2 115 bp overlap
OSR2 1 dataset
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
PPARG 1 dataset
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 158 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
Pparg::Rxra 5 datasets
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_24h DE_24h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_48h DE_48h-PpargRxra_MA0065.3 13 bp overlap
Motif DE_60h DE_60h-PpargRxra_MA0065.3 13 bp overlap
Motif ES_0h ES_0h-PpargRxra_MA0065.3 13 bp overlap
Prdm5 1 dataset
Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap
RAD21 2 datasets
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 151 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 148 bp overlap
RBBP4 1 dataset
ChIP RH5 GSE155861.RBBP4.RH5 86 bp overlap
RCOR1 1 dataset
ChIP keratinocyte_diff GSE57702.RCOR1.keratinocyte_diff 153 bp overlap
REST 77 datasets
ChIP A-549 ENCSR892DRK.REST.A-549 166 bp overlap
ChIP A-549 ENCSR000BQP.REST.A-549 166 bp overlap
ChIP A549 ENCFF148AIS 166 bp overlap
ChIP A549 ENCFF148AIS 122 bp overlap
ChIP CD4 GSE49570.REST.CD4 166 bp overlap
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Motif DE_24h DE_24h-REST_MA0138.3 20 bp overlap
Motif DE_48h DE_48h-REST_MA0138.3 20 bp overlap
Motif DE_60h DE_60h-REST_MA0138.3 20 bp overlap
Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap
ChIP GM12878 ENCFF235NGC 166 bp overlap
ChIP GM12878 ENCFF943QPB 166 bp overlap
ChIP GM12878 ENCSR000BQS.REST.GM12878 166 bp overlap
ChIP GM12878 ENCSR000BGF.REST.GM12878 166 bp overlap
ChIP GM23338 ENCFF024TCL 166 bp overlap
ChIP GM23338 ENCSR871KYB.REST.GM23338 166 bp overlap
ChIP GP5D GSE51234.REST.GP5D 166 bp overlap
ChIP GP5D_SIRAD21 GSE51234.REST.GP5D_SIRAD21 166 bp overlap
ChIP H1 ENCFF203SWY 166 bp overlap
ChIP H1 ENCFF429RUE 166 bp overlap
ChIP HCT-116 ENCSR000BVI.REST.HCT-116 166 bp overlap
ChIP HCT116 ENCFF929AYY 166 bp overlap
ChIP HEK293 ENCFF073DOT 166 bp overlap
ChIP HEK293 ENCSR896UBV.REST.HEK293 166 bp overlap
ChIP HL-60 ENCFF589LOF 166 bp overlap
ChIP HL-60 ENCSR000BTF.REST.HL-60 166 bp overlap
ChIP HeLa-S3 ENCFF911DTC 166 bp overlap
ChIP HeLa-S3 ENCSR000BMN.REST.HeLa-S3 166 bp overlap
ChIP Hep-G2 ENCSR000BOT.REST.Hep-G2 166 bp overlap
ChIP Hep-G2 ENCSR000BJL.REST.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF122AWR 166 bp overlap
ChIP HepG2 ENCFF800JSL 166 bp overlap
ChIP Ishikawa ENCFF456OHV 166 bp overlap
ChIP Ishikawa ENCSR000BUU.REST.Ishikawa 166 bp overlap
ChIP K-562 ENCSR137ZMQ.REST.K-562 166 bp overlap
ChIP K-562 GSE70482.REST.K-562 166 bp overlap
ChIP K-562 ENCSR000BMW.REST.K-562 166 bp overlap
ChIP K562 ENCFF430APM 166 bp overlap
ChIP K562 ENCFF685YZN 166 bp overlap
ChIP K562 ENCFF685YZN 66 bp overlap
ChIP K562 ENCFF688UKW 166 bp overlap
ChIP K562 ENCFF758CZL 166 bp overlap
ChIP MCF-7 ENCFF893RRD 166 bp overlap
ChIP MCF-7 ENCSR000BSP.REST.MCF-7 166 bp overlap
ChIP NCI-H295R GSE49014.REST.NCI-H295R 166 bp overlap
ChIP NCI-H295R_SF1 GSE49014.REST.NCI-H295R_SF1 166 bp overlap
ChIP PANC-1 ENCSR000BUP.REST.PANC-1 166 bp overlap
ChIP PANC-1 ENCSR000BPK.REST.PANC-1 166 bp overlap
