chr12 : 125,861,514 – 125,861,968
454 bp 84 TFs 0 linked genes
This 454 bp open chromatin element has no linked target genes and is bound by 84 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:125,856,514 – 125,866,968
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
84 transcription factors
Source
Cell type
AR 5 datasets
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 454 bp overlap
ChIP MCF-7 GSE48930.AR.MCF-7 229 bp overlap
ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 190 bp overlap
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 200 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 184 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 361 bp overlap
BRD4 5 datasets
ChIP COLO-741 GSE73319.BRD4.COLO-741 225 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 153 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 110 bp overlap
ChIP hESC GSE33281.BRD4.hESC 61 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 454 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 454 bp overlap
CBX1 1 dataset
ChIP K-562 ENCSR948QLZ.CBX1.K-562 183 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 278 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_5 GSE62428.CHD8.T-47D_ETOH_5 255 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 141 bp overlap
CTCF 7 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 454 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 454 bp overlap
ChIP T-47D_NaCl-triptolide GSE111923.CTCF.T-47D_NaCl-triptolide 380 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 243 bp overlap
ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 301 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 273 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 292 bp overlap
E2F3 1 dataset
ChIP K-562 ENCSR036QIR.E2F3.K-562 145 bp overlap
E2F6 8 datasets
ChIP H1 ENCFF785DWK 112 bp overlap
ChIP H1 ENCFF785DWK 451 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 365 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 107 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 149 bp overlap
ChIP K562 ENCFF136LTS 199 bp overlap
ChIP K562 ENCFF136LTS 325 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 450 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 154 bp overlap
ERG 3 datasets
ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 454 bp overlap
ChIP MCF-7 GSE23730.ERG.MCF-7 241 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 285 bp overlap
ESR1 9 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 454 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 188 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 378 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 156 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 254 bp overlap
ChIP T-47D_DMSO GSE148277.ESR1.T-47D_DMSO 140 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 211 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 71 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 171 bp overlap
FLI1 2 datasets
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 170 bp overlap
ChIP UAE_ZINC GSE23730.FLI1.UAE_ZINC 224 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 267 bp overlap
FOXA2 1 dataset
ChIP BJ1-hTERT_FoxHnf1aCoExp GSE90454.FOXA2.BJ1-hTERT_FoxHnf1aCoExp 266 bp overlap
FOXP2 1 dataset
ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 62 bp overlap
GABPA 2 datasets
ChIP K562 ENCFF139LXS 358 bp overlap
ChIP K562 ENCFF139LXS 454 bp overlap
GFI1B 2 datasets
ChIP K-562 GSE117944.GFI1B.K-562 173 bp overlap
ChIP K-562_Wnt GSE117944.GFI1B.K-562_Wnt 203 bp overlap
HCFC1R1 1 dataset
ChIP cartilage GSE100311.HCFC1R1.cartilage 358 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 434 bp overlap
HIF1A 1 dataset
ChIP 501-mel GSE95280.HIF1A.501-mel 157 bp overlap
HNF4A 6 datasets
Motif DE_12h DE_12h-HNF4A_MA1494.2 14 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 347 bp overlap
ChIP liver ENCFF354NRH 251 bp overlap
ChIP liver ENCFF449HPV 307 bp overlap
ChIP liver ENCFF449HPV 105 bp overlap
ChIP liver ERP002306.HNF4A.liver 257 bp overlap
JARID2 1 dataset
ChIP AMIPS6 GSE48516.JARID2.AMIPS6 208 bp overlap
KDM4C 2 datasets
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 173 bp overlap
ChIP KYSE-150 GSE53938.KDM4C.KYSE-150 166 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 406 bp overlap
ChIP K562 ENCFF320EQC 286 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 221 bp overlap
MAX 5 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 331 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 359 bp overlap
ChIP liver ENCFF092GVW 108 bp overlap
ChIP liver ENCFF584QGB 255 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 267 bp overlap
MBD2 1 dataset
ChIP HeLa GSE41006.MBD2.HeLa 145 bp overlap
MED26 1 dataset
ChIP U2OS_SHCTR GSE73742.MED26.U2OS_SHCTR 210 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 249 bp overlap
MGA 2 datasets
ChIP K-562 ENCSR710WLO.MGA.K-562 206 bp overlap
ChIP K562 ENCFF140CEX 338 bp overlap
MYOCD 1 dataset
ChIP A-549 GSE128921.MYOCD.A-549 454 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 99 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 222 bp overlap
NR1H2::RXRA 1 dataset
Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap
NR2C1 2 datasets
ChIP K-562 ENCSR178DEG.NR2C1.K-562 291 bp overlap
ChIP K562 ENCFF568JLK 126 bp overlap
NR2C2 4 datasets
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
