MPC2
mitochondrial pyruvate carrier 2 | DKFZP564B167, SLC54A2, BRP44
MPC2 — as a Regulated Gene

TFs regulating MPC2 0 TFs

Transcription factors with Perturb-seq knockdown data for MPC2. The Binding column indicates whether any binding evidence exists for this TF–gene pair (ChIP-seq or motif footprint peaks). The Mean coef is the average Perturb-seq regression coefficient across active gRNAs (positive = MPC2 upregulated upon KD; negative = downregulated). The Outlier column indicates whether this gene is in the top or bottom 5% of all TF knockdown effects.

Data: Effect:
TF Mean coef Binding Outlier TF→Gene link

Elements linked to MPC2

Open chromatin peaks (ATAC-seq) in the genomic neighbourhood of MPC2, linked by TSS proximity or chromatin conformation (Multiome / HiCAR). Each element overlaps at least one TF ChIP-seq binding site — the TFs column shows how many distinct TFs bind that element.

Accessibility Element Dist. to TSS Link type TFs
chr1:167,713,429–167,715,919 220.4 kb Distal (>10kb) Multiome 1144
chr1:167,716,321–167,716,922 219.4 kb Distal (>10kb) Multiome 279
chr1:167,721,587–167,722,654 214.1 kb Distal (>10kb) Multiome HiCAR 729
chr1:167,735,321–167,736,296 200.2 kb Distal (>10kb) Multiome 106
chr1:167,791,182–167,791,821 144.5 kb Distal (>10kb) Multiome 97
chr1:167,803,184–167,803,921 132.6 kb Distal (>10kb) Multiome 643
chr1:167,819,954–167,820,473 115.7 kb Distal (>10kb) Multiome 410
chr1:167,822,319–167,822,995 113.4 kb Distal (>10kb) Multiome 107
chr1:167,856,829–167,857,439 78.8 kb Distal (>10kb) Multiome 62
chr1:167,935,207–167,937,689 300 bp At TSS Multiome 1086
chr1:168,082,150–168,082,782 146.4 kb Distal (>10kb) Multiome 282
chr1:168,135,686–168,137,665 200.9 kb Distal (>10kb) Multiome 557
chr1:168,145,525–168,146,368 209.9 kb Distal (>10kb) Multiome 327
chr1:168,146,489–168,147,203 210.9 kb Distal (>10kb) Multiome 155
chr1:168,178,414–168,179,583 242.9 kb Distal (>10kb) Multiome 940
chr1:168,187,044–168,187,988 251.4 kb Distal (>10kb) Multiome 107
chr1:168,225,447–168,226,729 289.9 kb Distal (>10kb) Multiome 1005

Genome Browser

Genomic view of the MPC2 locus showing ATAC-seq accessibility and RNA-seq expression across the ESC → DE time course, together with TF binding peaks and element-to-TSS loop connections.

chr1:167,703,429 – 168,236,729
Proximal 1 kb Distal 10 kb Multiome HiCAR ATAC-seq RNA-seq