chr1 : 167,791,182 167,791,821
639 bp 97 TFs 5 linked genes
This 639 bp open chromatin element is linked to 5 target genes and is bound by 97 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
MPZL1 69.5 kb Distal Multiome+HiCAR
ADCY10 122.7 kb Distal Multiome
MPC2 144.5 kb Distal Multiome
DCAF6 145.1 kb Distal Multiome
CREG1 237.8 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:167,786,182 – 167,796,821
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
97 transcription factors
Source
Cell type
AR 1 dataset
ChIP THP-1_R1881 GSE131381.AR.THP-1_R1881 167 bp overlap
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 253 bp overlap
BAP1 1 dataset
ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 115 bp overlap
BRD4 4 datasets
ChIP HCC1395 GSE63581.BRD4.HCC1395 130 bp overlap
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 155 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 236 bp overlap
ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 189 bp overlap
CEBPA 7 datasets
ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 136 bp overlap
ChIP THP-1_1-25D_24h GSE124032.CEBPA.THP-1_1-25D_24h 53 bp overlap
ChIP THP-1_1-25D_2h GSE124032.CEBPA.THP-1_1-25D_2h 75 bp overlap
ChIP THP-1_1-25D_8h GSE124032.CEBPA.THP-1_1-25D_8h 208 bp overlap
ChIP THP-1_EtOH_24h GSE124032.CEBPA.THP-1_EtOH_24h 53 bp overlap
ChIP THP-1_EtOH_2h GSE124032.CEBPA.THP-1_EtOH_2h 125 bp overlap
ChIP THP-1_EtOH_8h GSE124032.CEBPA.THP-1_EtOH_8h 57 bp overlap
CEBPB 1 dataset
ChIP HFOB_DIFF GSE82295.CEBPB.HFOB_DIFF 108 bp overlap
CREBBP 1 dataset
ChIP fibroblast_proliferating GSE106146.CREBBP.fibroblast_proliferating 64 bp overlap
CTCF 6 datasets
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 289 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 225 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 213 bp overlap
ChIP brain ENCFF163BBN 57 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 120 bp overlap
ChIP omental-fat-pad ENCSR225OKX.CTCF.omental-fat-pad 208 bp overlap
Cebpa 8 datasets
ChIP BLaER1 ENCFF093OYK 629 bp overlap
ChIP BLaER1 ENCFF274GAT 141 bp overlap
ChIP BLaER1 ENCFF364PUR 220 bp overlap
ChIP BLaER1 ENCFF399AYC 187 bp overlap
ChIP BLaER1 ENCFF460KDD 426 bp overlap
ChIP BLaER1 ENCFF508JZF 60 bp overlap
ChIP BLaER1 ENCFF844FIP 452 bp overlap
ChIP BLaER1 ENCFF896HSY 298 bp overlap
E2F8 1 dataset
ChIP K-562 ENCSR953DVM.E2F8.K-562 51 bp overlap
EBF1 1 dataset
ChIP NALM-6 GSE126300.EBF1.NALM-6 248 bp overlap
EGR1 1 dataset
ChIP macrophage_D4 GSE136216.EGR1.macrophage_D4 84 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 276 bp overlap
ERG 1 dataset
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 237 bp overlap
ESR1 2 datasets
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 187 bp overlap
ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 570 bp overlap
ETS1 1 dataset
ChIP CTV-1_DSG GSE128835.ETS1.CTV-1_DSG 191 bp overlap
FERD3L 1 dataset
Motif DE_36h DE_36h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif DE_36h DE_36h-FIGLA_MA0820.2 6 bp overlap
FLI1 3 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 237 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 68 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 183 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 534 bp overlap
ChIP DE DE-FOXA2-2 501 bp overlap
GATA2 1 dataset
ChIP SKH1 GSE87283.GATA2.SKH1 200 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 538 bp overlap