ChIP PANC-1 ENCSR000BJO.REST.PANC-1 166 bp overlap
ChIP PFSK-1 ENCFF668WMP 166 bp overlap
ChIP PFSK-1 ENCFF845VHA 166 bp overlap
ChIP PFSK1 ENCSR000BOX.REST.PFSK1 166 bp overlap
ChIP PFSK1 ENCSR000BJP.REST.PFSK1 166 bp overlap
ChIP Panc1 ENCFF338WSQ 166 bp overlap
ChIP Panc1 ENCFF518EEQ 166 bp overlap
ChIP Panc1 ENCFF629OJO 166 bp overlap
ChIP SK-N-SH ENCFF635KBN 166 bp overlap
ChIP SK-N-SH ENCFF861MKH 166 bp overlap
ChIP SK-N-SH ENCSR000BJJ.REST.SK-N-SH 166 bp overlap
ChIP WA01 ENCSR663WAR.REST.WA01 166 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 166 bp overlap
ChIP colorectal-cancer_CRC121_dissociated GSE112555.REST.colorectal-cancer_CRC121_dissociated 166 bp overlap
ChIP colorectal-cancer_CRC121_intact GSE112555.REST.colorectal-cancer_CRC121_intact 166 bp overlap
ChIP colorectal-cancer_shCTRL_dissociated GSE112555.REST.colorectal-cancer_shCTRL_dissociated 166 bp overlap
ChIP hepatocyte ERP000395.REST.hepatocyte 166 bp overlap
ChIP hiPSC_IA12 GSE106870.REST.hiPSC_IA12 166 bp overlap
ChIP hiPSC_IB12 GSE106870.REST.hiPSC_IB12 166 bp overlap
ChIP hiPSC_IIA11 GSE106870.REST.hiPSC_IIA11 166 bp overlap
ChIP hiPSC_IID12 GSE106870.REST.hiPSC_IID12 166 bp overlap
ChIP hippocampus GSE144226.REST.hippocampus 166 bp overlap
ChIP liver ENCFF240FWT 166 bp overlap
ChIP liver ENCFF577AZT 166 bp overlap
ChIP liver ENCSR867WPH.REST.liver 166 bp overlap
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.REST.metastatic-neuroblastoma_CHLA90 166 bp overlap
ChIP metastatic-neuroblastoma_SKNMM GSE100148.REST.metastatic-neuroblastoma_SKNMM 166 bp overlap
ChIP neural ENCSR000BTV.REST.neural 159 bp overlap
ChIP neural cell ENCFF882LXX 166 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 166 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 166 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 134 bp overlap
SIX1 1 dataset
ChIP Hep-G2 ENCSR561BQM.SIX1.Hep-G2 166 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 166 bp overlap
SMARCA4 8 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 166 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 149 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA4.NPC_K755R-pos 166 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 166 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 140 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 141 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 166 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 166 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 166 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 166 bp overlap
SMARCC1 4 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 150 bp overlap
ChIP Aska-SS_shSSX GSE108025.SMARCC1.Aska-SS_shSSX 166 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 166 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 166 bp overlap
SMC1A 1 dataset
ChIP primary-epidermal-keratinocyte GSE85526.SMC1A.primary-epidermal-keratinocyte 77 bp overlap
SNAI2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 151 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP140L 1 dataset
