chr10 : 10,938,714 – 10,939,585
871 bp 122 TFs 1 linked gene
This 871 bp open chromatin element is linked to CELF2 and is bound by 122 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
CELF2 78.9 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:10,933,714 – 10,944,585
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
122 transcription factors
Source
Cell type
ALX3 1 dataset
Motif DE_48h DE_48h-ALX3_MA0634.2 6 bp overlap
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 152 bp overlap
ARGFX 1 dataset
Motif DE_48h DE_48h-ARGFX_MA1463.2 8 bp overlap
ATF2 3 datasets
Motif DE_48h DE_48h-ATF2_MA1632.2 10 bp overlap
Motif DE_60h DE_60h-ATF2_MA1632.2 10 bp overlap
Motif DE_72h DE_72h-ATF2_MA1632.2 10 bp overlap
BRD4 2 datasets
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 384 bp overlap
ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 206 bp overlap
Bcl11B 1 dataset
Motif DE_48h DE_48h-Bcl11B_MA1989.2 9 bp overlap
CHD4 2 datasets
ChIP RH5 GSE155861.CHD4.RH5 280 bp overlap
ChIP SCMC GSE155861.CHD4.SCMC 467 bp overlap
CHD8 1 dataset
ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 215 bp overlap
CREB1 3 datasets
Motif DE_48h DE_48h-CREB1_MA0018.5 8 bp overlap
Motif DE_60h DE_60h-CREB1_MA0018.5 8 bp overlap
Motif DE_72h DE_72h-CREB1_MA0018.5 8 bp overlap
CTCF 2 datasets
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 280 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 96 bp overlap
DMRTA2 4 datasets
Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_48h DE_48h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap
Motif DE_72h DE_72h-DMRTA2_MA1478.2 6 bp overlap
DRGX 1 dataset
Motif DE_48h DE_48h-DRGX_MA1481.2 6 bp overlap
DUX4 4 datasets
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_72h DE_72h-DUX4_MA0468.1 11 bp overlap
EMX1 1 dataset
Motif DE_48h DE_48h-EMX1_MA0612.3 6 bp overlap
EMX2 1 dataset
Motif DE_48h DE_48h-EMX2_MA0886.2 6 bp overlap
EN1 1 dataset
Motif DE_48h DE_48h-EN1_MA0027.3 6 bp overlap
EN2 1 dataset
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 164 bp overlap
ERG 1 dataset
ChIP SKNO-1 GSE23730.ERG.SKNO-1 203 bp overlap
ESR1 1 dataset
ChIP MCF-7_PaPE-1_OA GSE93510.ESR1.MCF-7_PaPE-1_OA 269 bp overlap
ESRRB 3 datasets
Motif DE_48h DE_48h-ESRRB_MA0141.4 10 bp overlap
Motif DE_60h DE_60h-ESRRB_MA0141.4 10 bp overlap
Motif DE_72h DE_72h-ESRRB_MA0141.4 10 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 195 bp overlap
ESX1 1 dataset
Motif DE_48h DE_48h-ESX1_MA0644.3 7 bp overlap
EVX1 1 dataset
Motif DE_48h DE_48h-EVX1_MA0887.2 6 bp overlap
EVX2 1 dataset
Motif DE_48h DE_48h-EVX2_MA0888.2 6 bp overlap
Esrrg 3 datasets
Motif DE_48h DE_48h-Esrrg_MA0643.2 9 bp overlap
Motif DE_60h DE_60h-Esrrg_MA0643.2 9 bp overlap
Motif DE_72h DE_72h-Esrrg_MA0643.2 9 bp overlap
FEZF2 3 datasets
Motif DE_48h DE_48h-FEZF2_MA2341.1 8 bp overlap
Motif DE_60h DE_60h-FEZF2_MA2341.1 8 bp overlap
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FOSB::JUN 3 datasets
Motif DE_48h DE_48h-FOSBJUN_MA1127.1 11 bp overlap
Motif DE_60h DE_60h-FOSBJUN_MA1127.1 11 bp overlap
Motif DE_72h DE_72h-FOSBJUN_MA1127.1 11 bp overlap
FOSL2::JUN 3 datasets
Motif DE_48h DE_48h-FOSL2JUN_MA1131.2 10 bp overlap
Motif DE_60h DE_60h-FOSL2JUN_MA1131.2 10 bp overlap
