chr13 : 112,055,519 112,055,878
359 bp 72 TFs 0 linked genes
This 359 bp open chromatin element has no linked target genes and is bound by 72 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:112,050,519 – 112,060,878
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
72 transcription factors
Source
Cell type
AATF 1 dataset
ChIP NALM-6 GSE93626.AATF.NALM-6 175 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 359 bp overlap
BACH1 2 datasets
ChIP H1 ENCFF282VDB 144 bp overlap
ChIP WA01 ENCSR000EBQ.BACH1.WA01 275 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 77 bp overlap
BRD4 2 datasets
ChIP MCF-10A ERP003925.BRD4.MCF-10A 100 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 314 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 223 bp overlap
CDK9 1 dataset
ChIP HCT-116 GSE72622.CDK9.HCT-116 278 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 181 bp overlap
CTBP2 1 dataset
ChIP H1 ENCFF329MAX 359 bp overlap
CTCF 14 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 292 bp overlap
ChIP T-47D_triptolide GSE111923.CTCF.T-47D_triptolide 291 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 206 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 228 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 202 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 271 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 312 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 345 bp overlap
ChIP neural cell ENCFF335ADI 359 bp overlap
ChIP neural progenitor cell ENCFF420RBO 301 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 163 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 196 bp overlap
ChIP spleen ENCFF065CBS 103 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 113 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 359 bp overlap
ERG 1 dataset
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 238 bp overlap
ESR1 1 dataset
ChIP MCF-7_Y537S_DMSO GSE148277.ESR1.MCF-7_Y537S_DMSO 237 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D0 GSE129986.ETS1.cardiomyocyte_D0 359 bp overlap
EZH2 23 datasets
ChIP GM23338 ENCFF613YON 359 bp overlap
ChIP GM23338 ENCFF886DXX 359 bp overlap
ChIP H1 ENCFF232NZA 359 bp overlap
ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 314 bp overlap
ChIP HUVEC-C_VEGF_12h GSE109625.EZH2.HUVEC-C_VEGF_12h 273 bp overlap
ChIP HUVEC-C_VEGF_1h GSE109625.EZH2.HUVEC-C_VEGF_1h 91 bp overlap
ChIP HUVEC-C_VEGF_4h GSE109625.EZH2.HUVEC-C_VEGF_4h 359 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 359 bp overlap
ChIP SK-N-MC ENCFF674XUJ 102 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 64 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 359 bp overlap
ChIP epithelial_mammary ENCSR000ARE.EZH2.epithelial_mammary 344 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 359 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 359 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 245 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 250 bp overlap
ChIP hepatocyte ENCFF552DZB 359 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 85 bp overlap
ChIP mammary epithelial cell ENCFF224GAI 287 bp overlap
ChIP myotube ENCSR000ASZ.EZH2.myotube 122 bp overlap
ChIP neural progenitor cell ENCFF018MKA 359 bp overlap
ChIP neural progenitor cell ENCFF472NFV 359 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 272 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 301 bp overlap
FOXP4 1 dataset
ChIP WTC11 ENCFF708TAF 272 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 148 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 328 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 332 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 359 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 306 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 359 bp overlap
JARID2 2 datasets
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 359 bp overlap
ChIP AMIPS8 GSE48516.JARID2.AMIPS8 359 bp overlap
JUN 2 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 359 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 359 bp overlap
KDM4A 1 dataset
ChIP WA01 ENCSR000AVC.KDM4A.WA01 185 bp overlap
KDM4C 2 datasets
ChIP SW1783 GSE92483.KDM4C.SW1783 250 bp overlap
ChIP SW1783 GSE92483.KDM4C.SW1783 69 bp overlap
KDM6B 1 dataset
ChIP CUTLL1 GSE56694.KDM6B.CUTLL1 196 bp overlap
MXI1 1 dataset
ChIP neural ENCSR934NHU.MXI1.neural 236 bp overlap
MYC 3 datasets
ChIP P493-6_24HR GSE125863.MYC.P493-6_24HR 192 bp overlap
ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 93 bp overlap
ChIP U2OS_Doxy GSE77356.MYC.U2OS_Doxy 78 bp overlap
NANOG 3 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 359 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 207 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 207 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 193 bp overlap
NR2F2 2 datasets
ChIP MCF-7_E2 GSE132432.NR2F2.MCF-7_E2 328 bp overlap
ChIP MCF-7_Veh GSE132432.NR2F2.MCF-7_Veh 306 bp overlap
NRL 1 dataset
ChIP retina_Hu13 GSE137311.NRL.retina_Hu13 244 bp overlap
PHF19 1 dataset
ChIP DU145_SH4 GSE135623.PHF19.DU145_SH4 77 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 293 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 346 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 359 bp overlap
RAD21 3 datasets
ChIP HEK293_siCtrl GSE130135.RAD21.HEK293_siCtrl 265 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 359 bp overlap
ChIP neural cell ENCFF564MOT 194 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 164 bp overlap
REST 2 datasets
ChIP neural ENCSR000BTV.REST.neural 348 bp overlap
ChIP neural cell ENCFF882LXX 236 bp overlap
RNF2 2 datasets
ChIP H1 ENCFF239FFS 359 bp overlap
ChIP HUES-64 GSE104059.RNF2.HUES-64 131 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 197 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 282 bp overlap
SIN3A 2 datasets
ChIP H1 ENCFF042ZSL 279 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 145 bp overlap
SMAD2_3 3 datasets
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 270 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 188 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 56 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 152 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 281 bp overlap
SMARCC1 3 datasets
ChIP ESC S25-ESC-d0-BAF155-exp1 316 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 275 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 261 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 211 bp overlap
SMC3 3 datasets
ChIP neural ENCSR404BPV.SMC3.neural 359 bp overlap
ChIP neural cell ENCFF795YGY 359 bp overlap
ChIP neural cell ENCFF795YGY 286 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 127 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 142 bp overlap
SREBP2 1 dataset
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 359 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_W164A GSE139053.SS18-SSX.fibroblast_W164A 220 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 294 bp overlap
SUZ12 6 datasets
ChIP H1 ENCFF881NFR 359 bp overlap
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 164 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 295 bp overlap
ChIP NT2/D1 ENCFF574SXS 128 bp overlap
ChIP NT2/D1 ENCFF574SXS 169 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 315 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 255 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 126 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 314 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 359 bp overlap
ZBTB43 2 datasets
ChIP WTC11 ENCFF058JUB 359 bp overlap
ChIP WTC11 ENCFF058JUB 66 bp overlap
ZBTB48 1 dataset
ChIP U2OS GSE96776.ZBTB48.U2OS 359 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 194 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 100 bp overlap
ZFHX2 1 dataset
ChIP HEK293 ENCFF167TUA 240 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 268 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 310 bp overlap
ZNF423 1 dataset
ChIP WTC11 ENCFF574PBR 301 bp overlap
ZNF468 1 dataset
ChIP HEK293T GSE78099.ZNF468.HEK293T 157 bp overlap