chr13 : 100,521,272 100,521,532
260 bp 90 TFs 0 linked genes
This 260 bp open chromatin element has no linked target genes and is bound by 90 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:100,516,272 – 100,526,532
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
AFF4 1 dataset
ChIP WTC11 ENCFF556XTF 244 bp overlap
AGO1 2 datasets
ChIP Hep-G2 ENCSR555ZMV.AGO1.Hep-G2 203 bp overlap
ChIP Hep-G2 GSE120104.AGO1.Hep-G2 188 bp overlap
AR 1 dataset
ChIP prostate_fetal-fibroblast GSE90772.AR.prostate_fetal-fibroblast 198 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 260 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 260 bp overlap
ASXL3 2 datasets
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 242 bp overlap
ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 260 bp overlap
Arid3a 2 datasets
Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap
Motif ES_0h ES_0h-Arid3a_MA0151.1 6 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 107 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 215 bp overlap
BCOR 3 datasets
ChIP WA01 GSE104690.BCOR.WA01 162 bp overlap
ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 249 bp overlap
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 260 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 50 bp overlap
BRD4 5 datasets
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 260 bp overlap
ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 260 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 260 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 260 bp overlap
ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 260 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 140 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 242 bp overlap
CDX1 2 datasets
Motif DE_12h DE_12h-CDX1_MA0878.3 10 bp overlap
Motif ES_0h ES_0h-CDX1_MA0878.3 10 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 161 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_5 GSE62428.CHD8.T-47D_ETOH_5 159 bp overlap
CTCF 17 datasets
ChIP A-549 ENCSR000AUE.CTCF.A-549 74 bp overlap
ChIP H9 ENCFF152GTF 127 bp overlap
ChIP chondrocyte ENCFF134ORZ 239 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 168 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 76 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 169 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 260 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 138 bp overlap
ChIP endodermal cell ENCFF471YCZ 228 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 50 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 181 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 104 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 181 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 154 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 90 bp overlap
ChIP nephron ENCFF411ACD 111 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 145 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 260 bp overlap
E2F5 1 dataset
ChIP WTC11 ENCFF449LLF 260 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 170 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 203 bp overlap
EHMT2 1 dataset
ChIP Rh41 GSE118666.EHMT2.Rh41 138 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 149 bp overlap
ChIP ME-1 GSE46044.ERG.ME-1 203 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 227 bp overlap
ESR1 11 datasets
ChIP Ishikawa_C1-12 GSE147141.ESR1.Ishikawa_C1-12 242 bp overlap
ChIP Ishikawa_C2-3 GSE147141.ESR1.Ishikawa_C2-3 260 bp overlap
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 244 bp overlap
ChIP Ishikawa_E2 GSE132426.ESR1.Ishikawa_E2 242 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 260 bp overlap
ChIP Ishikawa_E2_D538G_clone2 GSE132426.ESR1.Ishikawa_E2_D538G_clone2 222 bp overlap
ChIP Ishikawa_E2_clone2 GSE132426.ESR1.Ishikawa_E2_clone2 260 bp overlap
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 199 bp overlap
ChIP Ishikawa_M2-3 GSE147141.ESR1.Ishikawa_M2-3 228 bp overlap
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 260 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 219 bp overlap
FLI1 2 datasets
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 213 bp overlap
ChIP UAE GSE23730.FLI1.UAE 240 bp overlap
FOXO1 1 dataset
ChIP CD34 GSE80773.FOXO1.CD34 201 bp overlap
FOXP1 2 datasets
ChIP H9 GSE31006.FOXP1.H9 157 bp overlap
ChIP WTC11 ENCFF338WGC 260 bp overlap
GABPA 1 dataset
ChIP WA01 ENCSR000BIW.GABPA.WA01 150 bp overlap
HDAC2 1 dataset
ChIP WA01 ENCSR000AVB.HDAC2.WA01 126 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 144 bp overlap
HOXA10 2 datasets
Motif DE_12h DE_12h-HOXA10_MA0899.2 9 bp overlap
Motif ES_0h ES_0h-HOXA10_MA0899.2 9 bp overlap
HOXD9 2 datasets
Motif DE_12h DE_12h-HOXD9_MA0913.3 9 bp overlap
Motif ES_0h ES_0h-HOXD9_MA0913.3 9 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 112 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 134 bp overlap
Isl1 2 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif ES_0h ES_0h-Isl1_MA1608.2 7 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 148 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 137 bp overlap
KDM5B 1 dataset
ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 144 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF5 1 dataset
ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 185 bp overlap
KMT2A 9 datasets