Motif DE_72h DE_72h-FOSL2JUN_MA1131.2 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 617 bp overlap
ChIP DE DE-FOXA2-2 502 bp overlap
FOXO1-PAX3 1 dataset
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 186 bp overlap
GATA4 9 datasets
ChIP DE DE-GATA4-1 763 bp overlap
ChIP DE DE-GATA4-2 766 bp overlap
Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_72h DE_72h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 434 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 288 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 304 bp overlap
GATA5 4 datasets
Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
Motif DE_72h DE_72h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 754 bp overlap
ChIP DE DE-GATA6-2 761 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 272 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 292 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 345 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 672 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 270 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 373 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 488 bp overlap
ChIP foregut GSE117136.GATA6.foregut 509 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 410 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 356 bp overlap
GBX1 1 dataset
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
GSX1 1 dataset
Motif DE_48h DE_48h-GSX1_MA0892.2 6 bp overlap
GSX2 1 dataset
Motif DE_48h DE_48h-GSX2_MA0893.3 7 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 131 bp overlap
HDAC2 2 datasets
ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 354 bp overlap
ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 329 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 206 bp overlap
HOXA1 1 dataset
Motif DE_48h DE_48h-HOXA1_MA1495.2 6 bp overlap
HOXA2 1 dataset
Motif DE_48h DE_48h-HOXA2_MA0900.3 6 bp overlap
HOXA3 1 dataset
Motif DE_48h DE_48h-HOXA3_MA2119.1 7 bp overlap
HOXB1 1 dataset
Motif DE_48h DE_48h-HOXB1_MA2093.1 7 bp overlap
HOXB2 1 dataset
Motif DE_48h DE_48h-HOXB2_MA0902.3 6 bp overlap
HOXB3 1 dataset
Motif DE_48h DE_48h-HOXB3_MA0903.2 6 bp overlap
HOXB5 1 dataset
Motif DE_48h DE_48h-HOXB5_MA0904.3 6 bp overlap
HOXC8 1 dataset
Motif DE_48h DE_48h-HOXC8_MA1505.2 6 bp overlap
HOXD3 1 dataset
Motif DE_48h DE_48h-HOXD3_MA0912.2 8 bp overlap
ISX 1 dataset
Motif DE_48h DE_48h-ISX_MA0654.2 6 bp overlap
JUN 5 datasets
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
Motif DE_72h DE_72h-JUN_MA0488.2 10 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 357 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 275 bp overlap
JUN::JUNB 3 datasets
Motif DE_48h DE_48h-JUNJUNB_MA1133.2 11 bp overlap
Motif DE_60h DE_60h-JUNJUNB_MA1133.2 11 bp overlap
Motif DE_72h DE_72h-JUNJUNB_MA1133.2 11 bp overlap
JUNB 3 datasets
Motif DE_48h DE_48h-JUNB_MA1140.3 11 bp overlap
Motif DE_60h DE_60h-JUNB_MA1140.3 11 bp overlap
Motif DE_72h DE_72h-JUNB_MA1140.3 11 bp overlap
JUND 3 datasets
Motif DE_48h DE_48h-JUND_MA0492.2 11 bp overlap
Motif DE_60h DE_60h-JUND_MA0492.2 11 bp overlap
Motif DE_72h DE_72h-JUND_MA0492.2 11 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 262 bp overlap
LBX1 1 dataset