ChIP K-562 ENCSR750LYM.NR2C2.K-562 454 bp overlap
ChIP K562 ENCFF750AXF 384 bp overlap
ChIP K562 ENCFF750AXF 365 bp overlap
NR2F1 2 datasets
Motif DE_12h DE_12h-NR2F1_MA0017.3 12 bp overlap
Motif DE_12h DE_12h-NR2F1_MA1537.2 13 bp overlap
NRF1 14 datasets
ChIP H1 ENCFF582PEJ 245 bp overlap
ChIP HCC1954 GSE67867.NRF1.HCC1954 255 bp overlap
ChIP HMEC-1 GSE67867.NRF1.HMEC-1 249 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 454 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 439 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 313 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 301 bp overlap
ChIP K-562_Ab_R157-1-3H1 GSE97661.NRF1.K-562_Ab_R157-1-3H1 252 bp overlap
ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 309 bp overlap
ChIP K562 ENCFF130SGK 324 bp overlap
ChIP K562 ENCFF689EWI 440 bp overlap
ChIP K562 ENCFF791UHF 441 bp overlap
ChIP T-47D_HAEGIN2 GSE59935.NRF1.T-47D_HAEGIN2 374 bp overlap
ChIP WA01 ENCSR000ECC.NRF1.WA01 140 bp overlap
Nr2F6 1 dataset
Motif DE_12h DE_12h-Nr2F6_MA0728.1 15 bp overlap
Nr2f6 1 dataset
Motif DE_12h DE_12h-Nr2f6_MA0677.2 13 bp overlap
Nrf1 1 dataset
Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap
OGG1 5 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 454 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 57 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 299 bp overlap
ChIP HEK293_30_min GSE89017.OGG1.HEK293_30_min 274 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 454 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017014 GSE129039.OLIG2.brain-prefrontal-cortex_2017014 237 bp overlap
PHF8 1 dataset
ChIP K-562 ENCSR000AQH.PHF8.K-562 205 bp overlap
POLR2A 6 datasets
ChIP body of pancreas ENCFF501FEC 305 bp overlap
ChIP body of pancreas ENCFF675RCN 335 bp overlap
ChIP body of pancreas ENCFF675RCN 136 bp overlap
ChIP body of pancreas ENCFF727UBE 319 bp overlap
ChIP esophagus muscularis mucosa ENCFF759BBR 316 bp overlap
ChIP spleen ENCFF446ZGT 349 bp overlap
POU2F1 2 datasets
ChIP T-47D GSE148277.POU2F1.T-47D 309 bp overlap
ChIP T-47D_D538G GSE148277.POU2F1.T-47D_D538G 224 bp overlap
POU5F1 3 datasets
ChIP BJ1-hTERT GSE92491.POU5F1.BJ1-hTERT 147 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 63 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 329 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 352 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
Pparg::Rxra 1 dataset
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RARA 1 dataset
ChIP TSU-1621MT GSE60477.RARA.TSU-1621MT 143 bp overlap
RBFOX2 2 datasets
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 214 bp overlap
ChIP K-562 GSE120104.RBFOX2.K-562 214 bp overlap
REST 2 datasets
ChIP K-562 GSE70482.REST.K-562 344 bp overlap
ChIP liver ENCSR867WPH.REST.liver 94 bp overlap
RORC 2 datasets
ChIP HCC70 GSE126380.RORC.HCC70 454 bp overlap
ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 454 bp overlap
RUNX1 3 datasets
ChIP AML GSE111821.RUNX1.AML 295 bp overlap
ChIP Jurkat GSE85524.RUNX1.Jurkat 246 bp overlap
ChIP epididymis_HEE GSE109061.RUNX1.epididymis_HEE 342 bp overlap
RXR 2 datasets
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 68 bp overlap
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 243 bp overlap
RXRB 1 dataset
Motif DE_12h DE_12h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_12h DE_12h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_12h DE_12h-Rxra_MA0512.2 14 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 310 bp overlap
SIRT6 1 dataset
ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 437 bp overlap
SMARCA4 1 dataset
ChIP MCF-10A GSE74716.SMARCA4.MCF-10A 188 bp overlap
SOX2 1 dataset
ChIP RENVM GSE49404.SOX2.RENVM 230 bp overlap
SP1 3 datasets
ChIP liver ENCFF597LFJ 203 bp overlap
ChIP liver ENCFF769YSM 290 bp overlap
ChIP liver ENCFF769YSM 90 bp overlap
SREBP2 2 datasets
ChIP HCC70 GSE126380.SREBP2.HCC70 454 bp overlap
ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 454 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 454 bp overlap
TAF1 1 dataset
ChIP liver ENCFF610UQP 277 bp overlap
TFDP1 2 datasets
ChIP K562 ENCFF584VSB 354 bp overlap
ChIP K562 ENCFF584VSB 454 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 399 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
TP63 1 dataset
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 124 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 454 bp overlap
TRIM28 2 datasets
ChIP HCT-116 GSE72622.TRIM28.HCT-116 358 bp overlap
ChIP hESC GSE115387.TRIM28.hESC 129 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 454 bp overlap
YY1 3 datasets
ChIP WA01 ENCSR000BKD.YY1.WA01 170 bp overlap
ChIP liver ENCFF400MBC 365 bp overlap
ChIP liver ENCSR994YLZ.YY1.liver 190 bp overlap
ZBTB33 5 datasets
ChIP liver ENCFF542CIC 264 bp overlap
ChIP liver ENCFF592BJA 304 bp overlap
ChIP liver ENCFF592BJA 250 bp overlap
ChIP liver ENCSR516HUP.ZBTB33.liver 370 bp overlap
ChIP liver ENCSR345YWJ.ZBTB33.liver 302 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_CSS GSE123089.ZBTB7A.VCaP_CSS 378 bp overlap
ZFP57 1 dataset
ChIP hESC GSE115387.ZFP57.hESC 79 bp overlap
ZFX 3 datasets
ChIP K-562 ENCSR920ASP.ZFX.K-562 211 bp overlap
ChIP K562 ENCFF169LZT 293 bp overlap
ChIP K562 ENCFF169LZT 454 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap
ZNF639 2 datasets
ChIP K-562 ENCSR949NVY.ZNF639.K-562 251 bp overlap
ChIP K562 ENCFF267NLX 367 bp overlap
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