ChIP HEK293T_C-term_C49 GSE90762.KMT2A.HEK293T_C-term_C49 260 bp overlap
ChIP HEK293T_C-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_C-term_shCtrl_TASP1-KO 184 bp overlap
ChIP HEK293T_N-term GSE90762.KMT2A.HEK293T_N-term 260 bp overlap
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 225 bp overlap
ChIP HEK293T_N-term_C49 GSE90762.KMT2A.HEK293T_N-term_C49 260 bp overlap
ChIP HEK293T_N-term_shCtrl_TASP1-KO GSE90762.KMT2A.HEK293T_N-term_shCtrl_TASP1-KO 260 bp overlap
ChIP MOLM-13_CBS79-KO-VP-HOTTIP GSE114981.KMT2A.MOLM-13_CBS79-KO-VP-HOTTIP 105 bp overlap
ChIP RCH-ACV GSE83671.KMT2A.RCH-ACV 260 bp overlap
ChIP RS4-11 GSE38403.KMT2A.RS4-11 202 bp overlap
L3MBTL2 2 datasets
ChIP HEK293T ENCFF482NJV 260 bp overlap
ChIP HEK293T ENCSR862PNL.L3MBTL2.HEK293T 170 bp overlap
Lef1 2 datasets
Motif DE_12h DE_12h-Lef1_MA0768.3 8 bp overlap
Motif ES_0h ES_0h-Lef1_MA0768.3 8 bp overlap
MAX 5 datasets
ChIP H1 ENCFF914VQY 140 bp overlap
ChIP NCI-H128 GSE41105.MAX.NCI-H128 147 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 260 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 260 bp overlap
ChIP WTC11 ENCFF223QFY 260 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 186 bp overlap
MYC 2 datasets
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 260 bp overlap
ChIP P493-6_MST-312 GSE77061.MYC.P493-6_MST-312 108 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 260 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 260 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 193 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 260 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 260 bp overlap
NCAPH2 1 dataset
ChIP HEK293 GSE97540.NCAPH2.HEK293 175 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
OGG1 4 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 260 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 260 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 242 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 260 bp overlap
PARP1 1 dataset
ChIP MCF-10A GSE93038.PARP1.MCF-10A 234 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 74 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF566JSR 260 bp overlap
POU2F1 1 dataset
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 209 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 243 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 125 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 260 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 189 bp overlap
PRDM1 1 dataset
Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap
PROX1 2 datasets
Motif DE_12h DE_12h-PROX1_MA0794.1 12 bp overlap
Motif ES_0h ES_0h-PROX1_MA0794.1 12 bp overlap
Plagl1 1 dataset
Motif DE_12h DE_12h-Plagl1_MA1615.2 8 bp overlap
RELA 1 dataset
ChIP HEK293_30_min GSE89017.RELA.HEK293_30_min 206 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 104 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 233 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 219 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 155 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 217 bp overlap
SIX4 1 dataset
ChIP WTC11 ENCFF891HYW 260 bp overlap
SMAD2 1 dataset
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 201 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 260 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 260 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 241 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 245 bp overlap
SMAD4 1 dataset
ChIP hESC GSE29422.SMAD4.hESC 179 bp overlap
SMARCA4 3 datasets
ChIP NSC GSE125033.SMARCA4.NSC 260 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 260 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 260 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 185 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 255 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 52 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 200 bp overlap
SS18 1 dataset
ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 198 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 211 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 198 bp overlap
TBP 2 datasets
ChIP WA01 ENCSR000ECB.TBP.WA01 230 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 239 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 259 bp overlap
TCF7 1 dataset
ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 210 bp overlap
TFDP1 2 datasets
Motif DE_12h DE_12h-TFDP1_MA1122.2 8 bp overlap
Motif ES_0h ES_0h-TFDP1_MA1122.2 8 bp overlap
TRERF1 1 dataset
ChIP WTC11 ENCFF113BUM 125 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 189 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 158 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 166 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 210 bp overlap
YY1 2 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 150 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 202 bp overlap
ZBTB26 2 datasets
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
Motif ES_0h ES_0h-ZBTB26_MA1579.2 8 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 260 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 154 bp overlap
ZNF695 1 dataset
ChIP HEK293T GSE78099.ZNF695.HEK293T 218 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 260 bp overlap
ZNF770 1 dataset
Motif ES_0h ES_0h-ZNF770_MA2099.1 8 bp overlap
Znf423 1 dataset
Motif DE_12h DE_12h-Znf423_MA0116.1 15 bp overlap