chr13 : 45,749,142 45,749,592
450 bp 87 TFs 0 linked genes
This 450 bp open chromatin element has no linked target genes and is bound by 87 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:45,744,142 – 45,754,592
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
87 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 152 bp overlap
ATF2 1 dataset
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 98 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 154 bp overlap
BRD4 4 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 414 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 317 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 78 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 163 bp overlap
CREBBP 1 dataset
ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 76 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 236 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 266 bp overlap
CTCF 3 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 82 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 157 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 217 bp overlap
EBF1 1 dataset
ChIP ASC GSE54889.EBF1.ASC 61 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
ESR1 2 datasets
ChIP MDA-MB-231_LQ GSE95121.ESR1.MDA-MB-231_LQ 219 bp overlap
ChIP MDA-MB-231_LQ_45min GSE95121.ESR1.MDA-MB-231_LQ_45min 176 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 293 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D9 GSE129986.ETS1.cardiomyocyte_D9 179 bp overlap
ETV1 2 datasets
ChIP GIST-T1 GSE106624.ETV1.GIST-T1 105 bp overlap
ChIP GIST-T1 GSE80443.ETV1.GIST-T1 50 bp overlap
EZH2 4 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 99 bp overlap
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 216 bp overlap
ChIP dermal-fibroblast_Transformed GSE126396.EZH2.dermal-fibroblast_Transformed 214 bp overlap
ChIP hepatocyte ENCFF118DKH 267 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 165 bp overlap
ChIP HEK293 ENCFF528YED 368 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 175 bp overlap
FLI1 1 dataset
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 94 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 322 bp overlap
ChIP DE DE-FOXA2-2 364 bp overlap
GATA3 1 dataset
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 148 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 386 bp overlap
ChIP DE DE-GATA4-2 450 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 259 bp overlap
ChIP foregut GSE117136.GATA4.foregut 450 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 450 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 383 bp overlap
ChIP DE DE-GATA6-2 450 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 344 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 370 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 450 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 428 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 347 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 405 bp overlap
ChIP foregut GSE117136.GATA6.foregut 450 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 259 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 319 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 343 bp overlap
GLI2 1 dataset
ChIP HEK293 ENCFF700EUN 163 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 186 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 211 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 271 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 305 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 450 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 279 bp overlap
INSM2 2 datasets
ChIP HEK293 ENCFF008ZWC 205 bp overlap
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 450 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 155 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 181 bp overlap
KLF10 2 datasets
ChIP HEK293 ENCFF326EGX 171 bp overlap
ChIP HEK293 ENCSR006GAQ.KLF10.HEK293 88 bp overlap
MED1 1 dataset
ChIP RH4 GSE83726.MED1.RH4 211 bp overlap
MED26 1 dataset
ChIP HEK293T GSE121024.MED26.HEK293T 179 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 258 bp overlap
MYOD1 1 dataset
ChIP RH4 GSE83726.MYOD1.RH4 322 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 365 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 290 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 379 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 218 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 259 bp overlap
OSR2 3 datasets
ChIP HEK293 ENCFF875BDB 251 bp overlap
ChIP HEK293 ENCSR324LTM.OSR2.HEK293 450 bp overlap
ChIP HEK293 GSE76494.OSR2.HEK293 183 bp overlap
OTX2 2 datasets
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 103 bp overlap
ChIP retina_pigment GSE60024.OTX2.retina_pigment 201 bp overlap
PHF19 1 dataset
ChIP DU145_CTR GSE135623.PHF19.DU145_CTR 180 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 450 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 151 bp overlap
PRDM4 2 datasets
ChIP HEK293 ENCFF069PHD 240 bp overlap
ChIP HEK293 ENCSR443MVV.PRDM4.HEK293 164 bp overlap
PRDM6 3 datasets
ChIP HEK293 ENCFF283AJL 230 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 243 bp overlap
ChIP HEK293 GSE76494.PRDM6.HEK293 188 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 284 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 323 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 182 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 145 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 199 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 450 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 301 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 250 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 261 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 436 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 351 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 203 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 185 bp overlap
SMARCA2 1 dataset
ChIP SK-N-MC_shEWSFLI1 GSE94275.SMARCA2.SK-N-MC_shEWSFLI1 155 bp overlap
SMARCA4 2 datasets
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 91 bp overlap
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 439 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 327 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 398 bp overlap
SS18 1 dataset
ChIP Aska-SS GSE108025.SS18.Aska-SS 148 bp overlap
SS18-SSX 1 dataset
ChIP fibroblast_78aa-SSX-Tail GSE139053.SS18-SSX.fibroblast_78aa-SSX-Tail 191 bp overlap
STAT3 1 dataset
ChIP T-47D_JC5056 GSE126004.STAT3.T-47D_JC5056 314 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 183 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 183 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 248 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 296 bp overlap
ZBTB1 1 dataset
ChIP HEK293 ENCSR927UJQ.ZBTB1.HEK293 135 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 266 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 142 bp overlap
ZBTB44 2 datasets
ChIP HEK293 ENCFF560VPN 82 bp overlap
ChIP HEK293 ENCSR076STQ.ZBTB44.HEK293 365 bp overlap
ZNF10 1 dataset
ChIP HEK293 ENCSR019WUS.ZNF10.HEK293 220 bp overlap
ZNF121 1 dataset
ChIP HEK293 GSE76494.ZNF121.HEK293 283 bp overlap
ZNF18 2 datasets
ChIP HEK293 ENCFF066NGR 232 bp overlap
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 191 bp overlap
ZNF189 2 datasets
ChIP HEK293 ENCFF638TIB 249 bp overlap
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 352 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 443 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 214 bp overlap
ZNF34 1 dataset
ChIP HEK293 ENCSR727PIC.ZNF34.HEK293 152 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 326 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 450 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 264 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 52 bp overlap
ZNF366 3 datasets
ChIP HEK293 ENCFF799ATK 444 bp overlap
ChIP HEK293 ENCFF799ATK 358 bp overlap
ChIP HEK293 ENCSR106EBH.ZNF366.HEK293 324 bp overlap
ZNF501 1 dataset
ChIP HEK293 ENCFF066RAQ 314 bp overlap
ZNF574 1 dataset
ChIP HEK293 GSE76494.ZNF574.HEK293 145 bp overlap
ZNF596 1 dataset
ChIP HEK293 ENCFF854MGB 126 bp overlap
ZNF600 1 dataset
ChIP HEK293 ENCFF785JSX 142 bp overlap
ZNF76 1 dataset
ChIP HEK293 ENCSR072LQF.ZNF76.HEK293 142 bp overlap
ZSCAN30 1 dataset
ChIP HEK293 ENCFF082YBI 152 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 170 bp overlap