chr12 : 119,593,696 – 119,593,909
213 bp 78 TFs 1 linked gene
This 213 bp open chromatin element is linked to TMEM233 and is bound by 78 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
TMEM233 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:119,588,696 – 119,598,909
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
78 transcription factors
Source
Cell type
AR 1 dataset
ChIP myofibroblast GSE90772.AR.myofibroblast 213 bp overlap
ARNT 1 dataset
ChIP 501-mel GSE95280.ARNT.501-mel 173 bp overlap
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 213 bp overlap
ChIP H1 ENCFF399KAM 65 bp overlap
ATF3 1 dataset
ChIP primary-dermal-fibroblasts_overexpressed GSE81403.ATF3.primary-dermal-fibroblasts_overexpressed 121 bp overlap
BCL11A 2 datasets
ChIP CD34_Day9_30min GSE104676.BCL11A.CD34_Day9_30min 54 bp overlap
ChIP CD34_Day9_90min GSE104676.BCL11A.CD34_Day9_90min 105 bp overlap
BCOR 1 dataset
ChIP WA01 GSE104690.BCOR.WA01 213 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 82 bp overlap
BRD3 3 datasets
ChIP MV4-11_IBET151_500nM GSE120715.BRD3.MV4-11_IBET151_500nM 120 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 124 bp overlap
ChIP U-87MG_GBM GSE99171.BRD3.U-87MG_GBM 123 bp overlap
BRD4 4 datasets
ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 213 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 213 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 213 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 205 bp overlap
CBFA2T2 1 dataset
ChIP NCCIT GSE71675.CBFA2T2.NCCIT 92 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 202 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 166 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 110 bp overlap
CTBP2 3 datasets
ChIP H1 ENCFF329MAX 213 bp overlap
ChIP H1 ENCFF329MAX 205 bp overlap
ChIP WA01 ENCSR000EUO.CTBP2.WA01 95 bp overlap
CTCF 3 datasets
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 213 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 213 bp overlap
ChIP anterior-temporal-cortex_adult GSE116825.CTCF.anterior-temporal-cortex_adult 213 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
E2F1 1 dataset
ChIP U-87MG_GBM GSE99171.E2F1.U-87MG_GBM 213 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 182 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 99 bp overlap
ELF3 3 datasets
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 213 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 70 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 66 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 120 bp overlap
ERG 1 dataset
ChIP MCF-7 GSE23730.ERG.MCF-7 212 bp overlap
ESR1 6 datasets
ChIP Ishikawa GSE99905.ESR1.Ishikawa 197 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 213 bp overlap
ChIP MCF-7_PaPE-1 GSE93510.ESR1.MCF-7_PaPE-1 54 bp overlap
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 200 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 132 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 161 bp overlap
EZH2 14 datasets
ChIP GM23338 ENCFF613YON 198 bp overlap
ChIP H1 ENCFF232NZA 213 bp overlap
ChIP LNCaP GSE39459.EZH2.LNCaP 196 bp overlap
ChIP LNCaP-abl GSE39459.EZH2.LNCaP-abl 213 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 93 bp overlap
ChIP T98G GSE112240.EZH2.T98G 213 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 90 bp overlap
ChIP keratinocyte ENCFF070STK 148 bp overlap
ChIP neural ENCSR511CUH.EZH2.neural 213 bp overlap
ChIP neural progenitor cell ENCFF018MKA 213 bp overlap
ChIP neural progenitor cell ENCFF472NFV 213 bp overlap
ChIP prostate-cancer_HA GSE107780.EZH2.prostate-cancer_HA 213 bp overlap
ChIP prostate-cancer_plko GSE107780.EZH2.prostate-cancer_plko 180 bp overlap
ChIP prostate-cancer_shEZH2 GSE107780.EZH2.prostate-cancer_shEZH2 213 bp overlap
EZH2_phosphoT487 2 datasets
ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 134 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 95 bp overlap
GATA1 1 dataset
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 55 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 213 bp overlap
GLI3 1 dataset
Motif ES_0h ES_0h-GLI3_MA1491.3 15 bp overlap
GLIS2 1 dataset
ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 199 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 213 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 168 bp overlap
Gli1 1 dataset
Motif ES_0h ES_0h-Gli1_MA1990.2 10 bp overlap
Gli2 1 dataset
Motif ES_0h ES_0h-Gli2_MA0734.4 9 bp overlap
HIF3A 1 dataset
ChIP Hep-3B2-1-7 GSE129491.HIF3A.Hep-3B2-1-7 213 bp overlap
INO80 1 dataset
ChIP Huh-7 GSE97411.INO80.Huh-7 213 bp overlap
JUN 3 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 130 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 186 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 155 bp overlap
KDM4A 2 datasets
ChIP H1 ENCFF078LED 157 bp overlap
ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 100 bp overlap
KLF1 2 datasets
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 213 bp overlap
ChIP HEK293 GSE76494.KLF1.HEK293 157 bp overlap
MAX 3 datasets
ChIP H1 ENCFF914VQY 88 bp overlap
ChIP SK-N-SH ENCFF285LXR 213 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 194 bp overlap
MED1 2 datasets
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 177 bp overlap
ChIP U-87MG GSE36354.MED1.U-87MG 213 bp overlap
MNX1 1 dataset
ChIP Hep-G2 ENCSR108MKR.MNX1.Hep-G2 86 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 187 bp overlap
MYC 1 dataset
ChIP U-87MG GSE36354.MYC.U-87MG 213 bp overlap
MYC-DAXX 1 dataset
ChIP HEK293_GAL4-DBD GSE107348.MYC-DAXX.HEK293_GAL4-DBD 213 bp overlap
NFE2L2 1 dataset
ChIP A-549 GSE113497.NFE2L2.A-549 205 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 176 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 158 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 213 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 213 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 197 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 213 bp overlap
POLR2A 6 datasets
ChIP erythroblast ENCFF498VMR 213 bp overlap
ChIP erythroblast ENCFF498VMR 213 bp overlap
ChIP gastrocnemius medialis ENCFF081DTE 213 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 213 bp overlap
ChIP thyroid gland ENCFF967QCV 213 bp overlap
ChIP thyroid gland ENCFF979LRR 213 bp overlap
POU2F1 1 dataset
ChIP T-47D GSE148277.POU2F1.T-47D 213 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 170 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 169 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 213 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 161 bp overlap
RBBP5 2 datasets
ChIP H1 ENCFF905HFL 109 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 212 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 206 bp overlap
REST 2 datasets
ChIP H1 ENCFF429RUE 147 bp overlap
ChIP WA01 ENCSR000BHM.REST.WA01 99 bp overlap
RNF2 1 dataset
ChIP WA01 GSE104690.RNF2.WA01 213 bp overlap
RREB1 1 dataset
Motif ES_0h ES_0h-RREB1_MA0073.2 19 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE85524.RUNX1.Jurkat 201 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 208 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 134 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 176 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 213 bp overlap
SRSF7 1 dataset
ChIP Hep-G2 GSE120104.SRSF7.Hep-G2 98 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 206 bp overlap
SUZ12 8 datasets
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 213 bp overlap
ChIP H1 ENCFF881NFR 213 bp overlap
ChIP LNCaP GSE39459.SUZ12.LNCaP 120 bp overlap
ChIP NCCIT GSE71675.SUZ12.NCCIT 213 bp overlap
ChIP NT2/D1 ENCFF574SXS 213 bp overlap
ChIP NT2/D1 ENCFF574SXS 213 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 213 bp overlap
ChIP WA01 ENCSR000EUQ.SUZ12.WA01 211 bp overlap
TAF1 1 dataset
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 164 bp overlap
TBP 1 dataset
ChIP WA01 ENCSR000ECB.TBP.WA01 173 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 213 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 213 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 170 bp overlap
TFIIIC 1 dataset
ChIP HEK293 GSE119418.TFIIIC.HEK293 189 bp overlap
TP63 2 datasets
ChIP keratinocyte GSE33571.TP63.keratinocyte 172 bp overlap
ChIP keratinocyte_diff GSE33571.TP63.keratinocyte_diff 94 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 175 bp overlap
TRIM28 1 dataset
ChIP HCT-116 GSE72622.TRIM28.HCT-116 205 bp overlap
WDR5 1 dataset
ChIP SMMC-7721 GSE126982.WDR5.SMMC-7721 213 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 213 bp overlap
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 200 bp overlap
ZNF184 1 dataset
ChIP WTC11 ENCFF352POG 213 bp overlap
ZNF398 2 datasets
ChIP HEK293 ENCFF184XEW 51 bp overlap
ChIP HEK293 ENCSR676ZEF.ZNF398.HEK293 95 bp overlap
ZNF90 1 dataset
ChIP HEK293T GSE78099.ZNF90.HEK293T 106 bp overlap
Huangfu Lab · Publications · Resources · Contact