ChIP Hep-G2 ENCSR107DKT.SP140L.Hep-G2 129 bp overlap
STAT1::STAT2 1 dataset
Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
TEAD1 3 datasets
Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap
Motif DE_24h DE_24h-TEAD1_MA0090.4 9 bp overlap
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 138 bp overlap
TEAD4 4 datasets
ChIP A-549 ENCSR000BUD.TEAD4.A-549 166 bp overlap
ChIP A549 ENCFF243FTL 147 bp overlap
Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap
Motif DE_24h DE_24h-TEAD4_MA0809.3 8 bp overlap
TFAP4::ETV1 1 dataset
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
TFE3 2 datasets
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 166 bp overlap
ChIP HepG2 ENCFF268PFH 166 bp overlap
Vdr 5 datasets
Motif DE_12h DE_12h-Vdr_MA0693.4 7 bp overlap
Motif DE_24h DE_24h-Vdr_MA0693.4 7 bp overlap
Motif DE_48h DE_48h-Vdr_MA0693.4 7 bp overlap
Motif DE_60h DE_60h-Vdr_MA0693.4 7 bp overlap
Motif ES_0h ES_0h-Vdr_MA0693.4 7 bp overlap
ZBED4 1 dataset
ChIP Hep-G2 ENCSR409PMR.ZBED4.Hep-G2 138 bp overlap
ZBTB7B 1 dataset
ChIP Hep-G2 ENCSR322ULL.ZBTB7B.Hep-G2 128 bp overlap
ZFP37 1 dataset
ChIP Hep-G2 ENCSR505LJT.ZFP37.Hep-G2 148 bp overlap
ZNF12 1 dataset
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 113 bp overlap
ZNF142 1 dataset
ChIP Hep-G2 ENCSR512ECF.ZNF142.Hep-G2 149 bp overlap
ZNF143 2 datasets
ChIP Hep-G2 ENCSR101FJT.ZNF143.Hep-G2 147 bp overlap
ChIP WA01 ENCSR000EBW.ZNF143.WA01 166 bp overlap
ZNF217 1 dataset
ChIP Hep-G2 ENCSR055FQB.ZNF217.Hep-G2 157 bp overlap
ZNF232 1 dataset
ChIP Hep-G2 ENCSR837GLU.ZNF232.Hep-G2 138 bp overlap
ZNF257 1 dataset
Motif DE_12h DE_12h-ZNF257_MA1710.2 10 bp overlap
ZNF263 1 dataset
ChIP Hep-G2 ENCSR313MMD.ZNF263.Hep-G2 125 bp overlap
ZNF264 1 dataset
ChIP Hep-G2 ENCSR248BVU.ZNF264.Hep-G2 157 bp overlap
ZNF324 5 datasets
Motif DE_12h DE_12h-ZNF324_MA1977.2 14 bp overlap
Motif DE_24h DE_24h-ZNF324_MA1977.2 14 bp overlap
Motif DE_48h DE_48h-ZNF324_MA1977.2 14 bp overlap
Motif DE_60h DE_60h-ZNF324_MA1977.2 14 bp overlap
Motif ES_0h ES_0h-ZNF324_MA1977.2 14 bp overlap
ZNF366 1 dataset
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 156 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF652 1 dataset
ChIP Hep-G2 ENCSR502GAX.ZNF652.Hep-G2 127 bp overlap
ZNF697 1 dataset
ChIP Hep-G2 ENCSR734WFB.ZNF697.Hep-G2 119 bp overlap
ZNF740 3 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_24h DE_24h-ZNF740_MA0753.3 10 bp overlap
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
ZNF766 1 dataset
ChIP Hep-G2 ENCSR869RSW.ZNF766.Hep-G2 138 bp overlap
ZNF784 5 datasets
Motif DE_12h DE_12h-ZNF784_MA1717.2 8 bp overlap
Motif DE_24h DE_24h-ZNF784_MA1717.2 8 bp overlap
Motif DE_48h DE_48h-ZNF784_MA1717.2 8 bp overlap
Motif DE_60h DE_60h-ZNF784_MA1717.2 8 bp overlap
Motif ES_0h ES_0h-ZNF784_MA1717.2 8 bp overlap
ZNF800 1 dataset
ChIP Hep-G2 ENCSR701WPG.ZNF800.Hep-G2 152 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif DE_24h DE_24h-ZNF85_MA1720.2 12 bp overlap
ZSCAN9 1 dataset
ChIP HepG2 ENCFF196RWJ 166 bp overlap
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