chr8 : 28,513,832 28,514,052
220 bp 82 TFs 0 linked genes
This 220 bp open chromatin element has no linked target genes and is bound by 82 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:28,508,832 – 28,519,052
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
82 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 117 bp overlap
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 164 bp overlap
BCL11A 2 datasets
ChIP HUDEP-2_90min GSE104676.BCL11A.HUDEP-2_90min 98 bp overlap
ChIP WA01 ENCSR000BMJ.BCL11A.WA01 152 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 80 bp overlap
BMI1 1 dataset
ChIP GM12878 ENCSR469WII.BMI1.GM12878 220 bp overlap
BRD4 6 datasets
ChIP GM15850_DMSO GSE99402.BRD4.GM15850_DMSO 56 bp overlap
ChIP GM15850_Syn-TEF1 GSE99402.BRD4.GM15850_Syn-TEF1 56 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 182 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 170 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 160 bp overlap
ChIP hESC GSE33281.BRD4.hESC 62 bp overlap
CBX2 1 dataset
ChIP K-562 ENCSR000ATU.CBX2.K-562 220 bp overlap
CHD2 1 dataset
ChIP H1 ENCFF991MKH 182 bp overlap
CHD7 3 datasets
ChIP WA01 ENCSR000AVA.CHD7.WA01 220 bp overlap
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 220 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 220 bp overlap
CIITA 1 dataset
ChIP Raji_AB1 GSE52941.CIITA.Raji_AB1 178 bp overlap
COMMD3-BMI1,BMI1 1 dataset
ChIP GM12878 ENCFF249AMT 220 bp overlap
CREB1 1 dataset
ChIP GM12878 ENCFF870CVH 206 bp overlap
CTCF 1 dataset
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 107 bp overlap
EP300 3 datasets
ChIP WA01 ENCSR000BKK.EP300.WA01 183 bp overlap
ChIP neural ENCSR843ZUP.EP300.neural 220 bp overlap
ChIP neural cell ENCFF442QNK 220 bp overlap
ESR1 3 datasets
ChIP Ishikawa ENCSR000BKL.ESR1.Ishikawa 183 bp overlap
ChIP Ishikawa ENCSR000BQR.ESR1.Ishikawa 179 bp overlap
ChIP Ishikawa ENCSR000BIY.ESR1.Ishikawa 172 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 219 bp overlap
FOSL2 1 dataset
ChIP NPC GSE122631.FOSL2.NPC 220 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 220 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 148 bp overlap
GRHL2 1 dataset
Motif DE_12h DE_12h-GRHL2_MA1105.3 8 bp overlap
HDAC2 3 datasets
ChIP H1 ENCFF353UJQ 220 bp overlap
ChIP H1 ENCFF939VKA 220 bp overlap
ChIP WA01 ENCSR000BNR.HDAC2.WA01 184 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 220 bp overlap
IKZF3 1 dataset
ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 98 bp overlap
JUNB 1 dataset
ChIP GM12878 ENCSR897MMC.JUNB.GM12878 151 bp overlap
KDM1A 1 dataset
ChIP OCI-Ly1_si GSE107920.KDM1A.OCI-Ly1_si 96 bp overlap
KMT2A 1 dataset
ChIP HEK293T_N-term_C104 GSE90762.KMT2A.HEK293T_N-term_C104 220 bp overlap
MAX 3 datasets
ChIP H1 ENCFF601FOM 220 bp overlap
ChIP P493-6 GSE36354.MAX.P493-6 203 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 220 bp overlap
MED1 1 dataset
ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 220 bp overlap
MEF2B 1 dataset
ChIP DLBCL GSE110682.MEF2B.DLBCL 107 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
MXI1 1 dataset
ChIP H1 ENCFF963FZS 220 bp overlap
MYNN 3 datasets
ChIP HEK293 ENCFF897QZG 220 bp overlap
ChIP HEK293 ENCSR707BNG.MYNN.HEK293 214 bp overlap
ChIP HEK293 GSE76494.MYNN.HEK293 169 bp overlap
MYOG 1 dataset
ChIP RH4_Entinostat-6H GSE116344.MYOG.RH4_Entinostat-6H 89 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 220 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 220 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 220 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 220 bp overlap
NFKB2 1 dataset
ChIP L1236 GSE63736.NFKB2.L1236 107 bp overlap
NOTCH1 1 dataset
ChIP HPBALL GSE39263.NOTCH1.HPBALL 220 bp overlap
NR3C1 1 dataset
ChIP A-549 ENCSR000BHE.NR3C1.A-549 142 bp overlap
Nr2e3 2 datasets
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
Motif ES_0h ES_0h-Nr2e3_MA0164.2 6 bp overlap
PAX5 2 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 107 bp overlap
ChIP NALM-6 GSE126300.PAX5.NALM-6 193 bp overlap
PBX3 2 datasets
ChIP GM12878 ENCFF285BQQ 195 bp overlap
ChIP GM12878 ENCSR000BGR.PBX3.GM12878 138 bp overlap
PKNOX1 4 datasets
ChIP GM12878 ENCFF589FCY 220 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 220 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 207 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 199 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 163 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 213 bp overlap
POU5F1 5 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 220 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 217 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 128 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 220 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 220 bp overlap