ChIP DE DE-GATA4-2 524 bp overlap
ChIP foregut GSE117136.GATA4.foregut 272 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 501 bp overlap
ChIP DE DE-GATA6-2 456 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 332 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 268 bp overlap
ChIP foregut GSE117136.GATA6.foregut 263 bp overlap
HDGF 1 dataset
ChIP K-562 ENCSR197ALX.HDGF.K-562 248 bp overlap
HMBOX1 3 datasets
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
Motif DE_36h DE_36h-HMBOX1_MA0895.2 7 bp overlap
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 149 bp overlap
HMGB2 1 dataset
ChIP IMR-90_proliferating GSE98245.HMGB2.IMR-90_proliferating 218 bp overlap
HNF1A 1 dataset
ChIP HEE_1 GSE76376.HNF1A.HEE_1 90 bp overlap
JMJD1C 3 datasets
ChIP HL-60 GSE63484.JMJD1C.HL-60 194 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 168 bp overlap
ChIP THP-1 GSE63484.JMJD1C.THP-1 264 bp overlap
JUNB 4 datasets
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 185 bp overlap
ChIP K-562 ENCSR795IYP.JUNB.K-562 129 bp overlap
ChIP K562 ENCFF785CFE 240 bp overlap
ChIP hESC ENCSR917MAH.JUNB.hESC 159 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 159 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 410 bp overlap
KLF4 1 dataset
ChIP HAP1 GSE130417.KLF4.HAP1 308 bp overlap
KMT2A 3 datasets
ChIP L826 GSE83671.KMT2A.L826 333 bp overlap
ChIP MV4-11 GSE79899.KMT2A.MV4-11 204 bp overlap
ChIP THP-1 GSE79899.KMT2A.THP-1 337 bp overlap
KMT2B 1 dataset
ChIP AML GSE112074.KMT2B.AML 295 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 266 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 232 bp overlap
MED 1 dataset
ChIP SEM GSE83671.MED.SEM 275 bp overlap
MED1 11 datasets
ChIP U-87MG GSE36354.MED1.U-87MG 291 bp overlap
ChIP hMSC-TERT4_4h GSE104537.MED1.hMSC-TERT4_4h 95 bp overlap
ChIP hMSC-TERT4_D14 GSE104537.MED1.hMSC-TERT4_D14 106 bp overlap
ChIP hMSC-TERT4_D3 GSE104537.MED1.hMSC-TERT4_D3 94 bp overlap
ChIP hMSC-TERT4_adipocyte-4H GSE113253.MED1.hMSC-TERT4_adipocyte-4H 88 bp overlap
ChIP hMSC-TERT4_adipocyte-D1 GSE113253.MED1.hMSC-TERT4_adipocyte-D1 78 bp overlap
ChIP hMSC-TERT4_adipocyte-D14 GSE113253.MED1.hMSC-TERT4_adipocyte-D14 130 bp overlap
ChIP hMSC-TERT4_adipocyte-D7 GSE113253.MED1.hMSC-TERT4_adipocyte-D7 106 bp overlap
ChIP hMSC-TERT4_osteoblast-4H GSE113253.MED1.hMSC-TERT4_osteoblast-4H 115 bp overlap
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 171 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 131 bp overlap
MEIS1 2 datasets
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap
MRTFA 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFA.A-673-clone-Asp114 249 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 407 bp overlap
MYB 1 dataset
ChIP THP-1 GSE90769.MYB.THP-1 233 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 384 bp overlap
MYF5 1 dataset
ChIP Rh18 GSE84628.MYF5.Rh18 121 bp overlap
MYOD1 1 dataset
Motif DE_36h DE_36h-MYOD1_MA0499.3 9 bp overlap
NCAPH2 2 datasets
ChIP IMR-90_Triptolide-5min GSE118494.NCAPH2.IMR-90_Triptolide-5min 283 bp overlap
ChIP IMR-90_alpha-amanitin-1H GSE118494.NCAPH2.IMR-90_alpha-amanitin-1H 107 bp overlap
NIPBL 1 dataset
ChIP HEK293T_CRISPR-2 GSE122299.NIPBL.HEK293T_CRISPR-2 147 bp overlap
NR2F1 1 dataset
Motif DE_36h DE_36h-NR2F1_MA1537.2 13 bp overlap
NR2F2 1 dataset
ChIP uterus_STROMA_ENDOMETRIUM GSE52008.NR2F2.uterus_STROMA_ENDOMETRIUM 53 bp overlap
Nr2f6 1 dataset
Motif DE_36h DE_36h-Nr2f6_MA0677.2 13 bp overlap