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
LHX5 1 dataset
Motif DE_48h DE_48h-LHX5_MA1519.2 7 bp overlap
LHX6 1 dataset
Motif DE_48h DE_48h-LHX6_MA0658.2 8 bp overlap
LHX9 1 dataset
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
LMX1A 1 dataset
Motif DE_48h DE_48h-LMX1A_MA0702.3 7 bp overlap
LMX1B 1 dataset
Motif DE_48h DE_48h-LMX1B_MA0703.3 8 bp overlap
Lhx1 1 dataset
Motif DE_48h DE_48h-Lhx1_MA1518.3 10 bp overlap
Lhx4 1 dataset
Motif DE_48h DE_48h-Lhx4_MA0704.2 6 bp overlap
Lhx8 1 dataset
Motif DE_48h DE_48h-Lhx8_MA0705.2 6 bp overlap
MEIS1 3 datasets
Motif DE_48h DE_48h-MEIS1_MA0498.3 5 bp overlap
Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
MEOX1 1 dataset
Motif DE_48h DE_48h-MEOX1_MA0661.2 7 bp overlap
MEOX2 1 dataset
Motif DE_48h DE_48h-MEOX2_MA0706.2 7 bp overlap
MIXL1 1 dataset
Motif DE_48h DE_48h-MIXL1_MA0662.2 6 bp overlap
MNX1 1 dataset
Motif DE_48h DE_48h-MNX1_MA0707.3 6 bp overlap
MTA2 1 dataset
ChIP RH4 GSE155861.MTA2.RH4 377 bp overlap
MTF1 3 datasets
Motif DE_48h DE_48h-MTF1_MA0863.1 14 bp overlap
Motif DE_60h DE_60h-MTF1_MA0863.1 14 bp overlap
Motif DE_72h DE_72h-MTF1_MA0863.1 14 bp overlap
MYOD1 3 datasets
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 254 bp overlap
ChIP RH4 GSE83726.MYOD1.RH4 294 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 292 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 248 bp overlap
NFKBIA 1 dataset
ChIP dermal GSE30082.NFKBIA.dermal 296 bp overlap
NKX6-2 1 dataset
Motif DE_48h DE_48h-NKX6-2_MA0675.2 6 bp overlap
NOTO 1 dataset
Motif DE_48h DE_48h-NOTO_MA0710.2 7 bp overlap
NR2C1 3 datasets
Motif DE_48h DE_48h-NR2C1_MA1535.2 6 bp overlap
Motif DE_60h DE_60h-NR2C1_MA1535.2 6 bp overlap
Motif DE_72h DE_72h-NR2C1_MA1535.2 6 bp overlap
NR2C2 3 datasets
Motif DE_48h DE_48h-NR2C2_MA1536.2 6 bp overlap
Motif DE_60h DE_60h-NR2C2_MA1536.2 6 bp overlap
Motif DE_72h DE_72h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 3 datasets
Motif DE_48h DE_48h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_60h DE_60h-Nr1H2_MA1996.2 6 bp overlap
Motif DE_72h DE_72h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 3 datasets
Motif DE_48h DE_48h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_60h DE_60h-Nr1H4_MA1110.3 6 bp overlap
Motif DE_72h DE_72h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 3 datasets
Motif DE_48h DE_48h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_60h DE_60h-Nr1h3_MA2337.1 6 bp overlap
Motif DE_72h DE_72h-Nr1h3_MA2337.1 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 359 bp overlap
PDX1 1 dataset
Motif DE_48h DE_48h-PDX1_MA0132.3 6 bp overlap
POU3F3 1 dataset
Motif DE_48h DE_48h-POU3F3_MA0788.1 13 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 192 bp overlap
POU6F1 1 dataset
Motif DE_48h DE_48h-POU6F1_MA0628.2 6 bp overlap
POU6F2 1 dataset
Motif DE_48h DE_48h-POU6F2_MA0793.2 9 bp overlap
PRRX1 1 dataset
Motif DE_48h DE_48h-PRRX1_MA0716.2 6 bp overlap
PRRX2 1 dataset
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP RH4 GSE83726.RAD21.RH4 307 bp overlap
RARA 6 datasets
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0730.1 17 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0730.1 17 bp overlap
Motif DE_72h DE_72h-RARA_MA0729.1 18 bp overlap
Motif DE_72h DE_72h-RARA_MA0730.1 17 bp overlap
RARA::RXRA 3 datasets
Motif DE_48h DE_48h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_60h DE_60h-RARARXRA_MA0159.1 17 bp overlap
Motif DE_72h DE_72h-RARARXRA_MA0159.1 17 bp overlap
RARA::RXRG 3 datasets
Motif DE_48h DE_48h-RARARXRG_MA1149.2 17 bp overlap
Motif DE_60h DE_60h-RARARXRG_MA1149.2 17 bp overlap
Motif DE_72h DE_72h-RARARXRG_MA1149.2 17 bp overlap
RAX2 1 dataset
Motif DE_48h DE_48h-RAX2_MA0717.2 6 bp overlap
RBBP4 2 datasets
ChIP RH5 GSE155861.RBBP4.RH5 339 bp overlap
ChIP SCMC GSE155861.RBBP4.SCMC 419 bp overlap
RREB1 1 dataset
Motif DE_48h DE_48h-RREB1_MA0073.2 19 bp overlap
Rarb 3 datasets
Motif DE_48h DE_48h-Rarb_MA0858.1 17 bp overlap
Motif DE_60h DE_60h-Rarb_MA0858.1 17 bp overlap
Motif DE_72h DE_72h-Rarb_MA0858.1 17 bp overlap
SHOX 1 dataset
Motif DE_48h DE_48h-SHOX_MA0630.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 593 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 675 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 709 bp overlap
SOX15 4 datasets
Motif DE_36h DE_36h-SOX15_MA1152.2 7 bp overlap
Motif DE_48h DE_48h-SOX15_MA1152.2 7 bp overlap
Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap
Motif DE_72h DE_72h-SOX15_MA1152.2 7 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 515 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 870 bp overlap
SP1 2 datasets
Motif DE_60h DE_60h-SP1_MA0079.5 9 bp overlap
Motif DE_72h DE_72h-SP1_MA0079.5 9 bp overlap
SP2 2 datasets
Motif DE_60h DE_60h-SP2_MA0516.3 9 bp overlap
Motif DE_72h DE_72h-SP2_MA0516.3 9 bp overlap
SP5 2 datasets
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
Motif DE_72h DE_72h-SP5_MA1965.2 6 bp overlap
Shox2 1 dataset
Motif DE_48h DE_48h-Shox2_MA0720.2 6 bp overlap
Sox6 1 dataset
Motif DE_48h DE_48h-Sox6_MA0515.1 10 bp overlap
THAP1 3 datasets
Motif DE_48h DE_48h-THAP1_MA0597.3 8 bp overlap
Motif DE_60h DE_60h-THAP1_MA0597.3 8 bp overlap
Motif DE_72h DE_72h-THAP1_MA0597.3 8 bp overlap
THRB 3 datasets
Motif DE_48h DE_48h-THRB_MA1576.2 18 bp overlap
Motif DE_60h DE_60h-THRB_MA1576.2 18 bp overlap
Motif DE_72h DE_72h-THRB_MA1576.2 18 bp overlap
TLX2 1 dataset
Motif DE_48h DE_48h-TLX2_MA1577.2 6 bp overlap
UNCX 1 dataset
Motif DE_48h DE_48h-UNCX_MA0721.2 6 bp overlap
VAX1 1 dataset
Motif DE_48h DE_48h-VAX1_MA0722.2 7 bp overlap
VAX2 1 dataset
Motif DE_48h DE_48h-VAX2_MA0723.3 6 bp overlap
VSX1 1 dataset
Motif DE_48h DE_48h-VSX1_MA0725.2 7 bp overlap
VSX2 1 dataset
Motif DE_48h DE_48h-VSX2_MA0726.2 7 bp overlap
YY1 1 dataset
ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 173 bp overlap
ZEB1 1 dataset
ChIP neuron_bipolar_doxy_4d ENCSR418KUS.ZEB1.neuron_bipolar_doxy_4d 174 bp overlap
ZNF460 3 datasets
Motif DE_48h DE_48h-ZNF460_MA1596.1 16 bp overlap
Motif DE_60h DE_60h-ZNF460_MA1596.1 16 bp overlap
Motif DE_72h DE_72h-ZNF460_MA1596.1 16 bp overlap
ZNF684 4 datasets
Motif DE_36h DE_36h-ZNF684_MA1600.2 14 bp overlap
Motif DE_48h DE_48h-ZNF684_MA1600.2 14 bp overlap
Motif DE_60h DE_60h-ZNF684_MA1600.2 14 bp overlap
Motif DE_72h DE_72h-ZNF684_MA1600.2 14 bp overlap
ZSCAN21 1 dataset
Motif DE_48h DE_48h-ZSCAN21_MA2336.1 7 bp overlap
mix-a 1 dataset
Motif DE_48h DE_48h-mix-a_MA0621.2 7 bp overlap
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