PRDM1 2 datasets
ChIP HEK293 ENCFF302TBP 146 bp overlap
ChIP HEK293 GSE76494.PRDM1.HEK293 128 bp overlap
PRDM6 1 dataset
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 220 bp overlap
RAD21 4 datasets
ChIP HAP1 GSE126634.RAD21.HAP1 220 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 220 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 220 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 220 bp overlap
RARA 2 datasets
ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 220 bp overlap
ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 220 bp overlap
RBPJ 1 dataset
ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 220 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 220 bp overlap
RFX1 8 datasets
ChIP K-562 ENCSR968GIB.RFX1.K-562 220 bp overlap
ChIP K-562 ENCSR041AXL.RFX1.K-562 220 bp overlap
ChIP K562 ENCFF421AVO 220 bp overlap
ChIP K562 ENCFF809XVG 220 bp overlap
ChIP MCF-7 ENCFF782EZS 220 bp overlap
ChIP MCF-7 ENCFF973QAD 204 bp overlap
ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 220 bp overlap
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 220 bp overlap
RFX5 4 datasets
ChIP GM12878 ENCFF768MIX 220 bp overlap
ChIP H1 ENCFF605EGG 220 bp overlap
ChIP SK-N-SH ENCFF755HLO 220 bp overlap
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 174 bp overlap
RFX7 2 datasets
Motif DE_12h DE_12h-RFX7_MA1554.2 8 bp overlap
Motif ES_0h ES_0h-RFX7_MA1554.2 8 bp overlap
RNF2 2 datasets
ChIP K-562 ENCSR820GND.RNF2.K-562 220 bp overlap
ChIP K-562 ENCSR076YPO.RNF2.K-562 108 bp overlap
Rfx6 2 datasets
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
Motif ES_0h ES_0h-Rfx6_MA1724.2 9 bp overlap
SAP30 1 dataset
ChIP WA01 ENCSR000ATR.SAP30.WA01 196 bp overlap
SIN3A 6 datasets
ChIP H1 ENCFF042ZSL 220 bp overlap
ChIP H1 ENCFF896IJG 220 bp overlap
ChIP WA01 ENCSR000BIS.SIN3A.WA01 190 bp overlap
ChIP WA01 ENCSR000EBO.SIN3A.WA01 183 bp overlap
ChIP hiPSC_IB12 GSE106870.SIN3A.hiPSC_IB12 169 bp overlap
ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 144 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 112 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SMARCA2 1 dataset
ChIP NPC_R1159Q_AM GSE122631.SMARCA2.NPC_R1159Q_AM 220 bp overlap
SMARCA4 8 datasets
ChIP 501-mel_SHCTR GSE61965.SMARCA4.501-mel_SHCTR 60 bp overlap
ChIP BT-16_Dox GSE71504.SMARCA4.BT-16_Dox 220 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 150 bp overlap
ChIP K-562 ENCSR643VTW.SMARCA4.K-562 169 bp overlap
ChIP NPC GSE122631.SMARCA4.NPC 174 bp overlap
ChIP WA09_heat-shock GSE105028.SMARCA4.WA09_heat-shock 210 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 151 bp overlap
SMARCC1 2 datasets
ChIP hiPSC GSE124903.SMARCC1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 220 bp overlap
SOX2 14 datasets
ChIP H9 GSE46837.SOX2.H9 212 bp overlap
ChIP HNSC GSE69479.SOX2.HNSC 220 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 105 bp overlap
ChIP NPC GSE122631.SOX2.NPC 220 bp overlap
ChIP RENVM GSE49404.SOX2.RENVM 220 bp overlap
ChIP RENVM_SHSOX2 GSE49404.SOX2.RENVM_SHSOX2 145 bp overlap
ChIP hESC GSE69479.SOX2.hESC 220 bp overlap
ChIP hESC GSE18292.SOX2.hESC 103 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 220 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 217 bp overlap
ChIP hiPSC_3s2 GSE81899.SOX2.hiPSC_3s2 102 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 220 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 220 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 220 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 220 bp overlap
SOX3 1 dataset
ChIP NPC GSE122631.SOX3.NPC 215 bp overlap
SP1 2 datasets
ChIP H1 ENCFF263FUH 220 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 212 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 75 bp overlap
STAT3 1 dataset
ChIP OCI-Ly7 GSE50723.STAT3.OCI-Ly7 156 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 167 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 139 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 183 bp overlap
TERF1 1 dataset
ChIP LCL GSE55053.TERF1.LCL 122 bp overlap
TERF2 1 dataset
ChIP LCL GSE55053.TERF2.LCL 208 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 220 bp overlap
YY1 1 dataset
ChIP K-562 ENCSR000BKU.YY1.K-562 158 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 191 bp overlap
ZNF223 1 dataset
ChIP HEK293 ENCFF408UAU 220 bp overlap
ZNF341 2 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif ES_0h ES_0h-ZNF341_MA1655.2 8 bp overlap
ZNF449 2 datasets
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
Motif ES_0h ES_0h-ZNF449_MA1656.2 10 bp overlap
ZNF585A 1 dataset
ChIP HEK293T GSE78099.ZNF585A.HEK293T 200 bp overlap