chr11 : 8,242,003 8,242,678
675 bp 101 TFs 0 linked genes
This 675 bp open chromatin element has no linked target genes and is bound by 101 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:8,237,003 – 8,247,678
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
101 transcription factors
Source
Cell type
ASH2L 3 datasets
ChIP H1 ENCFF399KAM 632 bp overlap
ChIP H1 ENCFF399KAM 422 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 571 bp overlap
BCOR 1 dataset
ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 173 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 419 bp overlap
BRD4 6 datasets
ChIP BE2C GSE80151.BRD4.BE2C 286 bp overlap
ChIP COLO-741 GSE73319.BRD4.COLO-741 150 bp overlap
ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 286 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 145 bp overlap
ChIP retina_AB1-FW20 GSE86981.BRD4.retina_AB1-FW20 235 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 194 bp overlap
CHD1 1 dataset
ChIP hMSC-TERT_osteoblast GSE89179.CHD1.hMSC-TERT_osteoblast 196 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 196 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 442 bp overlap
CTCF 12 datasets
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H9 ENCFF152GTF 426 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 129 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 179 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 137 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 161 bp overlap
ChIP endodermal cell ENCFF471YCZ 448 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 394 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 302 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 127 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP neuroblastoma GSE115862.CTCF.neuroblastoma 307 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 339 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 289 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 200 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 171 bp overlap
ESR1 1 dataset
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 102 bp overlap
EZH2 1 dataset
ChIP neural progenitor cell ENCFF472NFV 675 bp overlap
FERD3L 1 dataset
Motif DE_36h DE_36h-FERD3L_MA1485.1 14 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 269 bp overlap
ChIP DE DE-FOXA2-2 395 bp overlap
GATA2 1 dataset
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 273 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 362 bp overlap
ChIP DE DE-GATA4-2 665 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 446 bp overlap
ChIP DE DE-GATA6-2 675 bp overlap
Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 522 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 603 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 589 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 675 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 675 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 593 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 539 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 673 bp overlap
Gata3 1 dataset
Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap
HAND2 3 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 343 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 125 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 151 bp overlap
Hnf1A 1 dataset
Motif DE_36h DE_36h-Hnf1A_MA1991.2 10 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 113 bp overlap
JARID2 2 datasets
ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 215 bp overlap
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 401 bp overlap
JUN 6 datasets
ChIP DE_D1 S13-DE-d1-JUN-exp1 330 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 340 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 569 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 297 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 445 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 332 bp overlap
KDM1A 1 dataset
ChIP H1 ENCFF696SGD 505 bp overlap
KLF9 1 dataset
ChIP GBM1A GSE62211.KLF9.GBM1A 100 bp overlap
KMT2C 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2C.BIN-67_lentivirus-SMARCA4 138 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 76 bp overlap
MAFF 1 dataset
Motif DE_36h DE_36h-MAFF_MA0495.4 11 bp overlap
MAX 2 datasets
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 108 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 55 bp overlap
MED1 1 dataset
ChIP NCI-H2171 GSE36354.MED1.NCI-H2171 61 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MEIS2 1 dataset
Motif DE_36h DE_36h-MEIS2_MA0774.1 8 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 51 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 267 bp overlap
ChIP Kelly GSE94782.MYCN.Kelly 95 bp overlap
ChIP NB-1643 GSE94782.MYCN.NB-1643 177 bp overlap
Mafb 1 dataset
Motif DE_36h DE_36h-Mafb_MA0117.3 11 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 330 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 429 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 186 bp overlap
NEUROG2 4 datasets
ChIP MRC-5_NFD_02DPT GSE75910.NEUROG2.MRC-5_NFD_02DPT 153 bp overlap
ChIP MRC-5_NFD_1DPT GSE75910.NEUROG2.MRC-5_NFD_1DPT 159 bp overlap
ChIP MRC-5_N_02DPT GSE75910.NEUROG2.MRC-5_N_02DPT 137 bp overlap
ChIP MRC-5_N_1DPT GSE75910.NEUROG2.MRC-5_N_1DPT 163 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 132 bp overlap
NRL 1 dataset
Motif DE_36h DE_36h-NRL_MA0842.3 12 bp overlap
PAX3-FOXO1 1 dataset
ChIP Hs-352-Sk_PAX3-FOXO1-vector GSE83725.PAX3-FOXO1.Hs-352-Sk_PAX3-FOXO1-vector 284 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 157 bp overlap
POU2F2 1 dataset
Motif DE_36h DE_36h-POU2F2_MA0507.3 13 bp overlap
POU3F2 1 dataset
Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap
POU5F1 5 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 282 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 399 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 599 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 260 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 148 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 520 bp overlap
PRDM9 1 dataset
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Prdm15 1 dataset
Motif DE_36h DE_36h-Prdm15_MA1616.2 11 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 131 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 402 bp overlap
REST 1 dataset
ChIP SK-N-SH ENCFF861MKH 136 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 274 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 675 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 675 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 675 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 675 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 675 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 675 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 675 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 675 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 243 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 190 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 272 bp overlap
SMARCA4 4 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 391 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 74 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 210 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 428 bp overlap
SMARCC1 2 datasets
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 529 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 323 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 498 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 579 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 134 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 71 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 178 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 178 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 124 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 204 bp overlap
SP4 1 dataset
ChIP WA01 ENCSR000BQV.SP4.WA01 149 bp overlap
SP5 2 datasets
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap
SUZ12 2 datasets
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 143 bp overlap
ChIP CRL-7250_shSS18-SSX GSE108025.SUZ12.CRL-7250_shSS18-SSX 50 bp overlap
T 1 dataset
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 232 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 147 bp overlap
TBX20 1 dataset
Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap
TCF3 1 dataset
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 309 bp overlap
TCF4 3 datasets
ChIP SH-SY5Y GSE96915.TCF4.SH-SY5Y 167 bp overlap
ChIP SK-N-SH ENCFF270OWF 140 bp overlap
ChIP SK-N-SH ENCFF270OWF 54 bp overlap
TCF7L1 1 dataset
Motif DE_36h DE_36h-TCF7L1_MA1421.1 12 bp overlap
TCF7L2 1 dataset
Motif DE_36h DE_36h-TCF7L2_MA0523.2 9 bp overlap
TFAP2A 3 datasets
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap
Motif DE_36h DE_36h-TFAP2A_MA0872.1 13 bp overlap
TFAP2B 4 datasets
Motif DE_36h DE_36h-TFAP2B_MA0811.2 11 bp overlap
Motif DE_36h DE_36h-TFAP2B_MA0812.2 9 bp overlap
Motif DE_36h DE_36h-TFAP2B_MA0813.1 13 bp overlap
ChIP SK-N-SH ENCFF869XXQ 509 bp overlap
TFAP2C 5 datasets
Motif DE_36h DE_36h-TFAP2C_MA0524.3 11 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap
Motif DE_36h DE_36h-TFAP2C_MA0815.1 13 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 675 bp overlap
TFAP2E 1 dataset
Motif DE_36h DE_36h-TFAP2E_MA1569.2 9 bp overlap
TRPS1 1 dataset
Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 246 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 499 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 478 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 478 bp overlap
Thap11 1 dataset
Motif DE_36h DE_36h-Thap11_MA1573.2 14 bp overlap
XRCC5 1 dataset
ChIP K-562 GSE120104.XRCC5.K-562 146 bp overlap
YY1 4 datasets
ChIP H1 ENCFF524BTL 335 bp overlap
ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 238 bp overlap
ChIP NT2/D1 ENCFF999MII 317 bp overlap
ChIP WA01 ENCSR000BKD.YY1.WA01 312 bp overlap
ZNF213 1 dataset
Motif DE_36h DE_36h-ZNF213_MA2121.1 12 bp overlap
ZNF257 1 dataset
Motif DE_36h DE_36h-ZNF257_MA1710.2 10 bp overlap
ZNF281 1 dataset
Motif DE_36h DE_36h-ZNF281_MA1630.3 10 bp overlap
ZNF354A 1 dataset
Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap
ZNF460 1 dataset
Motif DE_36h DE_36h-ZNF460_MA1596.1 16 bp overlap
ZNF677 1 dataset
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
ZNF770 1 dataset
ChIP HEK293 GSE76494.ZNF770.HEK293 163 bp overlap
Zfp335 1 dataset
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Znf423 1 dataset
Motif DE_36h DE_36h-Znf423_MA0116.1 15 bp overlap