PBX1 1 dataset
ChIP RCH-ACV GSE85988.PBX1.RCH-ACV 266 bp overlap
PGR 1 dataset
ChIP myometrium_NP2 GSE137550.PGR.myometrium_NP2 62 bp overlap
PKNOX2 1 dataset
Motif DE_36h DE_36h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 1 dataset
ChIP vagina ENCFF384GAB 121 bp overlap
PPARD 1 dataset
Motif DE_36h DE_36h-PPARD_MA1550.2 14 bp overlap
PPARG 2 datasets
ChIP ASC GSE21366.PPARG.ASC 69 bp overlap
ChIP SGBS GSE41629.PPARG.SGBS 95 bp overlap
PRDM14 1 dataset
ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 235 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 451 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 476 bp overlap
ChIP IMR-90 ENCSR000EFJ.RAD21.IMR-90 112 bp overlap
RBM22 1 dataset
ChIP HepG2 ENCFF292RVQ 337 bp overlap
RELA 1 dataset
ChIP SGBS GSE64233.RELA.SGBS 149 bp overlap
RUNX1 4 datasets
ChIP NB4 GSE81992.RUNX1.NB4 226 bp overlap
ChIP SKH1_10d GSE87283.RUNX1.SKH1_10d 168 bp overlap
ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 302 bp overlap
ChIP SKNO-1 GSE23730.RUNX1.SKNO-1 293 bp overlap
RXRB 1 dataset
Motif DE_36h DE_36h-RXRB_MA0855.1 14 bp overlap
RXRG 1 dataset
Motif DE_36h DE_36h-RXRG_MA0856.1 14 bp overlap
Rxra 1 dataset
Motif DE_36h DE_36h-Rxra_MA0512.2 14 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 328 bp overlap
SMARCA2 2 datasets
ChIP NPC_AM GSE122631.SMARCA2.NPC_AM 142 bp overlap
ChIP NPC_K755R-pos GSE122631.SMARCA2.NPC_K755R-pos 261 bp overlap
SMARCA4 3 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 333 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 368 bp overlap
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 196 bp overlap
SNAI2 1 dataset
Motif DE_36h DE_36h-SNAI2_MA0745.3 8 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 412 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 598 bp overlap
SPI1 5 datasets
ChIP CTV-1_delQ GSE128835.SPI1.CTV-1_delQ 273 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 265 bp overlap
ChIP NB4 GSE128834.SPI1.NB4 302 bp overlap
ChIP macrophage_D7_donorP GSE128834.SPI1.macrophage_D7_donorP 283 bp overlap
ChIP primary-monocyte_18h_donorO GSE128834.SPI1.primary-monocyte_18h_donorO 278 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 119 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 360 bp overlap
SUPT5H 1 dataset
ChIP HEK293_PNUTS GSE134198.SUPT5H.HEK293_PNUTS 391 bp overlap
SUPT6H 1 dataset
ChIP HCT-116_Inhibitor GSE130509.SUPT6H.HCT-116_Inhibitor 211 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 200 bp overlap
TCF3 3 datasets
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 89 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 89 bp overlap
ChIP RCH-ACV GSE85988.TCF3.RCH-ACV 329 bp overlap
TEAD1 1 dataset
ChIP adipocyte GSE140782.TEAD1.adipocyte 78 bp overlap
TGIF1 1 dataset
Motif DE_36h DE_36h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_36h DE_36h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_36h DE_36h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_36h DE_36h-TGIF2LY_MA1572.1 12 bp overlap
USF1 1 dataset
Motif DE_36h DE_36h-USF1_MA0093.4 10 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 126 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 222 bp overlap
ZEB1 1 dataset
Motif DE_36h DE_36h-ZEB1_MA0103.4 6 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 228 bp overlap
ZNF300 1 dataset
ChIP HEK293T GSE78099.ZNF300.HEK293T 296 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap