chr12 : 24,216,067 24,216,563
496 bp 86 TFs 0 linked genes
This 496 bp open chromatin element has no linked target genes and is bound by 86 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:24,211,067 – 24,221,563
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
86 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 136 bp overlap
ATF6 1 dataset
Motif DE_12h DE_12h-ATF6_MA1466.2 13 bp overlap
Ahr::Arnt 4 datasets
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap
BRD4 2 datasets
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 269 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 85 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 249 bp overlap
CREB3 1 dataset
Motif DE_12h DE_12h-CREB3_MA0638.2 12 bp overlap
CREB3L1 1 dataset
Motif DE_12h DE_12h-CREB3L1_MA0839.2 13 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 437 bp overlap
EGR3 2 datasets
Motif DE_12h DE_12h-EGR3_MA0732.2 11 bp overlap
Motif ES_0h ES_0h-EGR3_MA0732.2 11 bp overlap
EP300 2 datasets
ChIP H1 ENCFF927IYK 221 bp overlap
ChIP WA01 ENCSR000BKK.EP300.WA01 144 bp overlap
FEZF2 2 datasets
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 345 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 210 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 309 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 184 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 269 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 377 bp overlap
HOXB4 1 dataset
Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap
HOXC4 1 dataset
Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap
HOXD3 1 dataset
Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap
HOXD4 1 dataset
Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 288 bp overlap
KLF12 2 datasets
Motif DE_12h DE_12h-KLF12_MA0742.2 9 bp overlap
Motif ES_0h ES_0h-KLF12_MA0742.2 9 bp overlap
KLF16 2 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF3 1 dataset
Motif DE_12h DE_12h-KLF3_MA1516.2 10 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 139 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
NANOG 9 datasets
ChIP GM23338 ENCFF065NZG 203 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 140 bp overlap
ChIP H1 ENCFF747ZPQ 200 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 258 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 196 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 167 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 247 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 219 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 191 bp overlap
NR1I2 2 datasets
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
Motif ES_0h ES_0h-NR1I2_MA1533.2 15 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 293 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 300 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif ES_0h ES_0h-PATZ1_MA1961.2 11 bp overlap
PAX3 1 dataset
Motif DE_12h DE_12h-PAX3_MA1546.2 14 bp overlap
PAX5 2 datasets
Motif DE_12h DE_12h-PAX5_MA0014.4 8 bp overlap
Motif ES_0h ES_0h-PAX5_MA0014.4 8 bp overlap
PBX3 1 dataset
Motif DE_12h DE_12h-PBX3_MA1114.2 11 bp overlap
PKNOX1 1 dataset
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
POU1F1 1 dataset
Motif DE_12h DE_12h-POU1F1_MA0784.3 14 bp overlap
POU2F1 1 dataset
Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap
POU2F2 1 dataset
Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap
POU2F3 1 dataset
Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU3F4 1 dataset
Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap
POU4F3 1 dataset
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
POU5F1 14 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 494 bp overlap
ChIP GM23338 ENCFF333SNB 217 bp overlap
ChIP H1 ENCFF698ZAP 177 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 296 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 85 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 332 bp overlap
ChIP WA01 ENCSR000BMU.POU5F1.WA01 150 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 155 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 157 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 142 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 255 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 218 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 161 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 105 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 314 bp overlap
POU6F1 1 dataset
Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap
POU6F2 1 dataset
Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap
RARB 2 datasets
Motif DE_12h DE_12h-RARB_MA1552.2 13 bp overlap
Motif ES_0h ES_0h-RARB_MA1552.2 13 bp overlap
RXRB 4 datasets
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
Motif DE_12h DE_12h-RXRB_MA1555.1 14 bp overlap
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
Motif ES_0h ES_0h-RXRB_MA1555.1 14 bp overlap
RXRG 4 datasets
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Motif DE_12h DE_12h-RXRG_MA1556.1 14 bp overlap
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
Motif ES_0h ES_0h-RXRG_MA1556.1 14 bp overlap
SMARCA4 6 datasets
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 216 bp overlap
ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 86 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 148 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 97 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 169 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 175 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 182 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 141 bp overlap
SOX10 1 dataset
Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap
SOX2 9 datasets
ChIP H9 GSE46837.SOX2.H9 162 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 148 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 137 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 209 bp overlap
ChIP TT GSE46837.SOX2.TT 187 bp overlap
ChIP hESC GSE18292.SOX2.hESC 96 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 220 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 195 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 132 bp overlap
SOX4 1 dataset
Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap
SP1 3 datasets
ChIP H1 ENCFF263FUH 225 bp overlap
ChIP H1 ENCFF263FUH 321 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 168 bp overlap
SP2 2 datasets
Motif DE_12h DE_12h-SP2_MA0516.3 9 bp overlap
Motif ES_0h ES_0h-SP2_MA0516.3 9 bp overlap
SP3 2 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP9 2 datasets
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
Motif ES_0h ES_0h-SP9_MA1564.2 10 bp overlap
SREBF1 2 datasets
Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap
Motif ES_0h ES_0h-SREBF1_MA0595.1 10 bp overlap
SREBF2 4 datasets
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
Motif ES_0h ES_0h-SREBF2_MA0596.1 10 bp overlap
STAT3 1 dataset
Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap
Sox17 1 dataset
Motif DE_12h DE_12h-Sox17_MA0078.3 10 bp overlap
Sox5 1 dataset
Motif DE_12h DE_12h-Sox5_MA0087.3 8 bp overlap
Sox7 1 dataset
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
TEAD1 1 dataset
ChIP WTC11 ENCFF502QUV 253 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 311 bp overlap
ChIP H1 ENCFF778PAX 117 bp overlap
ChIP hESC GSE99202.TEAD4.hESC 131 bp overlap
THRB 2 datasets
Motif DE_12h DE_12h-THRB_MA1576.2 18 bp overlap
Motif ES_0h ES_0h-THRB_MA1576.2 18 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 234 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 74 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB33 2 datasets
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 406 bp overlap
ChIP K562 ENCFF875HLX 360 bp overlap
ZNF148 2 datasets
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
Motif ES_0h ES_0h-ZNF148_MA1653.2 10 bp overlap
ZNF213 1 dataset
Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap
ZNF281 3 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif ES_0h ES_0h-ZNF281_MA1630.3 10 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF460 3 datasets
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap
Motif ES_0h ES_0h-ZNF460_MA1596.1 16 bp overlap
ZNF770 1 dataset
Motif DE_12h DE_12h-ZNF770_MA2099.1 8 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap