chr11 : 14,350,233 – 14,350,559
326 bp 90 TFs 1 linked gene
This 326 bp open chromatin element is linked to RRAS2 and is bound by 90 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RRAS2 8.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:14,345,233 – 14,355,559
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
Ascl2 2 datasets
Motif DE_12h DE_12h-Ascl2_MA0816.1 10 bp overlap
Motif ES_0h ES_0h-Ascl2_MA0816.1 10 bp overlap
BCL6B 3 datasets
Motif DE_12h DE_12h-BCL6B_MA0731.1 17 bp overlap
Motif DE_24h DE_24h-BCL6B_MA0731.1 17 bp overlap
Motif ES_0h ES_0h-BCL6B_MA0731.1 17 bp overlap
CHD1 1 dataset
ChIP H1 ENCFF998XEK 109 bp overlap
DUX4 2 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif ES_0h ES_0h-DUX4_MA0468.1 11 bp overlap
ETS1 2 datasets
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 248 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.ETS1.CTV-1_DSG_SPI1-mut 272 bp overlap
ETV2::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap
Motif ES_0h ES_0h-ETV2FIGLA_MA1941.2 13 bp overlap
ETV5::FIGLA 2 datasets
Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap
Motif ES_0h ES_0h-ETV5FIGLA_MA1945.2 14 bp overlap
EWSR1-FLI1 3 datasets
Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif DE_24h DE_24h-EWSR1-FLI1_MA0149.1 18 bp overlap
Motif ES_0h ES_0h-EWSR1-FLI1_MA0149.1 18 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
FLI1 1 dataset
ChIP CTV-1_DSG_SPI1-mut GSE128835.FLI1.CTV-1_DSG_SPI1-mut 205 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 141 bp overlap
GLIS3 2 datasets
Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap
Motif ES_0h ES_0h-GLIS3_MA0737.1 14 bp overlap
GRHL2 3 datasets
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
Motif DE_24h DE_24h-GRHL2_MA1105.3 8 bp overlap
Motif ES_0h ES_0h-GRHL2_MA1105.3 8 bp overlap
HAND2 2 datasets
Motif DE_12h DE_12h-HAND2_MA1638.2 6 bp overlap
Motif ES_0h ES_0h-HAND2_MA1638.2 6 bp overlap
HDAC2 1 dataset
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 204 bp overlap
HIC2 2 datasets
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
Motif ES_0h ES_0h-HIC2_MA0738.2 6 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 289 bp overlap
HNF1A 3 datasets
Motif DE_12h DE_12h-HNF1A_MA0046.3 13 bp overlap
Motif DE_24h DE_24h-HNF1A_MA0046.3 13 bp overlap
Motif ES_0h ES_0h-HNF1A_MA0046.3 13 bp overlap
HOXC11 3 datasets
Motif DE_12h DE_12h-HOXC11_MA0651.3 11 bp overlap
Motif DE_24h DE_24h-HOXC11_MA0651.3 11 bp overlap
Motif ES_0h ES_0h-HOXC11_MA0651.3 11 bp overlap
HOXC12 3 datasets
Motif DE_12h DE_12h-HOXC12_MA0906.2 10 bp overlap
Motif DE_24h DE_24h-HOXC12_MA0906.2 10 bp overlap
Motif ES_0h ES_0h-HOXC12_MA0906.2 10 bp overlap
HOXD11 3 datasets
Motif DE_12h DE_12h-HOXD11_MA0908.2 9 bp overlap
Motif DE_24h DE_24h-HOXD11_MA0908.2 9 bp overlap
Motif ES_0h ES_0h-HOXD11_MA0908.2 9 bp overlap
IKZF2 5 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif DE_24h DE_24h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
Isl1 2 datasets
Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap
Motif ES_0h ES_0h-Isl1_MA1608.2 7 bp overlap
KLF13 3 datasets
Motif DE_12h DE_12h-KLF13_MA0657.2 17 bp overlap
Motif DE_24h DE_24h-KLF13_MA0657.2 17 bp overlap
Motif ES_0h ES_0h-KLF13_MA0657.2 17 bp overlap
KLF14 3 datasets
Motif DE_12h DE_12h-KLF14_MA0740.2 9 bp overlap
Motif DE_24h DE_24h-KLF14_MA0740.2 9 bp overlap
Motif ES_0h ES_0h-KLF14_MA0740.2 9 bp overlap
KLF16 3 datasets
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
Motif DE_24h DE_24h-KLF16_MA0741.1 11 bp overlap
Motif ES_0h ES_0h-KLF16_MA0741.1 11 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_24h DE_24h-KLF5_MA0599.1 10 bp overlap
Motif ES_0h ES_0h-KLF5_MA0599.1 10 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 86 bp overlap
Lhx3 2 datasets
Motif DE_12h DE_12h-Lhx3_MA0135.2 12 bp overlap
Motif ES_0h ES_0h-Lhx3_MA0135.2 12 bp overlap
MAX 7 datasets
ChIP H1 ENCFF601FOM 253 bp overlap
ChIP H1 ENCFF914VQY 310 bp overlap
ChIP K-562 ENCSR000EFV.MAX.K-562 120 bp overlap
ChIP K562 ENCFF524IJO 289 bp overlap
ChIP NB4 ENCFF966MWB 270 bp overlap
ChIP NB4 ENCSR000EHS.MAX.NB4 121 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 169 bp overlap
MEIS1 4 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif DE_12h DE_12h-MEIS1_MA1639.2 9 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA1639.2 9 bp overlap
MEIS2 2 datasets
Motif DE_12h DE_12h-MEIS2_MA1640.2 9 bp overlap
Motif ES_0h ES_0h-MEIS2_MA1640.2 9 bp overlap
MEIS3 2 datasets
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
Motif ES_0h ES_0h-MEIS3_MA0775.2 7 bp overlap
MGA 1 dataset
Motif DE_12h DE_12h-MGA_MA0801.1 8 bp overlap
MSANTD3 3 datasets
Motif DE_12h DE_12h-MSANTD3_MA1523.2 7 bp overlap
Motif DE_24h DE_24h-MSANTD3_MA1523.2 7 bp overlap
Motif ES_0h ES_0h-MSANTD3_MA1523.2 7 bp overlap
MTF1 3 datasets
Motif DE_12h DE_12h-MTF1_MA0863.1 14 bp overlap
Motif DE_24h DE_24h-MTF1_MA0863.1 14 bp overlap
Motif ES_0h ES_0h-MTF1_MA0863.1 14 bp overlap
MXI1 7 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif DE_24h DE_24h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap
ChIP H1 ENCFF963FZS 300 bp overlap
MYOD1 2 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 195 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 152 bp overlap
MZF1 2 datasets
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
Motif ES_0h ES_0h-MZF1_MA0056.3 8 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 313 bp overlap
NKX6-3 2 datasets
Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap
Motif ES_0h ES_0h-NKX6-3_MA1530.2 8 bp overlap
NR1H4::RXRA 2 datasets
Motif DE_12h DE_12h-NR1H4RXRA_MA1146.2 13 bp overlap
Motif ES_0h ES_0h-NR1H4RXRA_MA1146.2 13 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
OSR2 2 datasets
Motif DE_12h DE_12h-OSR2_MA1646.2 8 bp overlap
Motif ES_0h ES_0h-OSR2_MA1646.2 8 bp overlap
PATZ1 2 datasets
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
Motif DE_12h DE_12h-PATZ1_MA1961.2 11 bp overlap
PLAG1 2 datasets
Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap
Motif ES_0h ES_0h-PLAG1_MA0163.1 14 bp overlap
PRDM1 1 dataset
ChIP fetal_testis GSE100639.PRDM1.fetal_testis 155 bp overlap
Ptf1A 2 datasets
Motif DE_12h DE_12h-Ptf1A_MA1618.2 9 bp overlap
Motif ES_0h ES_0h-Ptf1A_MA1618.2 9 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif ES_0h ES_0h-RARA_MA0729.1 18 bp overlap
RXRA::VDR 2 datasets
Motif DE_12h DE_12h-RXRAVDR_MA0074.1 15 bp overlap
Motif ES_0h ES_0h-RXRAVDR_MA0074.1 15 bp overlap
SATB1 3 datasets
Motif DE_12h DE_12h-SATB1_MA1963.2 7 bp overlap
Motif DE_24h DE_24h-SATB1_MA1963.2 7 bp overlap
Motif ES_0h ES_0h-SATB1_MA1963.2 7 bp overlap
SIN3A 3 datasets
ChIP H1 ENCFF042ZSL 326 bp overlap
ChIP H1 ENCFF896IJG 284 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 125 bp overlap
SMARCA4 7 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 303 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 317 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 306 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 288 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 290 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 285 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 289 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 226 bp overlap
SP1 2 datasets
Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 163 bp overlap
SP3 3 datasets
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
Motif DE_24h DE_24h-SP3_MA0746.3 11 bp overlap
Motif ES_0h ES_0h-SP3_MA0746.3 11 bp overlap
SP4 3 datasets
Motif DE_12h DE_12h-SP4_MA0685.2 9 bp overlap
Motif DE_24h DE_24h-SP4_MA0685.2 9 bp overlap
Motif ES_0h ES_0h-SP4_MA0685.2 9 bp overlap
SP5 5 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
Motif ES_0h ES_0h-SP5_MA1965.2 6 bp overlap
SP8 3 datasets
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
Motif DE_24h DE_24h-SP8_MA0747.2 11 bp overlap
Motif ES_0h ES_0h-SP8_MA0747.2 11 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 199 bp overlap
ChIP CTV-1_delA GSE128835.SPI1.CTV-1_delA 229 bp overlap
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 255 bp overlap
Spi1 3 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif DE_24h DE_24h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
TAF7 1 dataset
ChIP H1 ENCFF061XZZ 260 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX15 1 dataset
Motif DE_12h DE_12h-TBX15_MA0803.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX5 1 dataset
Motif DE_12h DE_12h-TBX5_MA0807.1 8 bp overlap
TFAP4 3 datasets
Motif DE_12h DE_12h-TFAP4_MA1570.1 10 bp overlap
Motif DE_24h DE_24h-TFAP4_MA1570.1 10 bp overlap
Motif ES_0h ES_0h-TFAP4_MA1570.1 10 bp overlap
TFAP4::ETV1 2 datasets
Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap
Motif ES_0h ES_0h-TFAP4ETV1_MA1966.2 13 bp overlap
THAP1 2 datasets
Motif DE_12h DE_12h-THAP1_MA0597.3 8 bp overlap
Motif ES_0h ES_0h-THAP1_MA0597.3 8 bp overlap
THRA 3 datasets
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
Motif DE_24h DE_24h-THRA_MA1969.2 18 bp overlap
Motif ES_0h ES_0h-THRA_MA1969.2 18 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
USF1 13 datasets
Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap
Motif DE_24h DE_24h-USF1_MA0093.4 10 bp overlap
Motif ES_0h ES_0h-USF1_MA0093.4 10 bp overlap
ChIP H1 ENCFF090WVU 163 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 91 bp overlap
ChIP HepG2 ENCFF201JKA 305 bp overlap
ChIP Ishikawa ENCFF728IEG 258 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 104 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 215 bp overlap
ChIP K562 ENCFF633EZB 260 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 122 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 316 bp overlap
ChIP WTC11 ENCFF699QGS 326 bp overlap
USF2 5 datasets
ChIP GM12878 GSE97661.USF2.GM12878 154 bp overlap
ChIP H1 ENCFF434EDF 271 bp overlap
ChIP Hep-G2 GSE97661.USF2.Hep-G2 151 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 126 bp overlap
ChIP WTC11 ENCFF139JAW 159 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 267 bp overlap
Wt1 1 dataset
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
ZBTB24 2 datasets
Motif DE_12h DE_12h-ZBTB24_MA2330.1 10 bp overlap
Motif ES_0h ES_0h-ZBTB24_MA2330.1 10 bp overlap
ZIC1 3 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap
Motif ES_0h ES_0h-ZIC1_MA0696.1 14 bp overlap
ZIC4 3 datasets
Motif DE_12h DE_12h-ZIC4_MA0751.2 14 bp overlap
Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap
Motif ES_0h ES_0h-ZIC4_MA0751.2 14 bp overlap
ZNF148 1 dataset
Motif DE_12h DE_12h-ZNF148_MA1653.2 10 bp overlap
ZNF281 2 datasets
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap
ZNF417 3 datasets
Motif DE_12h DE_12h-ZNF417_MA1727.2 7 bp overlap
Motif DE_24h DE_24h-ZNF417_MA1727.2 7 bp overlap
Motif ES_0h ES_0h-ZNF417_MA1727.2 7 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF547 3 datasets
Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap
Motif DE_24h DE_24h-ZNF547_MA2334.1 13 bp overlap
Motif ES_0h ES_0h-ZNF547_MA2334.1 13 bp overlap
ZNF667 3 datasets
Motif DE_12h DE_12h-ZNF667_MA1984.2 11 bp overlap
Motif DE_24h DE_24h-ZNF667_MA1984.2 11 bp overlap
Motif ES_0h ES_0h-ZNF667_MA1984.2 11 bp overlap
ZNF677 1 dataset
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
ZNF740 1 dataset
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Zic1::Zic2 3 datasets
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Motif DE_24h DE_24h-Zic1Zic2_MA1628.2 7 bp overlap
Motif ES_0h ES_0h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 3 datasets
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Motif ES_0h ES_0h-Zic2_MA1629.2 9 bp overlap
Zic3 3 datasets
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap
Motif ES_0h ES_0h-Zic3_MA0697.3 7 bp overlap
Huangfu Lab · Publications · Resources · Contact