chr11 : 113,192,132 113,192,786
654 bp 88 TFs 2 linked genes
This 654 bp open chromatin element is linked to TTC12 and NCAM1 and is bound by 88 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TTC12 122.1 kb Distal Multiome
NCAM1 231.0 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:113,187,132 – 113,197,786
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
88 transcription factors
Source
Cell type
BRD4 5 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 171 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 654 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 654 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 196 bp overlap
ChIP SK-N-BE2-C_Naive-veh GSE107706.BRD4.SK-N-BE2-C_Naive-veh 630 bp overlap
CEBPD 1 dataset
ChIP K-562 ENCSR000BVY.CEBPD.K-562 126 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 361 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 454 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 306 bp overlap
CREBBP 1 dataset
ChIP LS180_125 GSE39277.CREBBP.LS180_125 92 bp overlap
Crx 1 dataset
Motif DE_36h DE_36h-Crx_MA0467.3 6 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 174 bp overlap
EP300 4 datasets
ChIP SK-N-SH ENCFF829RWA 327 bp overlap
ChIP SK-N-SH ENCFF829RWA 143 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 301 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 61 bp overlap
ESR1 1 dataset
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 105 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 451 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 496 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 654 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 451 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 310 bp overlap
FOXA2 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 288 bp overlap
ChIP DE DE-FOXA2-1 493 bp overlap
ChIP DE DE-FOXA2-2 529 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 168 bp overlap
ChIP PANC-1_EV GSE119930.FOXA2.PANC-1_EV 654 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 344 bp overlap
FOXJ3 2 datasets
ChIP SK-N-SH ENCFF124KVL 396 bp overlap
ChIP SK-N-SH ENCFF124KVL 441 bp overlap
GATA1 4 datasets
ChIP K-562 GSE107726.GATA1.K-562 253 bp overlap
ChIP K-562 ENCSR000EFT.GATA1.K-562 119 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 219 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 206 bp overlap
GATA2 6 datasets
ChIP SH-SY5Y ENCFF485YIB 209 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 654 bp overlap
ChIP SK-N-SH ENCFF764OZD 354 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 293 bp overlap
ChIP WA09 GSE105081.GATA2.WA09 150 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 160 bp overlap
GATA3 8 datasets
ChIP BE2C GSE65664.GATA3.BE2C 302 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 247 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 363 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 348 bp overlap
ChIP SH-SY5Y ENCFF475HYF 344 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 285 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 251 bp overlap
ChIP SK-N-SH ENCFF040SSB 245 bp overlap
GATA4 9 datasets
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 192 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 481 bp overlap
ChIP DE DE-GATA4-2 654 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 330 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 202 bp overlap
ChIP foregut GSE117136.GATA4.foregut 486 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 654 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 654 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 520 bp overlap
ChIP DE DE-GATA6-2 644 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 423 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 483 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 430 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 654 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 654 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 461 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 428 bp overlap
ChIP foregut GSE117136.GATA6.foregut 397 bp overlap
ChIP foregut GSE117136.GATA6.foregut 113 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 374 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 402 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 654 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 654 bp overlap
GRHL2 1 dataset
ChIP LNCaP GSE80256.GRHL2.LNCaP 266 bp overlap
GSC 1 dataset
Motif DE_36h DE_36h-GSC_MA0648.2 6 bp overlap
GSC2 1 dataset
Motif DE_36h DE_36h-GSC2_MA0891.2 6 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 389 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 654 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 414 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 378 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 398 bp overlap
ChIP SK-N-SH ENCFF285GEQ 206 bp overlap
JUND 1 dataset
ChIP SK-N-SH ENCSR000BSK.JUND.SK-N-SH 121 bp overlap
KDM1A 5 datasets
ChIP NCI-H526_DMSO GSE66297.KDM1A.NCI-H526_DMSO 150 bp overlap
ChIP SH-SY5Y_B0 GSE58258.KDM1A.SH-SY5Y_B0 316 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 213 bp overlap
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 238 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 461 bp overlap
Lhx3 1 dataset
Motif DE_36h DE_36h-Lhx3_MA0135.2 12 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 426 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 357 bp overlap
MYC 1 dataset
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 108 bp overlap
MYCN 5 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 275 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 339 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 88 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 654 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 259 bp overlap
MYOD1 1 dataset
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
Mafg 1 dataset
Motif DE_36h DE_36h-Mafg_MA0659.4 12 bp overlap
NCOR2 1 dataset
ChIP AML_shaml1-eto GSE131939.NCOR2.AML_shaml1-eto 166 bp overlap
NFIC 2 datasets
ChIP SK-N-SH ENCFF965AKM 274 bp overlap
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 208 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 277 bp overlap
OTX1 1 dataset
Motif DE_36h DE_36h-OTX1_MA0711.2 6 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 288 bp overlap
PDX1 4 datasets
ChIP hESC GSE58685.PDX1.hESC 203 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 308 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 152 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 402 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 170 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 227 bp overlap
PITX1 1 dataset
Motif DE_36h DE_36h-PITX1_MA0682.3 6 bp overlap
PITX2 1 dataset
Motif DE_36h DE_36h-PITX2_MA1547.2 8 bp overlap
PITX3 2 datasets
Motif DE_36h DE_36h-PITX3_MA0714.2 6 bp overlap
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 646 bp overlap
POLR2A 1 dataset
ChIP adrenal gland ENCFF843OBJ 313 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 279 bp overlap
PPARA 1 dataset
ChIP SK-N-SH ENCFF446HWC 261 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 228 bp overlap
RARA 1 dataset
ChIP hiPSC_D5 GSE132532.RARA.hiPSC_D5 501 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 313 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 417 bp overlap
RHOXF1 1 dataset
Motif DE_36h DE_36h-RHOXF1_MA0719.2 6 bp overlap
SIX2 3 datasets
ChIP HEK GSE73865.SIX2.HEK 382 bp overlap
ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 167 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 333 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 181 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 452 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 578 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 452 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 324 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 439 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 654 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 534 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 199 bp overlap
SMARCA4 2 datasets
ChIP 501-mel_SHSOX10 GSE61965.SMARCA4.501-mel_SHSOX10 146 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 478 bp overlap
SNAI2 2 datasets
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR106GVM.SNAI2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 146 bp overlap
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 165 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 364 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 332 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 437 bp overlap
SP5 1 dataset
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
STAT3 1 dataset
ChIP HCC70_EtOH GSE85579.STAT3.HCC70_EtOH 78 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 269 bp overlap
TAL1 3 datasets
ChIP K-562 GSE107726.TAL1.K-562 209 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 207 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 173 bp overlap
TBX2 2 datasets
ChIP Kelly GSE94822.TBX2.Kelly 556 bp overlap
ChIP SK-N-BE2-C GSE94822.TBX2.SK-N-BE2-C 350 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 302 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 215 bp overlap
TEAD4 2 datasets
ChIP BE2C GSE84389.TEAD4.BE2C 279 bp overlap
ChIP SK-N-BE2 GSE84389.TEAD4.SK-N-BE2 279 bp overlap
TFAP2A 2 datasets
ChIP WA09 GSE105081.TFAP2A.WA09 345 bp overlap
ChIP WA09 GSE105081.TFAP2A.WA09 94 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 197 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 297 bp overlap
TRIM28 6 datasets
ChIP HEK293 ENCFF265CEM 618 bp overlap
ChIP HEK293 ENCFF582MWI 644 bp overlap
ChIP HEK293 ENCFF582MWI 432 bp overlap
ChIP HEK293 ENCSR618HNF.TRIM28.HEK293 220 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 599 bp overlap
ChIP U2OS ENCSR000EYC.TRIM28.U2OS 233 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 319 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 479 bp overlap
YY1 3 datasets
ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 654 bp overlap
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 654 bp overlap
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 130 bp overlap
ZBTB17 1 dataset
ChIP HEK293 ENCFF865LIO 487 bp overlap
ZFP14 1 dataset
Motif DE_36h DE_36h-ZFP14_MA1972.1 15 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 88 bp overlap
ZNF317 1 dataset
ChIP HEK293 GSE76494.ZNF317.HEK293 84 bp overlap
ZXDB 1 dataset
ChIP HEK293 ENCSR559IOZ.ZXDB.HEK293 631 bp overlap