chr9 : 91,061,677 91,062,488
811 bp 90 TFs 2 linked genes
This 811 bp open chromatin element is linked to LINC02937 and AUH and is bound by 90 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
LINC02937 45.9 kb Distal Multiome
AUH 299.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:91,056,677 – 91,067,488
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
90 transcription factors
Source
Cell type
ARID5B 1 dataset
ChIP HepG2 ENCFF964FWK 184 bp overlap
BCL6 1 dataset
ChIP HepG2 ENCFF423EJH 97 bp overlap
BRCA1 1 dataset
ChIP MCF-10A GSE40591.BRCA1.MCF-10A 294 bp overlap
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 231 bp overlap
BRD4 2 datasets
ChIP MV4-11_SGC GSE71776.BRD4.MV4-11_SGC 174 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 117 bp overlap
CEBPA 2 datasets
ChIP Hep-G2 ERP000209.CEBPA.Hep-G2 71 bp overlap
ChIP HepG2 ENCFF175DFS 84 bp overlap
CEBPB 4 datasets
ChIP HeLa-S3 ENCFF722WEG 94 bp overlap
ChIP HepG2 ENCFF074JWB 71 bp overlap
ChIP HepG2 ENCFF536NTI 101 bp overlap
ChIP K562 ENCFF584CTB 287 bp overlap
CEBPG 1 dataset
ChIP HepG2 ENCFF503XBC 138 bp overlap
DMAP1 1 dataset
ChIP HepG2 ENCFF247MSU 691 bp overlap
E2F6 2 datasets
ChIP HeLa-S3 ENCSR000EVK.E2F6.HeLa-S3 142 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 75 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 107 bp overlap
ELF1 1 dataset
ChIP Hep-G2 ENCSR321VGW.ELF1.Hep-G2 136 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 121 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 114 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 420 bp overlap
ChIP hESC GSE26097.EOMES.hESC 146 bp overlap
EP300 1 dataset
ChIP neural ENCSR843ZUP.EP300.neural 226 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 389 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap
FOXA3 1 dataset
ChIP HepG2 ENCFF005KGL 154 bp overlap
FOXC1 1 dataset
ChIP HepG2 ENCFF882ISP 333 bp overlap
FOXK1 1 dataset
ChIP Hep-G2 ENCSR603BJQ.FOXK1.Hep-G2 146 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 480 bp overlap
ChIP DE DE-GATA4-2 631 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 449 bp overlap
ChIP DE DE-GATA6-2 445 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 482 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 755 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 764 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 666 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 777 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 712 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 449 bp overlap
GATAD2A 1 dataset
ChIP HepG2 ENCFF252XNH 194 bp overlap
HBP1 2 datasets
ChIP HepG2 ENCFF512UDH 445 bp overlap
ChIP HepG2 ENCFF512UDH 258 bp overlap
HIF1A 1 dataset
ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 262 bp overlap
HLF 1 dataset
ChIP HepG2 ENCFF854JLR 100 bp overlap
JMJD1C 1 dataset
ChIP THP-1 GSE63484.JMJD1C.THP-1 117 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 269 bp overlap
KDM3A 1 dataset
ChIP Hep-G2 ENCSR387JKT.KDM3A.Hep-G2 183 bp overlap
KLF16 2 datasets
ChIP HepG2 ENCFF969FFI 565 bp overlap
ChIP HepG2 ENCFF969FFI 383 bp overlap
KLF6 1 dataset
ChIP Hep-G2 ENCSR757EKM.KLF6.Hep-G2 148 bp overlap
KMT2A 1 dataset
ChIP MV4-11 GSE79899.KMT2A.MV4-11 234 bp overlap
MAFG 1 dataset
ChIP K562 ENCFF455EEO 97 bp overlap
MAFK 1 dataset
ChIP A549 ENCFF371EPR 92 bp overlap
MAX 13 datasets
ChIP HeLa-S3 ENCFF398RFF 193 bp overlap
ChIP HeLa-S3 ENCSR000ECN.MAX.HeLa-S3 109 bp overlap
ChIP HeLa-S3 ENCSR000EZF.MAX.HeLa-S3 72 bp overlap
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 161 bp overlap
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 118 bp overlap
ChIP HepG2 ENCFF479OHI 126 bp overlap
ChIP HepG2 ENCFF507HCX 141 bp overlap
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 188 bp overlap
ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 165 bp overlap
ChIP liver ENCFF092GVW 270 bp overlap
ChIP liver ENCFF584QGB 220 bp overlap
ChIP liver ENCSR847DIT.MAX.liver 192 bp overlap
ChIP liver ENCSR521IID.MAX.liver 89 bp overlap
MED1 2 datasets
ChIP Hep-G2 ENCSR959XNY.MED1.Hep-G2 96 bp overlap
ChIP HepG2 ENCFF495TSS 220 bp overlap
MEIS1 1 dataset
Motif DE_24h DE_24h-MEIS1_MA0498.3 5 bp overlap
MGA 1 dataset
ChIP HepG2 ENCFF057YJE 380 bp overlap
MXD4 1 dataset
ChIP Hep-G2 ENCSR441KFW.MXD4.Hep-G2 230 bp overlap
MYC 3 datasets
ChIP HeLa-S3 ENCSR000EZD.MYC.HeLa-S3 74 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 81 bp overlap
ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 170 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 143 bp overlap
NFATC3 1 dataset
Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap
NKX2-4 1 dataset
Motif DE_24h DE_24h-NKX2-4_MA2003.2 8 bp overlap
NKX2-8 1 dataset
Motif DE_24h DE_24h-NKX2-8_MA0673.2 8 bp overlap
Nfatc1 1 dataset
Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap
Nkx2-1 1 dataset
Motif DE_24h DE_24h-Nkx2-1_MA1994.2 7 bp overlap
PHIP 2 datasets
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 201 bp overlap
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 226 bp overlap
POLR2A 4 datasets
ChIP gastrocnemius medialis ENCFF081DTE 400 bp overlap
ChIP gastrocnemius medialis ENCFF145VIB 159 bp overlap
ChIP sigmoid colon ENCFF748YVT 262 bp overlap
ChIP upper lobe of left lung ENCFF199JUI 294 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 477 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 559 bp overlap
PRDM1 1 dataset
Motif DE_36h DE_36h-PRDM1_MA0508.4 7 bp overlap
RAD21 2 datasets
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 107 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 241 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 250 bp overlap
ChIP liver ENCFF807CIA 83 bp overlap
RXRB 1 dataset
ChIP HepG2 ENCFF539ZAY 405 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 569 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 756 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 724 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 514 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 542 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 724 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 598 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 689 bp overlap
SMAD3 1 dataset
ChIP Hep-G2 ENCSR005GZH.SMAD3.Hep-G2 123 bp overlap
SMARCC1 2 datasets
ChIP DE_D1 S15-DE-d1-BAF155-exp1 306 bp overlap
ChIP HeLa-S3 ENCSR000EDM.SMARCC1.HeLa-S3 179 bp overlap
SNAI2 1 dataset
ChIP RD GSE137168.SNAI2.RD 326 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 86 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 244 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 504 bp overlap
SP1 2 datasets
ChIP Hep-G2 ENCSR460YAM.SP1.Hep-G2 66 bp overlap
ChIP liver ENCFF597LFJ 228 bp overlap
SPI1 3 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 130 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 113 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 135 bp overlap
SSRP1 1 dataset
ChIP HepG2 ENCFF540BLL 191 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 79 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 314 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 552 bp overlap
TFE3 1 dataset
ChIP Hep-G2 ENCSR589SNT.TFE3.Hep-G2 154 bp overlap
THAP11 1 dataset
ChIP HepG2 ENCFF272SWH 243 bp overlap
THRB 2 datasets
ChIP Hep-G2 ENCSR430JGJ.THRB.Hep-G2 129 bp overlap
ChIP HepG2 ENCFF476INC 210 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 52 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 83 bp overlap
YY1 1 dataset
ChIP Huh-7 GSE97411.YY1.Huh-7 212 bp overlap
ZFX 1 dataset
ChIP HepG2 ENCFF016NZF 345 bp overlap
ZFY 2 datasets
ChIP Hep-G2 ENCSR949OEV.ZFY.Hep-G2 157 bp overlap
ChIP HepG2 ENCFF106ELT 343 bp overlap
ZGPAT 1 dataset
ChIP Hep-G2 ENCSR704IGU.ZGPAT.Hep-G2 180 bp overlap
ZKSCAN1 1 dataset
ChIP HepG2 ENCFF578KDY 97 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 148 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 84 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 88 bp overlap
ZNF687 1 dataset
ChIP HepG2 ENCFF653WIX 484 bp overlap